RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 TMEM70Q9BUB7 260 aa9.54□□□□□ -0.88
ATG4B-218ENST00000479554 DAZ3Q9NR90 486 aaKnown RBP9.54□□□□□ -0.88
ATG4B-218ENST00000479554 TRAV26-2A0A0B4J265 109 aa9.53□□□□□ -0.88
ATG4B-218ENST00000479554 PRSS47A8MTI9 375 aa9.53□□□□□ -0.88
ATG4B-218ENST00000479554 GAS8-AS1O95177 125 aa9.53□□□□□ -0.88
ATG4B-218ENST00000479554 HAMPP81172 84 aa9.53□□□□□ -0.88
ATG4B-218ENST00000479554 FAM19A2Q8N3H0 131 aa9.53□□□□□ -0.88
ATG4B-218ENST00000479554 NXT2Q9NPJ8 142 aaKnown RBP9.53□□□□□ -0.88
ATG4B-218ENST00000479554 SMR3BP02814 79 aaPredicted RBP9.52□□□□□ -0.89
ATG4B-218ENST00000479554 INAFM2P0DMQ5 153 aa9.52□□□□□ -0.89
ATG4B-218ENST00000479554 JOSD1Q15040 202 aaPredicted RBP9.52□□□□□ -0.89
ATG4B-218ENST00000479554 C12orf57Q99622 126 aa9.52□□□□□ -0.89
ATG4B-218ENST00000479554 C20orf78Q9BR46 151 aa9.52□□□□□ -0.89
ATG4B-218ENST00000479554 SRRM2Q9UQ35 2752 aaKnown RBP9.52□□□□□ -0.89
ATG4B-218ENST00000479554 HERC1Q15751 4861 aa9.51□□□□□ -0.89
ATG4B-218ENST00000479554 IGHV1-24A0A0C4DH33 117 aa9.51□□□□□ -0.89
ATG4B-218ENST00000479554 TRBV10-1A0A0K0K1A3 114 aa9.51□□□□□ -0.89
ATG4B-218ENST00000479554 LINC01546A6NGU7 62 aa9.51□□□□□ -0.89
ATG4B-218ENST00000479554 F5H697 171 aa9.51□□□□□ -0.89
ATG4B-218ENST00000479554 RPL36AP83881 106 aaKnown RBP9.51□□□□□ -0.89
ATG4B-218ENST00000479554 WFDC2Q14508 124 aa9.51□□□□□ -0.89
ATG4B-218ENST00000479554 PYY3Q5JQD4 70 aa9.51□□□□□ -0.89
ATG4B-218ENST00000479554 SUMO4Q6EEV6 95 aa9.51□□□□□ -0.89
ATG4B-218ENST00000479554 Q8N8P6 123 aa9.51□□□□□ -0.89
ATG4B-218ENST00000479554 RPL36ALQ969Q0 106 aaKnown RBP9.51□□□□□ -0.89
ATG4B-218ENST00000479554 LECT2O14960 151 aa9.5□□□□□ -0.89
ATG4B-218ENST00000479554 SUMO2P61956 95 aaKnown RBP9.5□□□□□ -0.89
ATG4B-218ENST00000479554 ZNF56Q15929 161 aa9.5□□□□□ -0.89
ATG4B-218ENST00000479554 RMI2Q96E14 147 aa9.5□□□□□ -0.89
ATG4B-218ENST00000479554 COX11Q9Y6N1 276 aa9.5□□□□□ -0.89
ATG4B-218ENST00000479554 MYCBP2O75592 4640 aa9.49□□□□□ -0.89
ATG4B-218ENST00000479554 A0A087WX48 190 aa9.49□□□□□ -0.89
ATG4B-218ENST00000479554 FAM229AH3BQW9 127 aa9.49□□□□□ -0.89
ATG4B-218ENST00000479554 RPL32P62910 135 aaKnown RBP9.49□□□□□ -0.89
ATG4B-218ENST00000479554 RPL39LQ96EH5 51 aaKnown RBP9.49□□□□□ -0.89
ATG4B-218ENST00000479554 SMIM2Q9BVW6 85 aa9.49□□□□□ -0.89
ATG4B-218ENST00000479554 TRBV7-3A0A075B6L6 115 aa9.48□□□□□ -0.89
ATG4B-218ENST00000479554 TRBV6-5A0A0K0K1A5 114 aa9.48□□□□□ -0.89
ATG4B-218ENST00000479554 H7C1H1 209 aa9.48□□□□□ -0.89
ATG4B-218ENST00000479554 LEPROTL1O95214 131 aa9.48□□□□□ -0.89
ATG4B-218ENST00000479554 UBE2D3P61077 147 aa9.48□□□□□ -0.89
ATG4B-218ENST00000479554 UBE2D2P62837 147 aa9.48□□□□□ -0.89
ATG4B-218ENST00000479554 PMCHL1Q16048 86 aa9.48□□□□□ -0.89
ATG4B-218ENST00000479554 CHCHD7Q9BUK0 85 aa9.48□□□□□ -0.89
ATG4B-218ENST00000479554 ST20Q9HBF5 79 aa9.48□□□□□ -0.89
ATG4B-218ENST00000479554 HSPB8Q9UJY1 196 aa9.48□□□□□ -0.89
ATG4B-218ENST00000479554 KLK12Q9UKR0 248 aa9.48□□□□□ -0.89
ATG4B-218ENST00000479554 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.47□□□□□ -0.89
ATG4B-218ENST00000479554 IGKV2D-24A0A075B6R9 120 aa9.47□□□□□ -0.89
ATG4B-218ENST00000479554 K7EMI3 77 aa9.47□□□□□ -0.89
ATG4B-218ENST00000479554 M0QY20 66 aa9.47□□□□□ -0.89
ATG4B-218ENST00000479554 HBDP02042 147 aa9.47□□□□□ -0.89
ATG4B-218ENST00000479554 KRTDAPP60985 99 aa9.47□□□□□ -0.89
ATG4B-218ENST00000479554 FAM30AQ9NZY2 134 aa9.47□□□□□ -0.89
ATG4B-218ENST00000479554 SCGB1D1O95968 90 aa9.46□□□□□ -0.9
ATG4B-218ENST00000479554 C3orf79P0CE67 100 aa9.46□□□□□ -0.9
ATG4B-218ENST00000479554 FCER1GP30273 86 aa9.46□□□□□ -0.9
ATG4B-218ENST00000479554 BAALCQ8WXS3 180 aa9.46□□□□□ -0.9
ATG4B-218ENST00000479554 UBE2WQ96B02 151 aa9.46□□□□□ -0.9
ATG4B-218ENST00000479554 DNAJC30Q96LL9 226 aa9.46□□□□□ -0.9
ATG4B-218ENST00000479554 NIT2Q9NQR4 276 aa9.46□□□□□ -0.9
ATG4B-218ENST00000479554 ORMDL2Q53FV1 153 aa9.45□□□□□ -0.9
ATG4B-218ENST00000479554 NEXN-AS1Q8NBZ9 246 aa9.45□□□□□ -0.9
ATG4B-218ENST00000479554 A0A096LNJ9 63 aa9.44□□□□□ -0.9
ATG4B-218ENST00000479554 TRBV6-8A0A0A6YYG3 113 aa9.44□□□□□ -0.9
ATG4B-218ENST00000479554 TMEM262E9PQX1 116 aa9.44□□□□□ -0.9
ATG4B-218ENST00000479554 VCYO14598 125 aa9.44□□□□□ -0.9
ATG4B-218ENST00000479554 POLR2KP53803 58 aaKnown RBP9.44□□□□□ -0.9
ATG4B-218ENST00000479554 Q8N976 141 aa9.44□□□□□ -0.9
ATG4B-218ENST00000479554 MAP1LC3CQ9BXW4 147 aa9.44□□□□□ -0.9
ATG4B-218ENST00000479554 DMBT1Q9UGM3 2413 aaPredicted RBP9.44□□□□□ -0.9
ATG4B-218ENST00000479554 SDHAF1A6NFY7 115 aa9.43□□□□□ -0.9
ATG4B-218ENST00000479554 Q6ZSA8 131 aa9.43□□□□□ -0.9
ATG4B-218ENST00000479554 TCAPO15273 167 aa9.42□□□□□ -0.9
ATG4B-218ENST00000479554 CRPP02741 224 aa9.42□□□□□ -0.9
ATG4B-218ENST00000479554 G0S2P27469 103 aa9.42□□□□□ -0.9
ATG4B-218ENST00000479554 S100A12P80511 92 aa9.42□□□□□ -0.9
ATG4B-218ENST00000479554 LINC00173Q6ZV60 143 aa9.42□□□□□ -0.9
ATG4B-218ENST00000479554 KIR2DL4Q99706 377 aa9.42□□□□□ -0.9
ATG4B-218ENST00000479554 TRBV27A0A0K0K1C4 114 aa9.41□□□□□ -0.9
ATG4B-218ENST00000479554 C20orf202A1L168 122 aa9.41□□□□□ -0.9
ATG4B-218ENST00000479554 SYS1-DBNDD2H3BUS1 97 aa9.41□□□□□ -0.9
ATG4B-218ENST00000479554 PKIAP61925 76 aa9.41□□□□□ -0.9
ATG4B-218ENST00000479554 MPV17L2Q567V2 206 aa9.41□□□□□ -0.9
ATG4B-218ENST00000479554 PET117Q6UWS5 81 aa9.41□□□□□ -0.9
ATG4B-218ENST00000479554 CHCHD5Q9BSY4 110 aa9.41□□□□□ -0.9
ATG4B-218ENST00000479554 C1orf43Q9BWL3 253 aa9.41□□□□□ -0.9
ATG4B-218ENST00000479554 LINC01549A6NIU2 74 aa9.4□□□□□ -0.9
ATG4B-218ENST00000479554 ANGP03950 147 aaKnown RBP9.4□□□□□ -0.9
ATG4B-218ENST00000479554 LINC01620Q4KN68 170 aa9.4□□□□□ -0.9
ATG4B-218ENST00000479554 TMEM97Q5BJF2 176 aa9.4□□□□□ -0.9
ATG4B-218ENST00000479554 I3L3M4 83 aa9.39□□□□□ -0.91
ATG4B-218ENST00000479554 ATP5LO75964 103 aa9.39□□□□□ -0.91
ATG4B-218ENST00000479554 ENHOQ6UWT2 76 aa9.39□□□□□ -0.91
ATG4B-218ENST00000479554 TEX43Q6ZNM6 134 aa9.39□□□□□ -0.91
ATG4B-218ENST00000479554 LINC00528Q8N1L1 170 aa9.39□□□□□ -0.91
ATG4B-218ENST00000479554 IFI27L1Q96BM0 104 aa9.39□□□□□ -0.91
ATG4B-218ENST00000479554 PLA2G1BP04054 148 aaKnown RBP9.38□□□□□ -0.91
ATG4B-218ENST00000479554 C14orf177Q52M58 125 aa9.38□□□□□ -0.91
ATG4B-218ENST00000479554 FLG2Q5D862 2391 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms