RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 PPP1R17O96001 155 aa6.96□□□□□ -1.3
COL4A3-204ENST00000469504 HNRNPA3P51991 378 aaKnown RBP6.96□□□□□ -1.3
COL4A3-204ENST00000469504 SMAGPQ0VAQ4 97 aa6.96□□□□□ -1.3
COL4A3-204ENST00000469504 TSKUQ8WUA8 353 aa6.96□□□□□ -1.3
COL4A3-204ENST00000469504 TMEM191AQ9H0A3 160 aa6.96□□□□□ -1.3
COL4A3-204ENST00000469504 ST20Q9HBF5 79 aa6.96□□□□□ -1.3
COL4A3-204ENST00000469504 CCL25O15444 150 aa6.95□□□□□ -1.3
COL4A3-204ENST00000469504 ESDP10768 282 aa6.95□□□□□ -1.3
COL4A3-204ENST00000469504 COX6A2Q02221 97 aa6.95□□□□□ -1.3
COL4A3-204ENST00000469504 FOXI1Q12951 378 aa6.95□□□□□ -1.3
COL4A3-204ENST00000469504 MRPL52Q86TS9 123 aaKnown RBP6.95□□□□□ -1.3
COL4A3-204ENST00000469504 HMCN2Q8NDA2 5059 aa6.94□□□□□ -1.3
COL4A3-204ENST00000469504 IGHV1-58A0A0C4DH39 117 aa6.94□□□□□ -1.3
COL4A3-204ENST00000469504 TRBV27A0A0K0K1C4 114 aa6.94□□□□□ -1.3
COL4A3-204ENST00000469504 HIGD1CA8MV81 97 aa6.94□□□□□ -1.3
COL4A3-204ENST00000469504 CHTF8P0CG12 524 aa6.94□□□□□ -1.3
COL4A3-204ENST00000469504 POLR2KP53803 58 aaKnown RBP6.94□□□□□ -1.3
COL4A3-204ENST00000469504 SS18Q15532 418 aa6.94□□□□□ -1.3
COL4A3-204ENST00000469504 ALKAL2Q6UX46 152 aa6.94□□□□□ -1.3
COL4A3-204ENST00000469504 LINC01551Q86U37 167 aa6.94□□□□□ -1.3
COL4A3-204ENST00000469504 SMIM7Q9BQ49 75 aa6.94□□□□□ -1.3
COL4A3-204ENST00000469504 EIF5A2Q9GZV4 153 aaKnown RBP6.94□□□□□ -1.3
COL4A3-204ENST00000469504 OSTCQ9NRP0 149 aa6.94□□□□□ -1.3
COL4A3-204ENST00000469504 PKHD1L1Q86WI1 4243 aa6.94□□□□□ -1.3
COL4A3-204ENST00000469504 LINC00959A0A1B0GUT2 108 aa6.93□□□□□ -1.3
COL4A3-204ENST00000469504 C7orf77A4D0Y5 90 aa6.93□□□□□ -1.3
COL4A3-204ENST00000469504 CEBPGP53567 150 aa6.93□□□□□ -1.3
COL4A3-204ENST00000469504 HIGD2BQ4VC39 106 aa6.93□□□□□ -1.3
COL4A3-204ENST00000469504 CD164L2Q6UWJ8 174 aa6.93□□□□□ -1.3
COL4A3-204ENST00000469504 CDC42SE2Q9NRR3 84 aa6.93□□□□□ -1.3
COL4A3-204ENST00000469504 CSDC2Q9Y534 153 aaKnown RBP6.93□□□□□ -1.3
COL4A3-204ENST00000469504 ZNF727A8MUV8 499 aa6.92□□□□□ -1.3
COL4A3-204ENST00000469504 VCYO14598 125 aa6.92□□□□□ -1.3
COL4A3-204ENST00000469504 PHOX2AO14813 284 aa6.92□□□□□ -1.3
COL4A3-204ENST00000469504 PPP1R2P9O14990 202 aa6.92□□□□□ -1.3
COL4A3-204ENST00000469504 TSHBP01222 138 aa6.92□□□□□ -1.3
COL4A3-204ENST00000469504 RAB4AP20338 218 aa6.92□□□□□ -1.3
COL4A3-204ENST00000469504 XCL1P47992 114 aa6.92□□□□□ -1.3
COL4A3-204ENST00000469504 RIGQ13278 110 aa6.92□□□□□ -1.3
COL4A3-204ENST00000469504 MAJINQ3KP22 176 aa6.92□□□□□ -1.3
COL4A3-204ENST00000469504 FAM74A3Q4VXF1 159 aa6.92□□□□□ -1.3
COL4A3-204ENST00000469504 LCE3BQ5TA77 95 aa6.92□□□□□ -1.3
COL4A3-204ENST00000469504 PRSS3P2Q8NHM4 247 aa6.92□□□□□ -1.3
COL4A3-204ENST00000469504 ISOC2Q96AB3 205 aa6.92□□□□□ -1.3
COL4A3-204ENST00000469504 ZNF561-AS1K7EIQ3 104 aa6.91□□□□□ -1.3
COL4A3-204ENST00000469504 TCAPO15273 167 aa6.91□□□□□ -1.3
COL4A3-204ENST00000469504 MT1HL1P0DM35 61 aa6.91□□□□□ -1.3
COL4A3-204ENST00000469504 ZNF664Q8N3J9 261 aa6.91□□□□□ -1.3
COL4A3-204ENST00000469504 STPG4Q8N801 248 aa6.91□□□□□ -1.3
COL4A3-204ENST00000469504 TMEM18Q96B42 140 aa6.91□□□□□ -1.3
COL4A3-204ENST00000469504 CARD19Q96LW7 228 aa6.91□□□□□ -1.3
COL4A3-204ENST00000469504 KIR2DL4Q99706 377 aa6.91□□□□□ -1.3
COL4A3-204ENST00000469504 TMEM242Q9NWH2 141 aa6.91□□□□□ -1.3
COL4A3-204ENST00000469504 IGKV2-24A0A0C4DH68 120 aa6.9□□□□□ -1.3
COL4A3-204ENST00000469504 C1orf196B1AJZ1 125 aa6.9□□□□□ -1.3
COL4A3-204ENST00000469504 FCER1GP30273 86 aa6.9□□□□□ -1.3
COL4A3-204ENST00000469504 PRR3P79522 188 aaKnown RBP6.9□□□□□ -1.3
COL4A3-204ENST00000469504 AMN1Q8IY45 258 aa6.9□□□□□ -1.3
COL4A3-204ENST00000469504 NAT8BQ9UHF3 227 aa6.9□□□□□ -1.3
COL4A3-204ENST00000469504 A0A096LNI7 61 aa6.89□□□□□ -1.31
COL4A3-204ENST00000469504 A0A1B0GW15 77 aa6.89□□□□□ -1.31
COL4A3-204ENST00000469504 LINC00862A6NCI5 91 aa6.89□□□□□ -1.31
COL4A3-204ENST00000469504 SRP19P09132 144 aaKnown RBP6.89□□□□□ -1.31
COL4A3-204ENST00000469504 SUMO2P61956 95 aaKnown RBP6.89□□□□□ -1.31
COL4A3-204ENST00000469504 SYCNQ0VAF6 134 aa6.89□□□□□ -1.31
COL4A3-204ENST00000469504 V9GYV3 84 aa6.89□□□□□ -1.31
COL4A3-204ENST00000469504 GAS8-AS1O95177 125 aa6.88□□□□□ -1.31
COL4A3-204ENST00000469504 MALP21145 153 aa6.88□□□□□ -1.31
COL4A3-204ENST00000469504 CAMPP49913 170 aa6.88□□□□□ -1.31
COL4A3-204ENST00000469504 RPL32P62910 135 aaKnown RBP6.88□□□□□ -1.31
COL4A3-204ENST00000469504 TMEM241Q24JQ0 296 aa6.88□□□□□ -1.31
COL4A3-204ENST00000469504 NUP35Q8NFH5 326 aa6.88□□□□□ -1.31
COL4A3-204ENST00000469504 KRTAP4-12Q9BQ66 201 aa6.88□□□□□ -1.31
COL4A3-204ENST00000469504 C20orf78Q9BR46 151 aa6.88□□□□□ -1.31
COL4A3-204ENST00000469504 TIMM21Q9BVV7 248 aa6.88□□□□□ -1.31
COL4A3-204ENST00000469504 SMDT1Q9H4I9 107 aa6.88□□□□□ -1.31
COL4A3-204ENST00000469504 IGLV4-69A0A075B6H9 119 aa6.87□□□□□ -1.31
COL4A3-204ENST00000469504 TRBV24-1A0A075B6N3 115 aa6.87□□□□□ -1.31
COL4A3-204ENST00000469504 COX7A2LO14548 114 aa6.87□□□□□ -1.31
COL4A3-204ENST00000469504 APOMO95445 188 aa6.87□□□□□ -1.31
COL4A3-204ENST00000469504 SPINK6Q6UWN8 80 aa6.87□□□□□ -1.31
COL4A3-204ENST00000469504 Q6ZRP5 223 aa6.87□□□□□ -1.31
COL4A3-204ENST00000469504 NRACQ8N912 160 aa6.87□□□□□ -1.31
COL4A3-204ENST00000469504 C2orf48Q96LS8 159 aa6.87□□□□□ -1.31
COL4A3-204ENST00000469504 LINC01600Q96MT4 127 aa6.87□□□□□ -1.31
COL4A3-204ENST00000469504 UBE2D4Q9Y2X8 147 aa6.87□□□□□ -1.31
COL4A3-204ENST00000469504 LOC107984640A0A0U1RRK4 108 aa6.86□□□□□ -1.31
COL4A3-204ENST00000469504 S100A8P05109 93 aa6.86□□□□□ -1.31
COL4A3-204ENST00000469504 FAM104BQ5XKR9 115 aa6.86□□□□□ -1.31
COL4A3-204ENST00000469504 REG3GQ6UW15 175 aa6.86□□□□□ -1.31
COL4A3-204ENST00000469504 NAT8Q9UHE5 227 aa6.86□□□□□ -1.31
COL4A3-204ENST00000469504 SMIM27A0A1W2PRY6 76 aa6.85□□□□□ -1.31
COL4A3-204ENST00000469504 F8WDY8 70 aa6.85□□□□□ -1.31
COL4A3-204ENST00000469504 PTTG1IPP53801 180 aa6.85□□□□□ -1.31
COL4A3-204ENST00000469504 RPL23P62829 140 aaKnown RBP6.85□□□□□ -1.31
COL4A3-204ENST00000469504 F8W036 122 aa6.84□□□□□ -1.31
COL4A3-204ENST00000469504 PEA15Q15121 130 aa6.84□□□□□ -1.31
COL4A3-204ENST00000469504 ADIRFQ15847 76 aa6.84□□□□□ -1.31
COL4A3-204ENST00000469504 RNF151Q2KHN1 245 aa6.84□□□□□ -1.31
COL4A3-204ENST00000469504 MRPL51Q4U2R6 128 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms