RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 A0A096LNI7 61 aa6.82□□□□□ -1.32
USP1-204ENST00000452143 SDHAF1A6NFY7 115 aa6.82□□□□□ -1.32
USP1-204ENST00000452143 FOXI1Q12951 378 aa6.82□□□□□ -1.32
USP1-204ENST00000452143 OR5A1Q8NGJ0 315 aa6.82□□□□□ -1.32
USP1-204ENST00000452143 FAM210AQ96ND0 272 aa6.82□□□□□ -1.32
USP1-204ENST00000452143 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.81□□□□□ -1.32
USP1-204ENST00000452143 A0A0J9YXV3 536 aa6.81□□□□□ -1.32
USP1-204ENST00000452143 IGKV2-29A2NJV5 120 aaPredicted RBP6.81□□□□□ -1.32
USP1-204ENST00000452143 SPINK6Q6UWN8 80 aa6.81□□□□□ -1.32
USP1-204ENST00000452143 RPL39LQ96EH5 51 aaKnown RBP6.81□□□□□ -1.32
USP1-204ENST00000452143 BTF3L4Q96K17 158 aa6.81□□□□□ -1.32
USP1-204ENST00000452143 RNASE7Q9H1E1 156 aaKnown RBP6.81□□□□□ -1.32
USP1-204ENST00000452143 IGHV1-58A0A0C4DH39 117 aa6.8□□□□□ -1.32
USP1-204ENST00000452143 TRBV6-5A0A0K0K1A5 114 aa6.8□□□□□ -1.32
USP1-204ENST00000452143 I3L3M4 83 aa6.8□□□□□ -1.32
USP1-204ENST00000452143 K7EN84 100 aa6.8□□□□□ -1.32
USP1-204ENST00000452143 XCL1P47992 114 aa6.8□□□□□ -1.32
USP1-204ENST00000452143 REG3GQ6UW15 175 aa6.8□□□□□ -1.32
USP1-204ENST00000452143 TMEM101Q96IK0 257 aa6.8□□□□□ -1.32
USP1-204ENST00000452143 CARD19Q96LW7 228 aa6.8□□□□□ -1.32
USP1-204ENST00000452143 LYPD6BQ8NI32 183 aa6.79□□□□□ -1.32
USP1-204ENST00000452143 MRAP2Q96G30 205 aa6.79□□□□□ -1.32
USP1-204ENST00000452143 LINC00959A0A1B0GUT2 108 aa6.78□□□□□ -1.32
USP1-204ENST00000452143 CCL25O15444 150 aa6.78□□□□□ -1.32
USP1-204ENST00000452143 ESDP10768 282 aa6.78□□□□□ -1.32
USP1-204ENST00000452143 PMCHP20382 165 aa6.78□□□□□ -1.32
USP1-204ENST00000452143 CT83Q5H943 113 aa6.78□□□□□ -1.32
USP1-204ENST00000452143 Q6ZRP5 223 aa6.78□□□□□ -1.32
USP1-204ENST00000452143 MRPL52Q86TS9 123 aaKnown RBP6.78□□□□□ -1.32
USP1-204ENST00000452143 OCC1Q8TAD7 63 aa6.78□□□□□ -1.32
USP1-204ENST00000452143 FAM231BA6NCW3 169 aa6.77□□□□□ -1.33
USP1-204ENST00000452143 A8MWL6 223 aa6.77□□□□□ -1.33
USP1-204ENST00000452143 TMEM250H0YL14 139 aa6.77□□□□□ -1.33
USP1-204ENST00000452143 ZNF561-AS1K7EIQ3 104 aa6.77□□□□□ -1.33
USP1-204ENST00000452143 FOXA3P55318 350 aaPredicted RBP6.77□□□□□ -1.33
USP1-204ENST00000452143 SS18Q15532 418 aa6.77□□□□□ -1.33
USP1-204ENST00000452143 CD164L2Q6UWJ8 174 aa6.77□□□□□ -1.33
USP1-204ENST00000452143 FAM231DQ6ZW35 169 aa6.77□□□□□ -1.33
USP1-204ENST00000452143 SLC51BQ86UW2 128 aa6.77□□□□□ -1.33
USP1-204ENST00000452143 BORCS7Q96B45 105 aa6.77□□□□□ -1.33
USP1-204ENST00000452143 GATCO43716 136 aaKnown RBP6.76□□□□□ -1.33
USP1-204ENST00000452143 TSHBP01222 138 aa6.76□□□□□ -1.33
USP1-204ENST00000452143 CAMPP49913 170 aa6.76□□□□□ -1.33
USP1-204ENST00000452143 KRTAP10-8P60410 259 aa6.76□□□□□ -1.33
USP1-204ENST00000452143 SYCNQ0VAF6 134 aa6.76□□□□□ -1.33
USP1-204ENST00000452143 ISOC2Q96AB3 205 aa6.76□□□□□ -1.33
USP1-204ENST00000452143 ST20Q9HBF5 79 aa6.76□□□□□ -1.33
USP1-204ENST00000452143 CDC42SE2Q9NRR3 84 aa6.76□□□□□ -1.33
USP1-204ENST00000452143 TRBV27A0A0K0K1C4 114 aa6.75□□□□□ -1.33
USP1-204ENST00000452143 C7orf77A4D0Y5 90 aa6.75□□□□□ -1.33
USP1-204ENST00000452143 PTTG1IPP53801 180 aa6.75□□□□□ -1.33
USP1-204ENST00000452143 SRSF9Q13242 221 aaKnown RBP eCLIP6.75□□□□□ -1.33
USP1-204ENST00000452143 TCTE3Q8IZS6 198 aa6.75□□□□□ -1.33
USP1-204ENST00000452143 ZNF664Q8N3J9 261 aa6.75□□□□□ -1.33
USP1-204ENST00000452143 LINC00526Q96FQ7 95 aa6.75□□□□□ -1.33
USP1-204ENST00000452143 TMEM242Q9NWH2 141 aa6.75□□□□□ -1.33
USP1-204ENST00000452143 LOC107984640A0A0U1RRK4 108 aa6.74□□□□□ -1.33
USP1-204ENST00000452143 POLR2KP53803 58 aaKnown RBP6.74□□□□□ -1.33
USP1-204ENST00000452143 SMAGPQ0VAQ4 97 aa6.74□□□□□ -1.33
USP1-204ENST00000452143 TMEM191AQ9H0A3 160 aa6.74□□□□□ -1.33
USP1-204ENST00000452143 CSDC2Q9Y534 153 aaKnown RBP6.74□□□□□ -1.33
USP1-204ENST00000452143 A0A1B0GUT8 65 aa6.73□□□□□ -1.33
USP1-204ENST00000452143 C1orf196B1AJZ1 125 aa6.73□□□□□ -1.33
USP1-204ENST00000452143 IGLV4-69A0A075B6H9 119 aa6.72□□□□□ -1.33
USP1-204ENST00000452143 HIGD1CA8MV81 97 aa6.72□□□□□ -1.33
USP1-204ENST00000452143 COX7A2LO14548 114 aa6.72□□□□□ -1.33
USP1-204ENST00000452143 GAS8-AS1O95177 125 aa6.72□□□□□ -1.33
USP1-204ENST00000452143 APOMO95445 188 aa6.72□□□□□ -1.33
USP1-204ENST00000452143 PPP1R17O96001 155 aa6.72□□□□□ -1.33
USP1-204ENST00000452143 MALP21145 153 aa6.72□□□□□ -1.33
USP1-204ENST00000452143 ODF1Q14990 250 aa6.72□□□□□ -1.33
USP1-204ENST00000452143 TSKUQ8WUA8 353 aa6.72□□□□□ -1.33
USP1-204ENST00000452143 RAB4AP20338 218 aa6.71□□□□□ -1.34
USP1-204ENST00000452143 FCER1GP30273 86 aa6.71□□□□□ -1.34
USP1-204ENST00000452143 GAGE2BQ13066 116 aa6.71□□□□□ -1.34
USP1-204ENST00000452143 NUP35Q8NFH5 326 aa6.71□□□□□ -1.34
USP1-204ENST00000452143 C2orf48Q96LS8 159 aa6.71□□□□□ -1.34
USP1-204ENST00000452143 CAMK2N2Q96S95 79 aa6.71□□□□□ -1.34
USP1-204ENST00000452143 VCYO14598 125 aa6.7□□□□□ -1.34
USP1-204ENST00000452143 BLOC1S1P78537 153 aa6.7□□□□□ -1.34
USP1-204ENST00000452143 LINC01551Q86U37 167 aa6.7□□□□□ -1.34
USP1-204ENST00000452143 AMN1Q8IY45 258 aa6.7□□□□□ -1.34
USP1-204ENST00000452143 KIR2DL4Q99706 377 aa6.7□□□□□ -1.34
USP1-204ENST00000452143 UBE2D4Q9Y2X8 147 aa6.7□□□□□ -1.34
USP1-204ENST00000452143 A0A1W2PNN7 141 aa6.69□□□□□ -1.34
USP1-204ENST00000452143 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.69□□□□□ -1.34
USP1-204ENST00000452143 PPP1R2P9O14990 202 aa6.69□□□□□ -1.34
USP1-204ENST00000452143 CEBPGP53567 150 aa6.69□□□□□ -1.34
USP1-204ENST00000452143 SUMO2P61956 95 aaKnown RBP6.69□□□□□ -1.34
USP1-204ENST00000452143 C9orf116Q5BN46 136 aaPredicted RBP6.69□□□□□ -1.34
USP1-204ENST00000452143 SMIM7Q9BQ49 75 aa6.69□□□□□ -1.34
USP1-204ENST00000452143 PSORS1C2Q9UIG4 136 aa6.69□□□□□ -1.34
USP1-204ENST00000452143 MT-ND6P03923 174 aa6.68□□□□□ -1.34
USP1-204ENST00000452143 RPL18AQ02543 176 aaKnown RBP6.68□□□□□ -1.34
USP1-204ENST00000452143 RIGQ13278 110 aa6.68□□□□□ -1.34
USP1-204ENST00000452143 RNF151Q2KHN1 245 aa6.68□□□□□ -1.34
USP1-204ENST00000452143 NRACQ8N912 160 aa6.68□□□□□ -1.34
USP1-204ENST00000452143 OR10D4PQ8NGN7 298 aa6.68□□□□□ -1.34
USP1-204ENST00000452143 TMEM18Q96B42 140 aa6.68□□□□□ -1.34
USP1-204ENST00000452143 TIMM21Q9BVV7 248 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms