RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 BTF3L4Q96K17 158 aa11.2□□□□□ -0.62
LINC00888-201ENST00000468380 CNFNQ9BYD5 112 aa11.2□□□□□ -0.62
LINC00888-201ENST00000468380 CDC42SE2Q9NRR3 84 aa11.2□□□□□ -0.62
LINC00888-201ENST00000468380 OPRPNQ99935 248 aaPredicted RBP11.19□□□□□ -0.62
LINC00888-201ENST00000468380 H2AFB1P0C5Y9 115 aa11.18□□□□□ -0.62
LINC00888-201ENST00000468380 RPL18AQ02543 176 aaKnown RBP11.18□□□□□ -0.62
LINC00888-201ENST00000468380 CAMK2N2Q96S95 79 aa11.18□□□□□ -0.62
LINC00888-201ENST00000468380 A0A087WZ39 114 aa11.17□□□□□ -0.62
LINC00888-201ENST00000468380 UMAD1C9J7I0 102 aa11.17□□□□□ -0.62
LINC00888-201ENST00000468380 I3L3M4 83 aa11.17□□□□□ -0.62
LINC00888-201ENST00000468380 TRBV20OR9-2A0A075B6H5 130 aa11.16□□□□□ -0.62
LINC00888-201ENST00000468380 TSHBP01222 138 aa11.16□□□□□ -0.62
LINC00888-201ENST00000468380 PMCHP20382 165 aa11.16□□□□□ -0.62
LINC00888-201ENST00000468380 EIF5AP63241 154 aaKnown RBP11.16□□□□□ -0.62
LINC00888-201ENST00000468380 EIF5AL1Q6IS14 154 aaKnown RBP11.16□□□□□ -0.62
LINC00888-201ENST00000468380 NUDT10Q8NFP7 164 aa11.16□□□□□ -0.62
LINC00888-201ENST00000468380 NUDT11Q96G61 164 aa11.16□□□□□ -0.62
LINC00888-201ENST00000468380 FAM168BA1KXE4 195 aa11.15□□□□□ -0.62
LINC00888-201ENST00000468380 BCL2L11O43521 198 aa11.15□□□□□ -0.62
LINC00888-201ENST00000468380 GNG4P50150 75 aa11.15□□□□□ -0.62
LINC00888-201ENST00000468380 GNG13Q9P2W3 67 aa11.15□□□□□ -0.62
LINC00888-201ENST00000468380 COX7A2LO14548 114 aa11.14□□□□□ -0.63
LINC00888-201ENST00000468380 MALP21145 153 aa11.14□□□□□ -0.63
LINC00888-201ENST00000468380 MRPL52Q86TS9 123 aaKnown RBP11.14□□□□□ -0.63
LINC00888-201ENST00000468380 SMIM12Q96EX1 92 aa11.14□□□□□ -0.63
LINC00888-201ENST00000468380 C2orf48Q96LS8 159 aa11.14□□□□□ -0.63
LINC00888-201ENST00000468380 TMEM242Q9NWH2 141 aa11.14□□□□□ -0.63
LINC00888-201ENST00000468380 TRBV6-5A0A0K0K1A5 114 aa11.12□□□□□ -0.63
LINC00888-201ENST00000468380 MRAP2Q96G30 205 aa11.12□□□□□ -0.63
LINC00888-201ENST00000468380 RNASE7Q9H1E1 156 aaKnown RBP11.12□□□□□ -0.63
LINC00888-201ENST00000468380 MANBALQ9NQG1 85 aa11.12□□□□□ -0.63
LINC00888-201ENST00000468380 C1orf196B1AJZ1 125 aa11.11□□□□□ -0.63
LINC00888-201ENST00000468380 SMLR1H3BR10 107 aa11.11□□□□□ -0.63
LINC00888-201ENST00000468380 RNF151Q2KHN1 245 aa11.11□□□□□ -0.63
LINC00888-201ENST00000468380 TEX261Q6UWH6 196 aa11.11□□□□□ -0.63
LINC00888-201ENST00000468380 C5orf38Q86SI9 138 aa11.11□□□□□ -0.63
LINC00888-201ENST00000468380 KRTAP7-1Q8IUC3 87 aa11.11□□□□□ -0.63
LINC00888-201ENST00000468380 TRAV1-1A0A0B4J248 108 aa11.1□□□□□ -0.63
LINC00888-201ENST00000468380 UBE2D1P51668 147 aa11.1□□□□□ -0.63
LINC00888-201ENST00000468380 TSPAN13O95857 204 aa11.09□□□□□ -0.63
LINC00888-201ENST00000468380 RNASE13Q5GAN3 156 aaKnown RBP11.09□□□□□ -0.63
LINC00888-201ENST00000468380 RPP21Q9H633 154 aaKnown RBP11.09□□□□□ -0.63
LINC00888-201ENST00000468380 RPL13AP40429 203 aaKnown RBP11.08□□□□□ -0.64
LINC00888-201ENST00000468380 POLR2KP53803 58 aaKnown RBP11.08□□□□□ -0.64
LINC00888-201ENST00000468380 ST20Q9HBF5 79 aa11.08□□□□□ -0.64
LINC00888-201ENST00000468380 BIN3Q9NQY0 253 aa11.08□□□□□ -0.64
LINC00888-201ENST00000468380 MED9Q9NWA0 146 aa11.08□□□□□ -0.64
LINC00888-201ENST00000468380 TRAV13-1A0A0B4J241 112 aa11.07□□□□□ -0.64
LINC00888-201ENST00000468380 SPAG11BQ08648 103 aa11.07□□□□□ -0.64
LINC00888-201ENST00000468380 SMIM15Q7Z3B0 74 aa11.07□□□□□ -0.64
LINC00888-201ENST00000468380 C7orf77A4D0Y5 90 aa11.06□□□□□ -0.64
LINC00888-201ENST00000468380 K7EN84 100 aa11.06□□□□□ -0.64
LINC00888-201ENST00000468380 ZNF345Q14585 488 aa11.06□□□□□ -0.64
LINC00888-201ENST00000468380 C10orf25Q5T742 122 aa11.06□□□□□ -0.64
LINC00888-201ENST00000468380 FAM19A5Q7Z5A7 132 aaPredicted RBP11.06□□□□□ -0.64
LINC00888-201ENST00000468380 TSKUQ8WUA8 353 aa11.06□□□□□ -0.64
LINC00888-201ENST00000468380 MRPL35Q9NZE8 188 aaKnown RBP11.05□□□□□ -0.64
LINC00888-201ENST00000468380 CARHSP1Q9Y2V2 147 aaKnown RBP11.05□□□□□ -0.64
LINC00888-201ENST00000468380 TRBV27A0A0K0K1C4 114 aa11.04□□□□□ -0.64
LINC00888-201ENST00000468380 OCC1Q8TAD7 63 aa11.04□□□□□ -0.64
LINC00888-201ENST00000468380 FAM210AQ96ND0 272 aa11.04□□□□□ -0.64
LINC00888-201ENST00000468380 UBE2D4Q9Y2X8 147 aa11.04□□□□□ -0.64
LINC00888-201ENST00000468380 CSDC2Q9Y534 153 aaKnown RBP11.04□□□□□ -0.64
LINC00888-201ENST00000468380 MUC17Q685J3 4493 aa11.03□□□□□ -0.64
LINC00888-201ENST00000468380 PDE6DO43924 150 aa11.03□□□□□ -0.64
LINC00888-201ENST00000468380 IMMP2LQ96T52 175 aa11.03□□□□□ -0.64
LINC00888-201ENST00000468380 TLX1NBP0CAT3 122 aa11.02□□□□□ -0.65
LINC00888-201ENST00000468380 GAGE2EQ4V326 116 aa11.02□□□□□ -0.65
LINC00888-201ENST00000468380 UNQ6190/PRO20217Q6UXQ8 127 aa11.02□□□□□ -0.65
LINC00888-201ENST00000468380 GAGE2DQ9UEU5 116 aa11.02□□□□□ -0.65
LINC00888-201ENST00000468380 OR10D4PQ8NGN7 298 aa11.01□□□□□ -0.65
LINC00888-201ENST00000468380 C6orf48Q9UBA6 75 aa11.01□□□□□ -0.65
LINC00888-201ENST00000468380 Q6ZUT4 128 aa11□□□□□ -0.65
LINC00888-201ENST00000468380 ORAOV1Q8WV07 137 aa11□□□□□ -0.65
LINC00888-201ENST00000468380 KANTRA0A1W2PQU2 76 aa10.99□□□□□ -0.65
LINC00888-201ENST00000468380 M0QXV9 152 aa10.99□□□□□ -0.65
LINC00888-201ENST00000468380 UBE2BP63146 152 aa10.99□□□□□ -0.65
LINC00888-201ENST00000468380 SMDT1Q9H4I9 107 aa10.99□□□□□ -0.65
LINC00888-201ENST00000468380 NDUFA1O15239 70 aa10.98□□□□□ -0.65
LINC00888-201ENST00000468380 RAB4AP20338 218 aa10.98□□□□□ -0.65
LINC00888-201ENST00000468380 TMEM241Q24JQ0 296 aa10.98□□□□□ -0.65
LINC00888-201ENST00000468380 FAM104AQ969W3 186 aa10.98□□□□□ -0.65
LINC00888-201ENST00000468380 IGHV3OR16-9A0A0B4J2B5 98 aa10.97□□□□□ -0.65
LINC00888-201ENST00000468380 HMSDA8MTL9 139 aa10.97□□□□□ -0.65
LINC00888-201ENST00000468380 F8WDY8 70 aa10.97□□□□□ -0.65
LINC00888-201ENST00000468380 VCYO14598 125 aa10.97□□□□□ -0.65
LINC00888-201ENST00000468380 ZNF861PO60384 105 aa10.97□□□□□ -0.65
LINC00888-201ENST00000468380 A0A087X002 238 aa10.96□□□□□ -0.65
LINC00888-201ENST00000468380 SMKR1H3BMG3 65 aa10.96□□□□□ -0.65
LINC00888-201ENST00000468380 GATCO43716 136 aaKnown RBP10.96□□□□□ -0.65
LINC00888-201ENST00000468380 FCER1GP30273 86 aa10.96□□□□□ -0.65
LINC00888-201ENST00000468380 TMEM191AQ9H0A3 160 aa10.96□□□□□ -0.65
LINC00888-201ENST00000468380 AMN1Q8IY45 258 aa10.95□□□□□ -0.66
LINC00888-201ENST00000468380 A8MWL6 223 aa10.94□□□□□ -0.66
LINC00888-201ENST00000468380 C9orf129Q5T035 196 aaKnown RBP10.94□□□□□ -0.66
LINC00888-201ENST00000468380 TEX46H3BTG2 121 aa10.93□□□□□ -0.66
LINC00888-201ENST00000468380 KIAA0087Q14695 138 aa10.93□□□□□ -0.66
LINC00888-201ENST00000468380 NRACQ8N912 160 aa10.93□□□□□ -0.66
LINC00888-201ENST00000468380 TIMM21Q9BVV7 248 aa10.93□□□□□ -0.66
LINC00888-201ENST00000468380 SMAGPQ0VAQ4 97 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms