RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 CHCHD10Q8WYQ3 142 aaPredicted RBP6.42□□□□□ -1.38
HDLBP-228ENST00000459788 PKHD1L1Q86WI1 4243 aa6.41□□□□□ -1.38
HDLBP-228ENST00000459788 SMIM27A0A1W2PRY6 76 aa6.41□□□□□ -1.38
HDLBP-228ENST00000459788 GAGE12HA6NDE8 117 aa6.41□□□□□ -1.38
HDLBP-228ENST00000459788 TSHBP01222 138 aa6.41□□□□□ -1.38
HDLBP-228ENST00000459788 S100A8P05109 93 aa6.41□□□□□ -1.38
HDLBP-228ENST00000459788 RPS10P46783 165 aaKnown RBP6.41□□□□□ -1.38
HDLBP-228ENST00000459788 RPL23P62829 140 aaKnown RBP6.41□□□□□ -1.38
HDLBP-228ENST00000459788 RPL32P62910 135 aaKnown RBP6.41□□□□□ -1.38
HDLBP-228ENST00000459788 C20orf78Q9BR46 151 aa6.41□□□□□ -1.38
HDLBP-228ENST00000459788 TRBV24-1A0A075B6N3 115 aa6.4□□□□□ -1.38
HDLBP-228ENST00000459788 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.4□□□□□ -1.38
HDLBP-228ENST00000459788 IGKV2-29A2NJV5 120 aaPredicted RBP6.4□□□□□ -1.38
HDLBP-228ENST00000459788 C7orf77A4D0Y5 90 aa6.4□□□□□ -1.38
HDLBP-228ENST00000459788 RPL37AP61513 92 aaKnown RBP6.4□□□□□ -1.38
HDLBP-228ENST00000459788 SUMO2P61956 95 aaKnown RBP6.4□□□□□ -1.38
HDLBP-228ENST00000459788 SS18Q15532 418 aa6.4□□□□□ -1.38
HDLBP-228ENST00000459788 FAM104BQ5XKR9 115 aa6.4□□□□□ -1.38
HDLBP-228ENST00000459788 TMEM18Q96B42 140 aa6.4□□□□□ -1.38
HDLBP-228ENST00000459788 KIR2DL4Q99706 377 aa6.4□□□□□ -1.38
HDLBP-228ENST00000459788 TIMM21Q9BVV7 248 aa6.4□□□□□ -1.38
HDLBP-228ENST00000459788 CDC42SE2Q9NRR3 84 aa6.4□□□□□ -1.38
HDLBP-228ENST00000459788 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.4□□□□□ -1.38
HDLBP-228ENST00000459788 IGHV1-58A0A0C4DH39 117 aa6.39□□□□□ -1.39
HDLBP-228ENST00000459788 LINC00959A0A1B0GUT2 108 aa6.39□□□□□ -1.39
HDLBP-228ENST00000459788 SLPIP03973 132 aa6.39□□□□□ -1.39
HDLBP-228ENST00000459788 FOXI1Q12951 378 aa6.39□□□□□ -1.39
HDLBP-228ENST00000459788 ADIRFQ15847 76 aa6.39□□□□□ -1.39
HDLBP-228ENST00000459788 CD164L2Q6UWJ8 174 aa6.39□□□□□ -1.39
HDLBP-228ENST00000459788 AMN1Q8IY45 258 aa6.39□□□□□ -1.39
HDLBP-228ENST00000459788 ZNF664Q8N3J9 261 aa6.39□□□□□ -1.39
HDLBP-228ENST00000459788 NRACQ8N912 160 aa6.39□□□□□ -1.39
HDLBP-228ENST00000459788 SPACA4Q8TDM5 124 aa6.39□□□□□ -1.39
HDLBP-228ENST00000459788 TMEM242Q9NWH2 141 aa6.39□□□□□ -1.39
HDLBP-228ENST00000459788 PLAC8Q9NZF1 115 aa6.39□□□□□ -1.39
HDLBP-228ENST00000459788 LINC00474Q9P2X8 69 aa6.39□□□□□ -1.39
HDLBP-228ENST00000459788 F8W036 122 aa6.38□□□□□ -1.39
HDLBP-228ENST00000459788 PHOX2AO14813 284 aa6.38□□□□□ -1.39
HDLBP-228ENST00000459788 PPBPP02775 128 aa6.38□□□□□ -1.39
HDLBP-228ENST00000459788 FCER1GP30273 86 aa6.38□□□□□ -1.39
HDLBP-228ENST00000459788 IGKV3OR2-268A0A0C4DH90 116 aa6.37□□□□□ -1.39
HDLBP-228ENST00000459788 A0A1B0GVG6 124 aa6.37□□□□□ -1.39
HDLBP-228ENST00000459788 C1orf196B1AJZ1 125 aa6.37□□□□□ -1.39
HDLBP-228ENST00000459788 GAS8-AS1O95177 125 aa6.37□□□□□ -1.39
HDLBP-228ENST00000459788 ATP5L2Q7Z4Y8 100 aa6.37□□□□□ -1.39
HDLBP-228ENST00000459788 FAT3Q8TDW7 4589 aa6.37□□□□□ -1.39
HDLBP-228ENST00000459788 LRP1Q07954 4544 aaKnown RBP6.36□□□□□ -1.39
HDLBP-228ENST00000459788 A0A087WYN8 130 aa6.36□□□□□ -1.39
HDLBP-228ENST00000459788 C9JQL5 133 aa6.36□□□□□ -1.39
HDLBP-228ENST00000459788 PANO1I0J062 215 aa6.36□□□□□ -1.39
HDLBP-228ENST00000459788 CKS2P33552 79 aa6.36□□□□□ -1.39
HDLBP-228ENST00000459788 HBBP68871 147 aa6.36□□□□□ -1.39
HDLBP-228ENST00000459788 MRPL51Q4U2R6 128 aaKnown RBP6.36□□□□□ -1.39
HDLBP-228ENST00000459788 SERTAD4-AS1Q5TG53 156 aa6.36□□□□□ -1.39
HDLBP-228ENST00000459788 Q6ZRU5 148 aa6.36□□□□□ -1.39
HDLBP-228ENST00000459788 UBE2D4Q9Y2X8 147 aa6.36□□□□□ -1.39
HDLBP-228ENST00000459788 A0A1B0GXF2 115 aa6.35□□□□□ -1.39
HDLBP-228ENST00000459788 F8WDY8 70 aa6.35□□□□□ -1.39
HDLBP-228ENST00000459788 XCL1P47992 114 aa6.35□□□□□ -1.39
HDLBP-228ENST00000459788 COX6A2Q02221 97 aa6.35□□□□□ -1.39
HDLBP-228ENST00000459788 PNRC1Q12796 327 aaPredicted RBP6.35□□□□□ -1.39
HDLBP-228ENST00000459788 C7orf33Q8WU49 177 aa6.35□□□□□ -1.39
HDLBP-228ENST00000459788 DPH3Q96FX2 82 aa6.35□□□□□ -1.39
HDLBP-228ENST00000459788 ZNF561-AS1K7EIQ3 104 aa6.34□□□□□ -1.39
HDLBP-228ENST00000459788 CAMPP49913 170 aa6.34□□□□□ -1.39
HDLBP-228ENST00000459788 SRSF3P84103 164 aaKnown RBP6.34□□□□□ -1.39
HDLBP-228ENST00000459788 HIGD2BQ4VC39 106 aa6.34□□□□□ -1.39
HDLBP-228ENST00000459788 C2orf48Q96LS8 159 aa6.34□□□□□ -1.39
HDLBP-228ENST00000459788 SMIM2Q9BVW6 85 aa6.34□□□□□ -1.39
HDLBP-228ENST00000459788 SPANXA1Q9NS26 97 aa6.34□□□□□ -1.39
HDLBP-228ENST00000459788 LAMTOR2Q9Y2Q5 125 aa6.34□□□□□ -1.39
HDLBP-228ENST00000459788 SMKR1H3BMG3 65 aa6.33□□□□□ -1.4
HDLBP-228ENST00000459788 COX7A2LO14548 114 aa6.33□□□□□ -1.4
HDLBP-228ENST00000459788 TNFRSF6BO95407 300 aa6.33□□□□□ -1.4
HDLBP-228ENST00000459788 APOMO95445 188 aa6.33□□□□□ -1.4
HDLBP-228ENST00000459788 MRPS36P82909 103 aaKnown RBP6.33□□□□□ -1.4
HDLBP-228ENST00000459788 SYCNQ0VAF6 134 aa6.33□□□□□ -1.4
HDLBP-228ENST00000459788 CARD19Q96LW7 228 aa6.33□□□□□ -1.4
HDLBP-228ENST00000459788 PRSS47A8MTI9 375 aa6.32□□□□□ -1.4
HDLBP-228ENST00000459788 CHTF8P0CG12 524 aa6.32□□□□□ -1.4
HDLBP-228ENST00000459788 MALP21145 153 aa6.32□□□□□ -1.4
HDLBP-228ENST00000459788 RNF151Q2KHN1 245 aa6.32□□□□□ -1.4
HDLBP-228ENST00000459788 ORMDL3Q8N138 153 aa6.32□□□□□ -1.4
HDLBP-228ENST00000459788 PRSS3P2Q8NHM4 247 aa6.32□□□□□ -1.4
HDLBP-228ENST00000459788 ANAPC16Q96DE5 110 aa6.32□□□□□ -1.4
HDLBP-228ENST00000459788 IGLV4-69A0A075B6H9 119 aa6.31□□□□□ -1.4
HDLBP-228ENST00000459788 LOC107984640A0A0U1RRK4 108 aa6.31□□□□□ -1.4
HDLBP-228ENST00000459788 D6R8Y8 96 aa6.31□□□□□ -1.4
HDLBP-228ENST00000459788 RAB14P61106 215 aa6.31□□□□□ -1.4
HDLBP-228ENST00000459788 MAJINQ3KP22 176 aa6.31□□□□□ -1.4
HDLBP-228ENST00000459788 OR10D4PQ8NGN7 298 aa6.31□□□□□ -1.4
HDLBP-228ENST00000459788 PYGO1Q9Y3Y4 419 aa6.31□□□□□ -1.4
HDLBP-228ENST00000459788 A0A096LNI7 61 aa6.3□□□□□ -1.4
HDLBP-228ENST00000459788 K7EMI3 77 aa6.3□□□□□ -1.4
HDLBP-228ENST00000459788 MT-ND4LP03901 98 aa6.3□□□□□ -1.4
HDLBP-228ENST00000459788 NPSP0C0P6 89 aa6.3□□□□□ -1.4
HDLBP-228ENST00000459788 MRPL54Q6P161 138 aaKnown RBP6.3□□□□□ -1.4
HDLBP-228ENST00000459788 STPG4Q8N801 248 aa6.3□□□□□ -1.4
HDLBP-228ENST00000459788 TRAV13-1A0A0B4J241 112 aa6.29□□□□□ -1.4
HDLBP-228ENST00000459788 IGKV2-24A0A0C4DH68 120 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms