RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 GVQW2A0A096LPI5 108 aaPredicted RBP6.06□□□□□ -1.44
USP39-212ENST00000465514 H7C423 109 aa6.06□□□□□ -1.44
USP39-212ENST00000465514 K7EN84 100 aa6.06□□□□□ -1.44
USP39-212ENST00000465514 NCR2O95944 276 aa6.06□□□□□ -1.44
USP39-212ENST00000465514 APCSP02743 223 aa6.06□□□□□ -1.44
USP39-212ENST00000465514 FGF6P10767 208 aa6.06□□□□□ -1.44
USP39-212ENST00000465514 FOXI1Q12951 378 aa6.06□□□□□ -1.44
USP39-212ENST00000465514 TCTE3Q8IZS6 198 aa6.06□□□□□ -1.44
USP39-212ENST00000465514 OCC1Q8TAD7 63 aa6.06□□□□□ -1.44
USP39-212ENST00000465514 SDHAF1A6NFY7 115 aa6.05□□□□□ -1.44
USP39-212ENST00000465514 REG3GQ6UW15 175 aa6.05□□□□□ -1.44
USP39-212ENST00000465514 SMIM15Q7Z3B0 74 aa6.05□□□□□ -1.44
USP39-212ENST00000465514 OR5A1Q8NGJ0 315 aa6.05□□□□□ -1.44
USP39-212ENST00000465514 FAM231BA6NCW3 169 aa6.04□□□□□ -1.44
USP39-212ENST00000465514 EIF4EBP3O60516 100 aaPredicted RBP6.04□□□□□ -1.44
USP39-212ENST00000465514 PMCHP20382 165 aa6.04□□□□□ -1.44
USP39-212ENST00000465514 XCL1P47992 114 aa6.04□□□□□ -1.44
USP39-212ENST00000465514 TEX261Q6UWH6 196 aa6.04□□□□□ -1.44
USP39-212ENST00000465514 LINC00526Q96FQ7 95 aa6.04□□□□□ -1.44
USP39-212ENST00000465514 IGHV1-58A0A0C4DH39 117 aa6.03□□□□□ -1.44
USP39-212ENST00000465514 LINC00959A0A1B0GUT2 108 aa6.03□□□□□ -1.44
USP39-212ENST00000465514 I3L3M4 83 aa6.03□□□□□ -1.44
USP39-212ENST00000465514 CCL25O15444 150 aa6.03□□□□□ -1.44
USP39-212ENST00000465514 ZNF25P17030 456 aaPredicted RBP6.03□□□□□ -1.44
USP39-212ENST00000465514 TAGLN2P37802 199 aaKnown RBP6.03□□□□□ -1.44
USP39-212ENST00000465514 TMEM101Q96IK0 257 aa6.03□□□□□ -1.44
USP39-212ENST00000465514 BTF3L4Q96K17 158 aa6.03□□□□□ -1.44
USP39-212ENST00000465514 LINC00474Q9P2X8 69 aa6.03□□□□□ -1.44
USP39-212ENST00000465514 KRTAP4-8A0A0G2JLE6 195 aa6.02□□□□□ -1.45
USP39-212ENST00000465514 TRBV6-5A0A0K0K1A5 114 aa6.02□□□□□ -1.45
USP39-212ENST00000465514 GATCO43716 136 aaKnown RBP6.02□□□□□ -1.45
USP39-212ENST00000465514 ESDP10768 282 aa6.02□□□□□ -1.45
USP39-212ENST00000465514 SPINK6Q6UWN8 80 aa6.02□□□□□ -1.45
USP39-212ENST00000465514 CARD19Q96LW7 228 aa6.02□□□□□ -1.45
USP39-212ENST00000465514 A8MWL6 223 aa6.01□□□□□ -1.45
USP39-212ENST00000465514 TSHBP01222 138 aa6.01□□□□□ -1.45
USP39-212ENST00000465514 SRSF9Q13242 221 aaKnown RBP eCLIP6.01□□□□□ -1.45
USP39-212ENST00000465514 SS18Q15532 418 aa6.01□□□□□ -1.45
USP39-212ENST00000465514 SLC51BQ86UW2 128 aa6.01□□□□□ -1.45
USP39-212ENST00000465514 ST20Q9HBF5 79 aa6.01□□□□□ -1.45
USP39-212ENST00000465514 TMEM242Q9NWH2 141 aa6.01□□□□□ -1.45
USP39-212ENST00000465514 PKIGQ9Y2B9 76 aa6.01□□□□□ -1.45
USP39-212ENST00000465514 ZNF561-AS1K7EIQ3 104 aa6□□□□□ -1.45
USP39-212ENST00000465514 SYCNQ0VAF6 134 aa6□□□□□ -1.45
USP39-212ENST00000465514 CD164L2Q6UWJ8 174 aa6□□□□□ -1.45
USP39-212ENST00000465514 Q6ZRP5 223 aa6□□□□□ -1.45
USP39-212ENST00000465514 FAM231DQ6ZW35 169 aa6□□□□□ -1.45
USP39-212ENST00000465514 MRAP2Q96G30 205 aa6□□□□□ -1.45
USP39-212ENST00000465514 CDC42SE2Q9NRR3 84 aa6□□□□□ -1.45
USP39-212ENST00000465514 POLR2KP53803 58 aaKnown RBP5.99□□□□□ -1.45
USP39-212ENST00000465514 MRPL52Q86TS9 123 aaKnown RBP5.99□□□□□ -1.45
USP39-212ENST00000465514 ZNF664Q8N3J9 261 aa5.99□□□□□ -1.45
USP39-212ENST00000465514 BORCS7Q96B45 105 aa5.99□□□□□ -1.45
USP39-212ENST00000465514 FAM210AQ96ND0 272 aa5.99□□□□□ -1.45
USP39-212ENST00000465514 TRBV27A0A0K0K1C4 114 aa5.98□□□□□ -1.45
USP39-212ENST00000465514 LOC107984640A0A0U1RRK4 108 aa5.98□□□□□ -1.45
USP39-212ENST00000465514 A0A1B0GUT8 65 aa5.98□□□□□ -1.45
USP39-212ENST00000465514 TMEM250H0YL14 139 aa5.98□□□□□ -1.45
USP39-212ENST00000465514 RAB4AP20338 218 aa5.98□□□□□ -1.45
USP39-212ENST00000465514 CAMPP49913 170 aa5.98□□□□□ -1.45
USP39-212ENST00000465514 CEBPGP53567 150 aa5.98□□□□□ -1.45
USP39-212ENST00000465514 PTTG1IPP53801 180 aa5.98□□□□□ -1.45
USP39-212ENST00000465514 GAGE2BQ13066 116 aa5.98□□□□□ -1.45
USP39-212ENST00000465514 CT83Q5H943 113 aa5.98□□□□□ -1.45
USP39-212ENST00000465514 TMEM191AQ9H0A3 160 aa5.98□□□□□ -1.45
USP39-212ENST00000465514 IGLV4-69A0A075B6H9 119 aa5.97□□□□□ -1.45
USP39-212ENST00000465514 A0A1W2PNN7 141 aa5.97□□□□□ -1.45
USP39-212ENST00000465514 C7orf77A4D0Y5 90 aa5.97□□□□□ -1.45
USP39-212ENST00000465514 HIGD1CA8MV81 97 aa5.97□□□□□ -1.45
USP39-212ENST00000465514 MALP21145 153 aa5.97□□□□□ -1.45
USP39-212ENST00000465514 ISOC2Q96AB3 205 aa5.97□□□□□ -1.45
USP39-212ENST00000465514 C1orf196B1AJZ1 125 aa5.96□□□□□ -1.46
USP39-212ENST00000465514 SMKR1H3BMG3 65 aa5.96□□□□□ -1.46
USP39-212ENST00000465514 COX7A2LO14548 114 aa5.96□□□□□ -1.46
USP39-212ENST00000465514 VCYO14598 125 aa5.96□□□□□ -1.46
USP39-212ENST00000465514 BLOC1S1P78537 153 aa5.96□□□□□ -1.46
USP39-212ENST00000465514 RNASE13Q5GAN3 156 aaKnown RBP5.96□□□□□ -1.46
USP39-212ENST00000465514 AMN1Q8IY45 258 aa5.96□□□□□ -1.46
USP39-212ENST00000465514 NUP35Q8NFH5 326 aa5.96□□□□□ -1.46
USP39-212ENST00000465514 TSKUQ8WUA8 353 aa5.96□□□□□ -1.46
USP39-212ENST00000465514 FCER1GP30273 86 aa5.95□□□□□ -1.46
USP39-212ENST00000465514 PRR4Q16378 134 aa5.95□□□□□ -1.46
USP39-212ENST00000465514 ALKAL2Q6UX46 152 aa5.95□□□□□ -1.46
USP39-212ENST00000465514 CAMK2N2Q96S95 79 aa5.95□□□□□ -1.46
USP39-212ENST00000465514 SMIM7Q9BQ49 75 aa5.95□□□□□ -1.46
USP39-212ENST00000465514 CSDC2Q9Y534 153 aaKnown RBP5.95□□□□□ -1.46
USP39-212ENST00000465514 TRAV13-1A0A0B4J241 112 aa5.94□□□□□ -1.46
USP39-212ENST00000465514 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.94□□□□□ -1.46
USP39-212ENST00000465514 APOMO95445 188 aa5.94□□□□□ -1.46
USP39-212ENST00000465514 MT-ND6P03923 174 aa5.94□□□□□ -1.46
USP39-212ENST00000465514 SMAGPQ0VAQ4 97 aa5.94□□□□□ -1.46
USP39-212ENST00000465514 C9orf116Q5BN46 136 aaPredicted RBP5.94□□□□□ -1.46
USP39-212ENST00000465514 C5orf38Q86SI9 138 aa5.94□□□□□ -1.46
USP39-212ENST00000465514 LINC01551Q86U37 167 aa5.94□□□□□ -1.46
USP39-212ENST00000465514 C2orf48Q96LS8 159 aa5.94□□□□□ -1.46
USP39-212ENST00000465514 OSTCQ9NRP0 149 aa5.94□□□□□ -1.46
USP39-212ENST00000465514 PSORS1C2Q9UIG4 136 aa5.94□□□□□ -1.46
USP39-212ENST00000465514 UBE2D4Q9Y2X8 147 aa5.94□□□□□ -1.46
USP39-212ENST00000465514 SUMO2P61956 95 aaKnown RBP5.93□□□□□ -1.46
USP39-212ENST00000465514 RPL18AQ02543 176 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms