RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 I3L3M4 83 aa15.48■□□□□ 0.07
TMEM54-205ENST00000475208 KRTAP10-8P60410 259 aa15.48■□□□□ 0.07
TMEM54-205ENST00000475208 A0A1B0GVG6 124 aa15.47■□□□□ 0.07
TMEM54-205ENST00000475208 ESDP10768 282 aa15.46■□□□□ 0.07
TMEM54-205ENST00000475208 TRBV6-5A0A0K0K1A5 114 aa15.45■□□□□ 0.06
TMEM54-205ENST00000475208 Q6ZRP5 223 aa15.45■□□□□ 0.06
TMEM54-205ENST00000475208 TMEM242Q9NWH2 141 aa15.45■□□□□ 0.06
TMEM54-205ENST00000475208 TSHBP01222 138 aa15.44■□□□□ 0.06
TMEM54-205ENST00000475208 SYCNQ0VAF6 134 aa15.44■□□□□ 0.06
TMEM54-205ENST00000475208 SS18Q15532 418 aa15.44■□□□□ 0.06
TMEM54-205ENST00000475208 MRAP2Q96G30 205 aa15.44■□□□□ 0.06
TMEM54-205ENST00000475208 ZNF561-AS1K7EIQ3 104 aa15.43■□□□□ 0.06
TMEM54-205ENST00000475208 GATCO43716 136 aaKnown RBP15.43■□□□□ 0.06
TMEM54-205ENST00000475208 GAS8-AS1O95177 125 aa15.43■□□□□ 0.06
TMEM54-205ENST00000475208 SRSF9Q13242 221 aaKnown RBP eCLIP15.43■□□□□ 0.06
TMEM54-205ENST00000475208 CD164L2Q6UWJ8 174 aa15.42■□□□□ 0.06
TMEM54-205ENST00000475208 ST20Q9HBF5 79 aa15.42■□□□□ 0.06
TMEM54-205ENST00000475208 CDC42SE2Q9NRR3 84 aa15.41■□□□□ 0.06
TMEM54-205ENST00000475208 A8MWL6 223 aa15.4■□□□□ 0.06
TMEM54-205ENST00000475208 CAMPP49913 170 aa15.4■□□□□ 0.06
TMEM54-205ENST00000475208 PTTG1IPP53801 180 aa15.4■□□□□ 0.06
TMEM54-205ENST00000475208 FAM231DQ6ZW35 169 aa15.4■□□□□ 0.06
TMEM54-205ENST00000475208 MRPL52Q86TS9 123 aaKnown RBP15.4■□□□□ 0.06
TMEM54-205ENST00000475208 EIF5A2Q9GZV4 153 aaKnown RBP15.39■□□□□ 0.05
TMEM54-205ENST00000475208 CEBPGP53567 150 aa15.38■□□□□ 0.05
TMEM54-205ENST00000475208 GAGE2BQ13066 116 aa15.38■□□□□ 0.05
TMEM54-205ENST00000475208 ZNF664Q8N3J9 261 aa15.38■□□□□ 0.05
TMEM54-205ENST00000475208 FAM210AQ96ND0 272 aa15.38■□□□□ 0.05
TMEM54-205ENST00000475208 LOC107984640A0A0U1RRK4 108 aa15.37■□□□□ 0.05
TMEM54-205ENST00000475208 C7orf77A4D0Y5 90 aa15.37■□□□□ 0.05
TMEM54-205ENST00000475208 ISOC2Q96AB3 205 aa15.37■□□□□ 0.05
TMEM54-205ENST00000475208 BORCS7Q96B45 105 aa15.37■□□□□ 0.05
TMEM54-205ENST00000475208 IGLV4-69A0A075B6H9 119 aa15.36■□□□□ 0.05
TMEM54-205ENST00000475208 POLR2KP53803 58 aaKnown RBP15.36■□□□□ 0.05
TMEM54-205ENST00000475208 CT83Q5H943 113 aa15.36■□□□□ 0.05
TMEM54-205ENST00000475208 TRBV27A0A0K0K1C4 114 aa15.35■□□□□ 0.05
TMEM54-205ENST00000475208 SMIM7Q9BQ49 75 aa15.35■□□□□ 0.05
TMEM54-205ENST00000475208 SRP19P09132 144 aaKnown RBP15.34■□□□□ 0.05
TMEM54-205ENST00000475208 MALP21145 153 aa15.34■□□□□ 0.05
TMEM54-205ENST00000475208 LINC01551Q86U37 167 aa15.34■□□□□ 0.05
TMEM54-205ENST00000475208 A0A1W2PNN7 141 aa15.33■□□□□ 0.04
TMEM54-205ENST00000475208 COX7A2LO14548 114 aa15.33■□□□□ 0.04
TMEM54-205ENST00000475208 TMEM191AQ9H0A3 160 aa15.33■□□□□ 0.04
TMEM54-205ENST00000475208 A0A1B0GUT8 65 aa15.32■□□□□ 0.04
TMEM54-205ENST00000475208 NUP35Q8NFH5 326 aa15.32■□□□□ 0.04
TMEM54-205ENST00000475208 ZNF727A8MUV8 499 aa15.31■□□□□ 0.04
TMEM54-205ENST00000475208 HIGD1CA8MV81 97 aa15.31■□□□□ 0.04
TMEM54-205ENST00000475208 C1orf196B1AJZ1 125 aa15.31■□□□□ 0.04
TMEM54-205ENST00000475208 RAB4AP20338 218 aa15.31■□□□□ 0.04
TMEM54-205ENST00000475208 AMN1Q8IY45 258 aa15.31■□□□□ 0.04
TMEM54-205ENST00000475208 CAMK2N2Q96S95 79 aa15.31■□□□□ 0.04
TMEM54-205ENST00000475208 APOMO95445 188 aa15.3■□□□□ 0.04
TMEM54-205ENST00000475208 FCER1GP30273 86 aa15.29■□□□□ 0.04
TMEM54-205ENST00000475208 RNASE13Q5GAN3 156 aaKnown RBP15.29■□□□□ 0.04
TMEM54-205ENST00000475208 TSKUQ8WUA8 353 aa15.29■□□□□ 0.04
TMEM54-205ENST00000475208 PSORS1C2Q9UIG4 136 aa15.29■□□□□ 0.04
TMEM54-205ENST00000475208 SMKR1H3BMG3 65 aa15.28■□□□□ 0.04
TMEM54-205ENST00000475208 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.28■□□□□ 0.04
TMEM54-205ENST00000475208 MT-ND6P03923 174 aa15.28■□□□□ 0.04
TMEM54-205ENST00000475208 C9orf116Q5BN46 136 aaPredicted RBP15.28■□□□□ 0.04
TMEM54-205ENST00000475208 OSTCQ9NRP0 149 aa15.28■□□□□ 0.04
TMEM54-205ENST00000475208 TRAV13-1A0A0B4J241 112 aa15.27■□□□□ 0.04
TMEM54-205ENST00000475208 VCYO14598 125 aa15.27■□□□□ 0.04
TMEM54-205ENST00000475208 RPL18AQ02543 176 aaKnown RBP15.27■□□□□ 0.04
TMEM54-205ENST00000475208 UBE2D4Q9Y2X8 147 aa15.27■□□□□ 0.04
TMEM54-205ENST00000475208 CSDC2Q9Y534 153 aaKnown RBP15.27■□□□□ 0.04
TMEM54-205ENST00000475208 C2orf48Q96LS8 159 aa15.26■□□□□ 0.03
TMEM54-205ENST00000475208 SMAGPQ0VAQ4 97 aa15.25■□□□□ 0.03
TMEM54-205ENST00000475208 C5orf38Q86SI9 138 aa15.25■□□□□ 0.03
TMEM54-205ENST00000475208 C9JQL5 133 aa15.24■□□□□ 0.03
TMEM54-205ENST00000475208 Q6ZUT4 128 aa15.24■□□□□ 0.03
TMEM54-205ENST00000475208 SUMO2P61956 95 aaKnown RBP15.23■□□□□ 0.03
TMEM54-205ENST00000475208 SPAG11BQ08648 103 aa15.23■□□□□ 0.03
TMEM54-205ENST00000475208 TMEM241Q24JQ0 296 aa15.23■□□□□ 0.03
TMEM54-205ENST00000475208 FAM74A3Q4VXF1 159 aa15.23■□□□□ 0.03
TMEM54-205ENST00000475208 C1orf137Q5JT78 98 aa15.23■□□□□ 0.03
TMEM54-205ENST00000475208 PHF5AQ7RTV0 110 aaKnown RBP15.23■□□□□ 0.03
TMEM54-205ENST00000475208 NRACQ8N912 160 aa15.23■□□□□ 0.03
TMEM54-205ENST00000475208 OPRPNQ99935 248 aaPredicted RBP15.23■□□□□ 0.03
TMEM54-205ENST00000475208 V9GYV3 84 aa15.23■□□□□ 0.03
TMEM54-205ENST00000475208 PPP1R17O96001 155 aa15.22■□□□□ 0.03
TMEM54-205ENST00000475208 KIR2DL4Q99706 377 aa15.22■□□□□ 0.03
TMEM54-205ENST00000475208 LPAP08519 4548 aa15.21■□□□□ 0.03
TMEM54-205ENST00000475208 RPL23P62829 140 aaKnown RBP15.2■□□□□ 0.02
TMEM54-205ENST00000475208 SRSF3P84103 164 aaKnown RBP15.2■□□□□ 0.02
TMEM54-205ENST00000475208 RIGQ13278 110 aa15.2■□□□□ 0.02
TMEM54-205ENST00000475208 RNF151Q2KHN1 245 aa15.18■□□□□ 0.02
TMEM54-205ENST00000475208 TIMM21Q9BVV7 248 aa15.18■□□□□ 0.02
TMEM54-205ENST00000475208 PPP1R2P9O14990 202 aa15.17■□□□□ 0.02
TMEM54-205ENST00000475208 PEA15Q15121 130 aa15.17■□□□□ 0.02
TMEM54-205ENST00000475208 OR10D4PQ8NGN7 298 aa15.17■□□□□ 0.02
TMEM54-205ENST00000475208 TMEM18Q96B42 140 aa15.17■□□□□ 0.02
TMEM54-205ENST00000475208 NAT8Q9UHE5 227 aa15.17■□□□□ 0.02
TMEM54-205ENST00000475208 SMDT1Q9H4I9 107 aa15.16■□□□□ 0.02
TMEM54-205ENST00000475208 ADIRFQ15847 76 aa15.15■□□□□ 0.02
TMEM54-205ENST00000475208 PRR26Q8N8Z3 221 aa15.15■□□□□ 0.02
TMEM54-205ENST00000475208 ORAOV1Q8WV07 137 aa15.15■□□□□ 0.02
TMEM54-205ENST00000475208 DIRC1Q969H9 104 aa15.15■□□□□ 0.02
TMEM54-205ENST00000475208 MRPL35Q9NZE8 188 aaKnown RBP15.15■□□□□ 0.02
TMEM54-205ENST00000475208 IGLV7-43P04211 117 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms