RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 FOXA3P55318 350 aaPredicted RBP6.72□□□□□ -1.33
CDRT1-205ENST00000475944 SRSF9Q13242 221 aaKnown RBP eCLIP6.72□□□□□ -1.33
CDRT1-205ENST00000475944 CD164L2Q6UWJ8 174 aa6.72□□□□□ -1.33
CDRT1-205ENST00000475944 OCC1Q8TAD7 63 aa6.72□□□□□ -1.33
CDRT1-205ENST00000475944 ISOC2Q96AB3 205 aa6.72□□□□□ -1.33
CDRT1-205ENST00000475944 A8MWL6 223 aa6.71□□□□□ -1.34
CDRT1-205ENST00000475944 GATCO43716 136 aaKnown RBP6.71□□□□□ -1.34
CDRT1-205ENST00000475944 TSHBP01222 138 aa6.71□□□□□ -1.34
CDRT1-205ENST00000475944 CAMPP49913 170 aa6.71□□□□□ -1.34
CDRT1-205ENST00000475944 PTTG1IPP53801 180 aa6.71□□□□□ -1.34
CDRT1-205ENST00000475944 MRPL52Q86TS9 123 aaKnown RBP6.71□□□□□ -1.34
CDRT1-205ENST00000475944 BORCS7Q96B45 105 aa6.71□□□□□ -1.34
CDRT1-205ENST00000475944 ST20Q9HBF5 79 aa6.71□□□□□ -1.34
CDRT1-205ENST00000475944 TMEM242Q9NWH2 141 aa6.71□□□□□ -1.34
CDRT1-205ENST00000475944 LOC107984640A0A0U1RRK4 108 aa6.7□□□□□ -1.34
CDRT1-205ENST00000475944 C7orf77A4D0Y5 90 aa6.7□□□□□ -1.34
CDRT1-205ENST00000475944 MALP21145 153 aa6.7□□□□□ -1.34
CDRT1-205ENST00000475944 GAGE2BQ13066 116 aa6.7□□□□□ -1.34
CDRT1-205ENST00000475944 FAM231DQ6ZW35 169 aa6.7□□□□□ -1.34
CDRT1-205ENST00000475944 ZNF664Q8N3J9 261 aa6.7□□□□□ -1.34
CDRT1-205ENST00000475944 CDC42SE2Q9NRR3 84 aa6.7□□□□□ -1.34
CDRT1-205ENST00000475944 IGLV4-69A0A075B6H9 119 aa6.69□□□□□ -1.34
CDRT1-205ENST00000475944 TMEM250H0YL14 139 aa6.69□□□□□ -1.34
CDRT1-205ENST00000475944 CT83Q5H943 113 aa6.69□□□□□ -1.34
CDRT1-205ENST00000475944 SLC51BQ86UW2 128 aa6.69□□□□□ -1.34
CDRT1-205ENST00000475944 TRBV27A0A0K0K1C4 114 aa6.68□□□□□ -1.34
CDRT1-205ENST00000475944 C1orf196B1AJZ1 125 aa6.68□□□□□ -1.34
CDRT1-205ENST00000475944 COX7A2LO14548 114 aa6.68□□□□□ -1.34
CDRT1-205ENST00000475944 POLR2KP53803 58 aaKnown RBP6.68□□□□□ -1.34
CDRT1-205ENST00000475944 SMAGPQ0VAQ4 97 aa6.68□□□□□ -1.34
CDRT1-205ENST00000475944 TMEM191AQ9H0A3 160 aa6.68□□□□□ -1.34
CDRT1-205ENST00000475944 A0A1B0GUT8 65 aa6.67□□□□□ -1.34
CDRT1-205ENST00000475944 A0A1W2PNN7 141 aa6.67□□□□□ -1.34
CDRT1-205ENST00000475944 GAS8-AS1O95177 125 aa6.67□□□□□ -1.34
CDRT1-205ENST00000475944 APOMO95445 188 aa6.67□□□□□ -1.34
CDRT1-205ENST00000475944 FCER1GP30273 86 aa6.67□□□□□ -1.34
CDRT1-205ENST00000475944 NUP35Q8NFH5 326 aa6.67□□□□□ -1.34
CDRT1-205ENST00000475944 CAMK2N2Q96S95 79 aa6.67□□□□□ -1.34
CDRT1-205ENST00000475944 CSDC2Q9Y534 153 aaKnown RBP6.67□□□□□ -1.34
CDRT1-205ENST00000475944 HIGD1CA8MV81 97 aa6.66□□□□□ -1.34
CDRT1-205ENST00000475944 MT-ND6P03923 174 aa6.66□□□□□ -1.34
CDRT1-205ENST00000475944 RAB4AP20338 218 aa6.66□□□□□ -1.34
CDRT1-205ENST00000475944 C9orf116Q5BN46 136 aaPredicted RBP6.66□□□□□ -1.34
CDRT1-205ENST00000475944 C2orf48Q96LS8 159 aa6.66□□□□□ -1.34
CDRT1-205ENST00000475944 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.65□□□□□ -1.34
CDRT1-205ENST00000475944 VCYO14598 125 aa6.65□□□□□ -1.34
CDRT1-205ENST00000475944 PPP1R17O96001 155 aa6.65□□□□□ -1.34
CDRT1-205ENST00000475944 CEBPGP53567 150 aa6.65□□□□□ -1.34
CDRT1-205ENST00000475944 RPL18AQ02543 176 aaKnown RBP6.65□□□□□ -1.34
CDRT1-205ENST00000475944 AMN1Q8IY45 258 aa6.65□□□□□ -1.34
CDRT1-205ENST00000475944 TCTE3Q8IZS6 198 aa6.65□□□□□ -1.34
CDRT1-205ENST00000475944 TSKUQ8WUA8 353 aa6.65□□□□□ -1.34
CDRT1-205ENST00000475944 KIR2DL4Q99706 377 aa6.65□□□□□ -1.34
CDRT1-205ENST00000475944 PSORS1C2Q9UIG4 136 aa6.65□□□□□ -1.34
CDRT1-205ENST00000475944 RNF213Q63HN8 5207 aa6.64□□□□□ -1.35
CDRT1-205ENST00000475944 TRAV13-1A0A0B4J241 112 aa6.64□□□□□ -1.35
CDRT1-205ENST00000475944 BLOC1S1P78537 153 aa6.64□□□□□ -1.35
CDRT1-205ENST00000475944 C1orf137Q5JT78 98 aa6.64□□□□□ -1.35
CDRT1-205ENST00000475944 TMEM18Q96B42 140 aa6.64□□□□□ -1.35
CDRT1-205ENST00000475944 UBE2D4Q9Y2X8 147 aa6.64□□□□□ -1.35
CDRT1-205ENST00000475944 SUMO2P61956 95 aaKnown RBP6.63□□□□□ -1.35
CDRT1-205ENST00000475944 SPAG11BQ08648 103 aa6.63□□□□□ -1.35
CDRT1-205ENST00000475944 RNF151Q2KHN1 245 aa6.63□□□□□ -1.35
CDRT1-205ENST00000475944 RNASE13Q5GAN3 156 aaKnown RBP6.63□□□□□ -1.35
CDRT1-205ENST00000475944 C5orf38Q86SI9 138 aa6.63□□□□□ -1.35
CDRT1-205ENST00000475944 SMIM7Q9BQ49 75 aa6.63□□□□□ -1.35
CDRT1-205ENST00000475944 SMKR1H3BMG3 65 aa6.62□□□□□ -1.35
CDRT1-205ENST00000475944 PPP1R2P9O14990 202 aa6.62□□□□□ -1.35
CDRT1-205ENST00000475944 RIGQ13278 110 aa6.62□□□□□ -1.35
CDRT1-205ENST00000475944 Q6ZUT4 128 aa6.62□□□□□ -1.35
CDRT1-205ENST00000475944 PHF5AQ7RTV0 110 aaKnown RBP6.62□□□□□ -1.35
CDRT1-205ENST00000475944 LINC01551Q86U37 167 aa6.62□□□□□ -1.35
CDRT1-205ENST00000475944 OR10D4PQ8NGN7 298 aa6.62□□□□□ -1.35
CDRT1-205ENST00000475944 OPRPNQ99935 248 aaPredicted RBP6.62□□□□□ -1.35
CDRT1-205ENST00000475944 TIMM21Q9BVV7 248 aa6.62□□□□□ -1.35
CDRT1-205ENST00000475944 OSTCQ9NRP0 149 aa6.62□□□□□ -1.35
CDRT1-205ENST00000475944 F8WDY8 70 aa6.61□□□□□ -1.35
CDRT1-205ENST00000475944 ALKAL2Q6UX46 152 aa6.61□□□□□ -1.35
CDRT1-205ENST00000475944 NRACQ8N912 160 aa6.61□□□□□ -1.35
CDRT1-205ENST00000475944 DIRC1Q969H9 104 aa6.61□□□□□ -1.35
CDRT1-205ENST00000475944 IMMP2LQ96T52 175 aa6.61□□□□□ -1.35
CDRT1-205ENST00000475944 ZNF727A8MUV8 499 aa6.6□□□□□ -1.35
CDRT1-205ENST00000475944 IGLV7-43P04211 117 aa6.6□□□□□ -1.35
CDRT1-205ENST00000475944 EIF5A2Q9GZV4 153 aaKnown RBP6.6□□□□□ -1.35
CDRT1-205ENST00000475944 MRPL35Q9NZE8 188 aaKnown RBP6.6□□□□□ -1.35
CDRT1-205ENST00000475944 A0A087WZ39 114 aa6.59□□□□□ -1.35
CDRT1-205ENST00000475944 TCAPO15273 167 aa6.59□□□□□ -1.35
CDRT1-205ENST00000475944 PRR26Q8N8Z3 221 aa6.59□□□□□ -1.35
CDRT1-205ENST00000475944 ORAOV1Q8WV07 137 aa6.59□□□□□ -1.35
CDRT1-205ENST00000475944 V9GYV3 84 aa6.59□□□□□ -1.35
CDRT1-205ENST00000475944 LINC00862A6NCI5 91 aa6.58□□□□□ -1.36
CDRT1-205ENST00000475944 H0Y9J4 135 aa6.58□□□□□ -1.36
CDRT1-205ENST00000475944 NDUFA1O15239 70 aa6.58□□□□□ -1.36
CDRT1-205ENST00000475944 FAM104BQ5XKR9 115 aa6.58□□□□□ -1.36
CDRT1-205ENST00000475944 C20orf78Q9BR46 151 aa6.58□□□□□ -1.36
CDRT1-205ENST00000475944 NAT8BQ9UHF3 227 aa6.58□□□□□ -1.36
CDRT1-205ENST00000475944 IGLV1-50A0A075B6I6 118 aa6.57□□□□□ -1.36
CDRT1-205ENST00000475944 IGHV3OR16-9A0A0B4J2B5 98 aa6.57□□□□□ -1.36
CDRT1-205ENST00000475944 TLX1NBP0CAT3 122 aa6.57□□□□□ -1.36
CDRT1-205ENST00000475944 RPL32P62910 135 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms