RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 TSKUQ8WUA8 353 aa11.22□□□□□ -0.61
SSB-206ENST00000461708 IGKV2-24A0A0C4DH68 120 aa11.21□□□□□ -0.61
SSB-206ENST00000461708 PRR3P79522 188 aaKnown RBP11.21□□□□□ -0.61
SSB-206ENST00000461708 ALKAL2Q6UX46 152 aa11.21□□□□□ -0.61
SSB-206ENST00000461708 CDC42SE2Q9NRR3 84 aa11.21□□□□□ -0.61
SSB-206ENST00000461708 A0A096LNI7 61 aa11.2□□□□□ -0.62
SSB-206ENST00000461708 HIGD1CA8MV81 97 aa11.2□□□□□ -0.62
SSB-206ENST00000461708 CCL25O15444 150 aa11.2□□□□□ -0.62
SSB-206ENST00000461708 SS18Q15532 418 aa11.2□□□□□ -0.62
SSB-206ENST00000461708 CD164L2Q6UWJ8 174 aa11.2□□□□□ -0.62
SSB-206ENST00000461708 LINC01551Q86U37 167 aa11.2□□□□□ -0.62
SSB-206ENST00000461708 TMEM242Q9NWH2 141 aa11.2□□□□□ -0.62
SSB-206ENST00000461708 GAS8-AS1O95177 125 aa11.19□□□□□ -0.62
SSB-206ENST00000461708 RAB4AP20338 218 aa11.19□□□□□ -0.62
SSB-206ENST00000461708 ZNF664Q8N3J9 261 aa11.19□□□□□ -0.62
SSB-206ENST00000461708 LINC01600Q96MT4 127 aa11.19□□□□□ -0.62
SSB-206ENST00000461708 SMIM7Q9BQ49 75 aa11.19□□□□□ -0.62
SSB-206ENST00000461708 OSTCQ9NRP0 149 aa11.19□□□□□ -0.62
SSB-206ENST00000461708 PPP1R17O96001 155 aa11.18□□□□□ -0.62
SSB-206ENST00000461708 AKAP14Q86UN6 197 aa11.18□□□□□ -0.62
SSB-206ENST00000461708 CARD19Q96LW7 228 aa11.18□□□□□ -0.62
SSB-206ENST00000461708 CSDC2Q9Y534 153 aaKnown RBP11.18□□□□□ -0.62
SSB-206ENST00000461708 C7orf77A4D0Y5 90 aa11.17□□□□□ -0.62
SSB-206ENST00000461708 CEBPGP53567 150 aa11.17□□□□□ -0.62
SSB-206ENST00000461708 TNXBP22105 4242 aa11.17□□□□□ -0.62
SSB-206ENST00000461708 VCYO14598 125 aa11.16□□□□□ -0.62
SSB-206ENST00000461708 SYCNQ0VAF6 134 aa11.16□□□□□ -0.62
SSB-206ENST00000461708 SMAGPQ0VAQ4 97 aa11.16□□□□□ -0.62
SSB-206ENST00000461708 EIF5A2Q9GZV4 153 aaKnown RBP11.16□□□□□ -0.62
SSB-206ENST00000461708 ZNF727A8MUV8 499 aa11.15□□□□□ -0.62
SSB-206ENST00000461708 C1orf196B1AJZ1 125 aa11.15□□□□□ -0.62
SSB-206ENST00000461708 ZNF561-AS1K7EIQ3 104 aa11.15□□□□□ -0.62
SSB-206ENST00000461708 SPINK6Q6UWN8 80 aa11.15□□□□□ -0.62
SSB-206ENST00000461708 AMN1Q8IY45 258 aa11.15□□□□□ -0.62
SSB-206ENST00000461708 RIGQ13278 110 aa11.14□□□□□ -0.63
SSB-206ENST00000461708 ISOC2Q96AB3 205 aa11.14□□□□□ -0.63
SSB-206ENST00000461708 LINC00526Q96FQ7 95 aa11.14□□□□□ -0.63
SSB-206ENST00000461708 FCER1GP30273 86 aa11.13□□□□□ -0.63
SSB-206ENST00000461708 V9GYV3 84 aa11.13□□□□□ -0.63
SSB-206ENST00000461708 SRP19P09132 144 aaKnown RBP11.12□□□□□ -0.63
SSB-206ENST00000461708 CAMPP49913 170 aa11.12□□□□□ -0.63
SSB-206ENST00000461708 SUMO2P61956 95 aaKnown RBP11.12□□□□□ -0.63
SSB-206ENST00000461708 Q6ZRP5 223 aa11.12□□□□□ -0.63
SSB-206ENST00000461708 NRACQ8N912 160 aa11.12□□□□□ -0.63
SSB-206ENST00000461708 NUP35Q8NFH5 326 aa11.12□□□□□ -0.63
SSB-206ENST00000461708 A0A0J9YXV3 536 aa11.11□□□□□ -0.63
SSB-206ENST00000461708 COX7A2LO14548 114 aa11.11□□□□□ -0.63
SSB-206ENST00000461708 PPP1R2P9O14990 202 aa11.11□□□□□ -0.63
SSB-206ENST00000461708 PTTG1IPP53801 180 aa11.11□□□□□ -0.63
SSB-206ENST00000461708 SRSF9Q13242 221 aaKnown RBP eCLIP11.11□□□□□ -0.63
SSB-206ENST00000461708 FAM74A3Q4VXF1 159 aa11.11□□□□□ -0.63
SSB-206ENST00000461708 REG3GQ6UW15 175 aa11.11□□□□□ -0.63
SSB-206ENST00000461708 KIR2DL4Q99706 377 aa11.11□□□□□ -0.63
SSB-206ENST00000461708 TIMM21Q9BVV7 248 aa11.11□□□□□ -0.63
SSB-206ENST00000461708 UBE2D4Q9Y2X8 147 aa11.11□□□□□ -0.63
SSB-206ENST00000461708 LOC107984640A0A0U1RRK4 108 aa11.1□□□□□ -0.63
SSB-206ENST00000461708 MALP21145 153 aa11.1□□□□□ -0.63
SSB-206ENST00000461708 NAT8BQ9UHF3 227 aa11.1□□□□□ -0.63
SSB-206ENST00000461708 IGLV4-69A0A075B6H9 119 aa11.09□□□□□ -0.63
SSB-206ENST00000461708 KRTAP10-8P60410 259 aa11.09□□□□□ -0.63
SSB-206ENST00000461708 TMEM241Q24JQ0 296 aa11.09□□□□□ -0.63
SSB-206ENST00000461708 C2orf48Q96LS8 159 aa11.09□□□□□ -0.63
SSB-206ENST00000461708 LINC00862A6NCI5 91 aa11.08□□□□□ -0.64
SSB-206ENST00000461708 SMKR1H3BMG3 65 aa11.08□□□□□ -0.64
SSB-206ENST00000461708 TCAPO15273 167 aa11.08□□□□□ -0.64
SSB-206ENST00000461708 RPL32P62910 135 aaKnown RBP11.08□□□□□ -0.64
SSB-206ENST00000461708 TMEM18Q96B42 140 aa11.08□□□□□ -0.64
SSB-206ENST00000461708 C20orf78Q9BR46 151 aa11.08□□□□□ -0.64
SSB-206ENST00000461708 LRP2P98164 4655 aa11.07□□□□□ -0.64
SSB-206ENST00000461708 TRBV24-1A0A075B6N3 115 aa11.07□□□□□ -0.64
SSB-206ENST00000461708 FAM104BQ5XKR9 115 aa11.07□□□□□ -0.64
SSB-206ENST00000461708 A0A1B0GW15 77 aa11.06□□□□□ -0.64
SSB-206ENST00000461708 APOMO95445 188 aa11.06□□□□□ -0.64
SSB-206ENST00000461708 RNF151Q2KHN1 245 aa11.06□□□□□ -0.64
SSB-206ENST00000461708 MRPL51Q4U2R6 128 aaKnown RBP11.06□□□□□ -0.64
SSB-206ENST00000461708 CAMK2N2Q96S95 79 aa11.06□□□□□ -0.64
SSB-206ENST00000461708 TRAV13-1A0A0B4J241 112 aa11.05□□□□□ -0.64
SSB-206ENST00000461708 SMIM27A0A1W2PRY6 76 aa11.05□□□□□ -0.64
SSB-206ENST00000461708 RPL23P62829 140 aaKnown RBP11.05□□□□□ -0.64
SSB-206ENST00000461708 GAGE2BQ13066 116 aa11.05□□□□□ -0.64
SSB-206ENST00000461708 hCG_2014768A0A024R1R8 64 aa11.03□□□□□ -0.64
SSB-206ENST00000461708 F8WDY8 70 aa11.03□□□□□ -0.64
SSB-206ENST00000461708 RNASE13Q5GAN3 156 aaKnown RBP11.03□□□□□ -0.64
SSB-206ENST00000461708 Q6ZUT4 128 aa11.03□□□□□ -0.64
SSB-206ENST00000461708 OR10D4PQ8NGN7 298 aa11.03□□□□□ -0.64
SSB-206ENST00000461708 NAT8Q9UHE5 227 aa11.03□□□□□ -0.64
SSB-206ENST00000461708 A0A1W2PNN7 141 aa11.02□□□□□ -0.65
SSB-206ENST00000461708 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.02□□□□□ -0.65
SSB-206ENST00000461708 CKS2P33552 79 aa11.02□□□□□ -0.65
SSB-206ENST00000461708 C5orf38Q86SI9 138 aa11.02□□□□□ -0.65
SSB-206ENST00000461708 SPANXA1Q9NS26 97 aa11.02□□□□□ -0.65
SSB-206ENST00000461708 S100A8P05109 93 aa11.01□□□□□ -0.65
SSB-206ENST00000461708 ADIRFQ15847 76 aa11.01□□□□□ -0.65
SSB-206ENST00000461708 SMDT1Q9H4I9 107 aa11.01□□□□□ -0.65
SSB-206ENST00000461708 TNFRSF6BO95407 300 aa11□□□□□ -0.65
SSB-206ENST00000461708 MRPS36P82909 103 aaKnown RBP11□□□□□ -0.65
SSB-206ENST00000461708 SPAG11BQ08648 103 aa11□□□□□ -0.65
SSB-206ENST00000461708 C9orf116Q5BN46 136 aaPredicted RBP11□□□□□ -0.65
SSB-206ENST00000461708 FAM104AQ969W3 186 aa11□□□□□ -0.65
SSB-206ENST00000461708 SMIM2Q9BVW6 85 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms