RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 BTF3L4Q96K17 158 aa6.35□□□□□ -1.39
PTPN7-208ENST00000476061 RPS10P5Q9NQ39 176 aa6.35□□□□□ -1.39
PTPN7-208ENST00000476061 AP5S1Q9NUS5 200 aa6.35□□□□□ -1.39
PTPN7-208ENST00000476061 hDV102S1A0JD36 115 aa6.34□□□□□ -1.39
PTPN7-208ENST00000476061 H7C423 109 aa6.34□□□□□ -1.39
PTPN7-208ENST00000476061 NCR2O95944 276 aa6.34□□□□□ -1.39
PTPN7-208ENST00000476061 S100PP25815 95 aa6.34□□□□□ -1.39
PTPN7-208ENST00000476061 AMTP48728 403 aa6.34□□□□□ -1.39
PTPN7-208ENST00000476061 FAM104BQ5XKR9 115 aa6.34□□□□□ -1.39
PTPN7-208ENST00000476061 RPL39LQ96EH5 51 aaKnown RBP6.34□□□□□ -1.39
PTPN7-208ENST00000476061 IGHV3-64A0A075B6Q5 118 aa6.33□□□□□ -1.4
PTPN7-208ENST00000476061 TRAV9-1A0A075B6T8 112 aa6.33□□□□□ -1.4
PTPN7-208ENST00000476061 PANO1I0J062 215 aa6.33□□□□□ -1.4
PTPN7-208ENST00000476061 GAS8-AS1O95177 125 aa6.33□□□□□ -1.4
PTPN7-208ENST00000476061 MRPL51Q4U2R6 128 aaKnown RBP6.33□□□□□ -1.4
PTPN7-208ENST00000476061 SMKR1H3BMG3 65 aa6.32□□□□□ -1.4
PTPN7-208ENST00000476061 SLPIP03973 132 aa6.32□□□□□ -1.4
PTPN7-208ENST00000476061 RPS10P46783 165 aaKnown RBP6.32□□□□□ -1.4
PTPN7-208ENST00000476061 CFAP161Q6P656 301 aa6.32□□□□□ -1.4
PTPN7-208ENST00000476061 Q6ZRU5 148 aa6.32□□□□□ -1.4
PTPN7-208ENST00000476061 TRBV6-5A0A0K0K1A5 114 aa6.31□□□□□ -1.4
PTPN7-208ENST00000476061 PPP1R17O96001 155 aa6.31□□□□□ -1.4
PTPN7-208ENST00000476061 CKS2P33552 79 aa6.31□□□□□ -1.4
PTPN7-208ENST00000476061 HNRNPA3P51991 378 aaKnown RBP6.31□□□□□ -1.4
PTPN7-208ENST00000476061 SPACA4Q8TDM5 124 aa6.31□□□□□ -1.4
PTPN7-208ENST00000476061 ST20Q9HBF5 79 aa6.31□□□□□ -1.4
PTPN7-208ENST00000476061 A0A087WYN8 130 aa6.3□□□□□ -1.4
PTPN7-208ENST00000476061 GAGE12HA6NDE8 117 aa6.3□□□□□ -1.4
PTPN7-208ENST00000476061 SDHAF1A6NFY7 115 aa6.3□□□□□ -1.4
PTPN7-208ENST00000476061 D6R8Y8 96 aa6.3□□□□□ -1.4
PTPN7-208ENST00000476061 ZNF25P17030 456 aaPredicted RBP6.3□□□□□ -1.4
PTPN7-208ENST00000476061 AMMECR1LQ6DCA0 310 aa6.3□□□□□ -1.4
PTPN7-208ENST00000476061 TMEM136Q6ZRR5 245 aa6.3□□□□□ -1.4
PTPN7-208ENST00000476061 C15orf56Q8N910 161 aa6.3□□□□□ -1.4
PTPN7-208ENST00000476061 NRACQ8N912 160 aa6.3□□□□□ -1.4
PTPN7-208ENST00000476061 I3L3M4 83 aa6.29□□□□□ -1.4
PTPN7-208ENST00000476061 APCSP02743 223 aa6.29□□□□□ -1.4
PTPN7-208ENST00000476061 PPBPP02775 128 aa6.29□□□□□ -1.4
PTPN7-208ENST00000476061 PMCHP20382 165 aa6.29□□□□□ -1.4
PTPN7-208ENST00000476061 POLR2KP53803 58 aaKnown RBP6.29□□□□□ -1.4
PTPN7-208ENST00000476061 DPH3Q96FX2 82 aa6.29□□□□□ -1.4
PTPN7-208ENST00000476061 PLAC8Q9NZF1 115 aa6.29□□□□□ -1.4
PTPN7-208ENST00000476061 TRBV24-1A0A075B6N3 115 aa6.28□□□□□ -1.4
PTPN7-208ENST00000476061 GVQW2A0A096LPI5 108 aaPredicted RBP6.28□□□□□ -1.4
PTPN7-208ENST00000476061 TNFRSF6BO95407 300 aa6.28□□□□□ -1.4
PTPN7-208ENST00000476061 NPYP01303 97 aa6.28□□□□□ -1.4
PTPN7-208ENST00000476061 FGF6P10767 208 aa6.28□□□□□ -1.4
PTPN7-208ENST00000476061 SUMO2P61956 95 aaKnown RBP6.28□□□□□ -1.4
PTPN7-208ENST00000476061 COX19Q49B96 90 aa6.28□□□□□ -1.4
PTPN7-208ENST00000476061 ORMDL3Q8N138 153 aa6.28□□□□□ -1.4
PTPN7-208ENST00000476061 OR5A1Q8NGJ0 315 aa6.28□□□□□ -1.4
PTPN7-208ENST00000476061 CHCHD10Q8WYQ3 142 aaPredicted RBP6.28□□□□□ -1.4
PTPN7-208ENST00000476061 C20orf78Q9BR46 151 aa6.28□□□□□ -1.4
PTPN7-208ENST00000476061 GNB1LQ9BYB4 327 aa6.28□□□□□ -1.4
PTPN7-208ENST00000476061 PLA2G2DQ9UNK4 145 aa6.28□□□□□ -1.4
PTPN7-208ENST00000476061 LRP1Q07954 4544 aaKnown RBP6.28□□□□□ -1.4
PTPN7-208ENST00000476061 TGIF2-C20orf24A0A0A6YYL0 155 aa6.27□□□□□ -1.41
PTPN7-208ENST00000476061 TRBV27A0A0K0K1C4 114 aa6.27□□□□□ -1.41
PTPN7-208ENST00000476061 VCYO14598 125 aa6.27□□□□□ -1.41
PTPN7-208ENST00000476061 PHOX2AO14813 284 aa6.27□□□□□ -1.41
PTPN7-208ENST00000476061 TSHBP01222 138 aa6.27□□□□□ -1.41
PTPN7-208ENST00000476061 CHTF8P0CG12 524 aa6.27□□□□□ -1.41
PTPN7-208ENST00000476061 ESDP10768 282 aa6.27□□□□□ -1.41
PTPN7-208ENST00000476061 COX6A2Q02221 97 aa6.27□□□□□ -1.41
PTPN7-208ENST00000476061 RNASEKQ6P5S7 137 aaKnown RBP6.27□□□□□ -1.41
PTPN7-208ENST00000476061 PRELID3AQ96N28 172 aa6.27□□□□□ -1.41
PTPN7-208ENST00000476061 PKIGQ9Y2B9 76 aa6.27□□□□□ -1.41
PTPN7-208ENST00000476061 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.26□□□□□ -1.41
PTPN7-208ENST00000476061 IGKV3OR2-268A0A0C4DH90 116 aa6.26□□□□□ -1.41
PTPN7-208ENST00000476061 IGKV2-29A2NJV5 120 aaPredicted RBP6.26□□□□□ -1.41
PTPN7-208ENST00000476061 MT1HL1P0DM35 61 aa6.26□□□□□ -1.41
PTPN7-208ENST00000476061 RPL32P62910 135 aaKnown RBP6.26□□□□□ -1.41
PTPN7-208ENST00000476061 FOXI1Q12951 378 aa6.26□□□□□ -1.41
PTPN7-208ENST00000476061 C7orf33Q8WU49 177 aa6.26□□□□□ -1.41
PTPN7-208ENST00000476061 TMEM101Q96IK0 257 aa6.26□□□□□ -1.41
PTPN7-208ENST00000476061 LAMTOR2Q9Y2Q5 125 aa6.26□□□□□ -1.41
PTPN7-208ENST00000476061 FAT3Q8TDW7 4589 aa6.26□□□□□ -1.41
PTPN7-208ENST00000476061 PKHD1L1Q86WI1 4243 aa6.25□□□□□ -1.41
PTPN7-208ENST00000476061 LINC00959A0A1B0GUT2 108 aa6.25□□□□□ -1.41
PTPN7-208ENST00000476061 MT-ND6P03923 174 aa6.25□□□□□ -1.41
PTPN7-208ENST00000476061 FCER1GP30273 86 aa6.25□□□□□ -1.41
PTPN7-208ENST00000476061 KIAA1644Q3SXP7 199 aa6.25□□□□□ -1.41
PTPN7-208ENST00000476061 HIGD2BQ4VC39 106 aa6.25□□□□□ -1.41
PTPN7-208ENST00000476061 MRPL52Q86TS9 123 aaKnown RBP6.25□□□□□ -1.41
PTPN7-208ENST00000476061 CBLN2Q8IUK8 224 aa6.25□□□□□ -1.41
PTPN7-208ENST00000476061 PRSS3P2Q8NHM4 247 aa6.25□□□□□ -1.41
PTPN7-208ENST00000476061 YPEL4Q96NS1 127 aa6.25□□□□□ -1.41
PTPN7-208ENST00000476061 KIR2DL4Q99706 377 aa6.25□□□□□ -1.41
PTPN7-208ENST00000476061 SMIM2Q9BVW6 85 aa6.25□□□□□ -1.41
PTPN7-208ENST00000476061 MRPL18Q9H0U6 180 aaKnown RBP6.25□□□□□ -1.41
PTPN7-208ENST00000476061 SMCO4Q9NRQ5 59 aa6.25□□□□□ -1.41
PTPN7-208ENST00000476061 IGHV1-58A0A0C4DH39 117 aa6.24□□□□□ -1.41
PTPN7-208ENST00000476061 PRSS47A8MTI9 375 aa6.24□□□□□ -1.41
PTPN7-208ENST00000476061 FABP9Q0Z7S8 132 aa6.24□□□□□ -1.41
PTPN7-208ENST00000476061 SS18Q15532 418 aa6.24□□□□□ -1.41
PTPN7-208ENST00000476061 MAP1LC3AQ9H492 121 aa6.24□□□□□ -1.41
PTPN7-208ENST00000476061 CDC42SE2Q9NRR3 84 aa6.24□□□□□ -1.41
PTPN7-208ENST00000476061 LINC00474Q9P2X8 69 aa6.24□□□□□ -1.41
PTPN7-208ENST00000476061 TRAPPC1Q9Y5R8 145 aa6.24□□□□□ -1.41
PTPN7-208ENST00000476061 HMCN2Q8NDA2 5059 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms