RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 IGLV4-60A0A075B6I1 120 aa7.13□□□□□ -1.27
NPIPB3-202ENST00000448012 A0A1B0GUT8 65 aa7.13□□□□□ -1.27
NPIPB3-202ENST00000448012 FAM231BA6NCW3 169 aa7.13□□□□□ -1.27
NPIPB3-202ENST00000448012 SDHAF1A6NFY7 115 aa7.13□□□□□ -1.27
NPIPB3-202ENST00000448012 I3L3M4 83 aa7.13□□□□□ -1.27
NPIPB3-202ENST00000448012 S100A6P06703 90 aa7.13□□□□□ -1.27
NPIPB3-202ENST00000448012 RIGQ13278 110 aa7.13□□□□□ -1.27
NPIPB3-202ENST00000448012 CIRBP-AS1Q8TBR5 109 aa7.13□□□□□ -1.27
NPIPB3-202ENST00000448012 RPL39LQ96EH5 51 aaKnown RBP7.13□□□□□ -1.27
NPIPB3-202ENST00000448012 GFRA4Q9GZZ7 299 aa7.13□□□□□ -1.27
NPIPB3-202ENST00000448012 ST20Q9HBF5 79 aa7.13□□□□□ -1.27
NPIPB3-202ENST00000448012 HIGD1CA8MV81 97 aa7.12□□□□□ -1.27
NPIPB3-202ENST00000448012 PPP1R17O96001 155 aa7.12□□□□□ -1.27
NPIPB3-202ENST00000448012 SMAGPQ0VAQ4 97 aa7.12□□□□□ -1.27
NPIPB3-202ENST00000448012 COX19Q49B96 90 aa7.12□□□□□ -1.27
NPIPB3-202ENST00000448012 C9orf163Q8N9P6 203 aa7.12□□□□□ -1.27
NPIPB3-202ENST00000448012 IGHV3-64A0A075B6Q5 118 aa7.11□□□□□ -1.27
NPIPB3-202ENST00000448012 SMIM27A0A1W2PRY6 76 aa7.11□□□□□ -1.27
NPIPB3-202ENST00000448012 GAGE12HA6NDE8 117 aa7.11□□□□□ -1.27
NPIPB3-202ENST00000448012 TRGC2P03986 189 aa7.11□□□□□ -1.27
NPIPB3-202ENST00000448012 FGF6P10767 208 aa7.11□□□□□ -1.27
NPIPB3-202ENST00000448012 ZNF25P17030 456 aaPredicted RBP7.11□□□□□ -1.27
NPIPB3-202ENST00000448012 FOXA3P55318 350 aaPredicted RBP7.11□□□□□ -1.27
NPIPB3-202ENST00000448012 MRAP2Q96G30 205 aa7.11□□□□□ -1.27
NPIPB3-202ENST00000448012 TMEM191AQ9H0A3 160 aa7.11□□□□□ -1.27
NPIPB3-202ENST00000448012 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.1□□□□□ -1.27
NPIPB3-202ENST00000448012 TRBV6-5A0A0K0K1A5 114 aa7.1□□□□□ -1.27
NPIPB3-202ENST00000448012 IGKV2-29A2NJV5 120 aaPredicted RBP7.1□□□□□ -1.27
NPIPB3-202ENST00000448012 MT-ND6P03923 174 aa7.1□□□□□ -1.27
NPIPB3-202ENST00000448012 FCER1GP30273 86 aa7.1□□□□□ -1.27
NPIPB3-202ENST00000448012 KRTAP26-1Q6PEX3 210 aa7.1□□□□□ -1.27
NPIPB3-202ENST00000448012 OR5A1Q8NGJ0 315 aa7.1□□□□□ -1.27
NPIPB3-202ENST00000448012 PHOX2AO14813 284 aa7.09□□□□□ -1.27
NPIPB3-202ENST00000448012 HIST1H2BKO60814 126 aa7.09□□□□□ -1.27
NPIPB3-202ENST00000448012 HIST1H2BJP06899 126 aa7.09□□□□□ -1.27
NPIPB3-202ENST00000448012 HIST1H2BOP23527 126 aa7.09□□□□□ -1.27
NPIPB3-202ENST00000448012 HIST1H2BBP33778 126 aa7.09□□□□□ -1.27
NPIPB3-202ENST00000448012 HIST1H2BDP58876 126 aa7.09□□□□□ -1.27
NPIPB3-202ENST00000448012 RPL37AP61513 92 aaKnown RBP7.09□□□□□ -1.27
NPIPB3-202ENST00000448012 CNBPP62633 177 aaKnown RBP7.09□□□□□ -1.27
NPIPB3-202ENST00000448012 HIST1H2BCP62807 126 aa7.09□□□□□ -1.27
NPIPB3-202ENST00000448012 HIST2H2BEQ16778 126 aa7.09□□□□□ -1.27
NPIPB3-202ENST00000448012 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.09□□□□□ -1.27
NPIPB3-202ENST00000448012 CHCHD10Q8WYQ3 142 aaPredicted RBP7.09□□□□□ -1.27
NPIPB3-202ENST00000448012 HIST1H2BHQ93079 126 aa7.09□□□□□ -1.27
NPIPB3-202ENST00000448012 HIST1H2BNQ99877 126 aa7.09□□□□□ -1.27
NPIPB3-202ENST00000448012 HIST1H2BMQ99879 126 aa7.09□□□□□ -1.27
NPIPB3-202ENST00000448012 NAT8BQ9UHF3 227 aa7.09□□□□□ -1.27
NPIPB3-202ENST00000448012 PKIGQ9Y2B9 76 aa7.09□□□□□ -1.27
NPIPB3-202ENST00000448012 C5orf52A6NGY3 159 aa7.08□□□□□ -1.28
NPIPB3-202ENST00000448012 VCYO14598 125 aa7.08□□□□□ -1.28
NPIPB3-202ENST00000448012 SS18Q15532 418 aa7.08□□□□□ -1.28
NPIPB3-202ENST00000448012 ATP5L2Q7Z4Y8 100 aa7.08□□□□□ -1.28
NPIPB3-202ENST00000448012 KIR2DL4Q99706 377 aa7.08□□□□□ -1.28
NPIPB3-202ENST00000448012 TRAPPC1Q9Y5R8 145 aa7.08□□□□□ -1.28
NPIPB3-202ENST00000448012 A0A1B0GW15 77 aa7.07□□□□□ -1.28
NPIPB3-202ENST00000448012 S100A8P05109 93 aa7.07□□□□□ -1.28
NPIPB3-202ENST00000448012 RAB4AP20338 218 aa7.07□□□□□ -1.28
NPIPB3-202ENST00000448012 SNRPEP62304 92 aaKnown RBP7.07□□□□□ -1.28
NPIPB3-202ENST00000448012 MRPL54Q6P161 138 aaKnown RBP7.07□□□□□ -1.28
NPIPB3-202ENST00000448012 AMN1Q8IY45 258 aa7.07□□□□□ -1.28
NPIPB3-202ENST00000448012 TMEM18Q96B42 140 aa7.07□□□□□ -1.28
NPIPB3-202ENST00000448012 GNB1LQ9BYB4 327 aa7.07□□□□□ -1.28
NPIPB3-202ENST00000448012 FAT1Q14517 4588 aa7.06□□□□□ -1.28
NPIPB3-202ENST00000448012 XCL1P47992 114 aa7.06□□□□□ -1.28
NPIPB3-202ENST00000448012 NDUFA6P56556 154 aa7.06□□□□□ -1.28
NPIPB3-202ENST00000448012 FABP9Q0Z7S8 132 aa7.06□□□□□ -1.28
NPIPB3-202ENST00000448012 HIGD2BQ4VC39 106 aa7.06□□□□□ -1.28
NPIPB3-202ENST00000448012 SDIM1Q6ZPB5 146 aa7.06□□□□□ -1.28
NPIPB3-202ENST00000448012 NUP35Q8NFH5 326 aa7.06□□□□□ -1.28
NPIPB3-202ENST00000448012 RNF185Q96GF1 192 aa7.06□□□□□ -1.28
NPIPB3-202ENST00000448012 MRPL18Q9H0U6 180 aaKnown RBP7.06□□□□□ -1.28
NPIPB3-202ENST00000448012 DMBT1Q9UGM3 2413 aaPredicted RBP7.05□□□□□ -1.28
NPIPB3-202ENST00000448012 TRBV27A0A0K0K1C4 114 aa7.05□□□□□ -1.28
NPIPB3-202ENST00000448012 TCAPO15273 167 aa7.05□□□□□ -1.28
NPIPB3-202ENST00000448012 TSHBP01222 138 aa7.05□□□□□ -1.28
NPIPB3-202ENST00000448012 TMEM136Q6ZRR5 245 aa7.05□□□□□ -1.28
NPIPB3-202ENST00000448012 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.05□□□□□ -1.28
NPIPB3-202ENST00000448012 IGHV1-58A0A0C4DH39 117 aa7.04□□□□□ -1.28
NPIPB3-202ENST00000448012 LINC00959A0A1B0GUT2 108 aa7.04□□□□□ -1.28
NPIPB3-202ENST00000448012 A0A1B0GXF2 115 aa7.04□□□□□ -1.28
NPIPB3-202ENST00000448012 KRTAP29-1A8MX34 341 aaPredicted RBP7.04□□□□□ -1.28
NPIPB3-202ENST00000448012 CCL25O15444 150 aa7.04□□□□□ -1.28
NPIPB3-202ENST00000448012 ESDP10768 282 aa7.04□□□□□ -1.28
NPIPB3-202ENST00000448012 CAMPP49913 170 aa7.04□□□□□ -1.28
NPIPB3-202ENST00000448012 AKR1D1P51857 326 aa7.04□□□□□ -1.28
NPIPB3-202ENST00000448012 POLR2KP53803 58 aaKnown RBP7.04□□□□□ -1.28
NPIPB3-202ENST00000448012 SUMO2P61956 95 aaKnown RBP7.04□□□□□ -1.28
NPIPB3-202ENST00000448012 HBBP68871 147 aa7.04□□□□□ -1.28
NPIPB3-202ENST00000448012 COA6Q5JTJ3 125 aaKnown RBP7.04□□□□□ -1.28
NPIPB3-202ENST00000448012 ZNF664Q8N3J9 261 aa7.04□□□□□ -1.28
NPIPB3-202ENST00000448012 C7orf33Q8WU49 177 aa7.04□□□□□ -1.28
NPIPB3-202ENST00000448012 ZNF561-AS1K7EIQ3 104 aa7.03□□□□□ -1.28
NPIPB3-202ENST00000448012 OXTP01178 125 aa7.03□□□□□ -1.28
NPIPB3-202ENST00000448012 MALP21145 153 aa7.03□□□□□ -1.28
NPIPB3-202ENST00000448012 CKS2P33552 79 aa7.03□□□□□ -1.28
NPIPB3-202ENST00000448012 MRPL52Q86TS9 123 aaKnown RBP7.03□□□□□ -1.28
NPIPB3-202ENST00000448012 C15orf56Q8N910 161 aa7.03□□□□□ -1.28
NPIPB3-202ENST00000448012 GVQW2A0A096LPI5 108 aaPredicted RBP7.02□□□□□ -1.29
NPIPB3-202ENST00000448012 SMKR1H3BMG3 65 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms