RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 ZNF25P17030 456 aaPredicted RBP11.33□□□□□ -0.6
GTF3A-204ENST00000438571 CEBPGP53567 150 aa11.33□□□□□ -0.6
GTF3A-204ENST00000438571 A8MWL6 223 aa11.32□□□□□ -0.6
GTF3A-204ENST00000438571 IGHV1-58A0A0C4DH39 117 aa11.31□□□□□ -0.6
GTF3A-204ENST00000438571 TMEM250H0YL14 139 aa11.31□□□□□ -0.6
GTF3A-204ENST00000438571 BTF3L4Q96K17 158 aa11.31□□□□□ -0.6
GTF3A-204ENST00000438571 CARD19Q96LW7 228 aa11.31□□□□□ -0.6
GTF3A-204ENST00000438571 LINC01600Q96MT4 127 aa11.31□□□□□ -0.6
GTF3A-204ENST00000438571 SMKR1H3BMG3 65 aa11.3□□□□□ -0.6
GTF3A-204ENST00000438571 AMN1Q8IY45 258 aa11.3□□□□□ -0.6
GTF3A-204ENST00000438571 MRAP2Q96G30 205 aa11.3□□□□□ -0.6
GTF3A-204ENST00000438571 TMEM101Q96IK0 257 aa11.3□□□□□ -0.6
GTF3A-204ENST00000438571 ST20Q9HBF5 79 aa11.3□□□□□ -0.6
GTF3A-204ENST00000438571 CDC42SE2Q9NRR3 84 aa11.3□□□□□ -0.6
GTF3A-204ENST00000438571 POLR2KP53803 58 aaKnown RBP11.29□□□□□ -0.6
GTF3A-204ENST00000438571 CT83Q5H943 113 aa11.29□□□□□ -0.6
GTF3A-204ENST00000438571 HIGD1CA8MV81 97 aa11.28□□□□□ -0.6
GTF3A-204ENST00000438571 RAB4AP20338 218 aa11.28□□□□□ -0.6
GTF3A-204ENST00000438571 TMEM191AQ9H0A3 160 aa11.28□□□□□ -0.6
GTF3A-204ENST00000438571 RNASE13Q5GAN3 156 aaKnown RBP11.27□□□□□ -0.61
GTF3A-204ENST00000438571 MRPL52Q86TS9 123 aaKnown RBP11.27□□□□□ -0.61
GTF3A-204ENST00000438571 LINC01551Q86U37 167 aa11.27□□□□□ -0.61
GTF3A-204ENST00000438571 TRBV27A0A0K0K1C4 114 aa11.26□□□□□ -0.61
GTF3A-204ENST00000438571 A0A1B0GUT8 65 aa11.26□□□□□ -0.61
GTF3A-204ENST00000438571 C7orf77A4D0Y5 90 aa11.26□□□□□ -0.61
GTF3A-204ENST00000438571 SYCNQ0VAF6 134 aa11.26□□□□□ -0.61
GTF3A-204ENST00000438571 SS18Q15532 418 aa11.26□□□□□ -0.61
GTF3A-204ENST00000438571 CD164L2Q6UWJ8 174 aa11.26□□□□□ -0.61
GTF3A-204ENST00000438571 TSKUQ8WUA8 353 aa11.26□□□□□ -0.61
GTF3A-204ENST00000438571 BORCS7Q96B45 105 aa11.26□□□□□ -0.61
GTF3A-204ENST00000438571 A0A0J9YXV3 536 aa11.25□□□□□ -0.61
GTF3A-204ENST00000438571 CAMPP49913 170 aa11.25□□□□□ -0.61
GTF3A-204ENST00000438571 BLOC1S1P78537 153 aa11.25□□□□□ -0.61
GTF3A-204ENST00000438571 ZNF664Q8N3J9 261 aa11.25□□□□□ -0.61
GTF3A-204ENST00000438571 SMIM7Q9BQ49 75 aa11.25□□□□□ -0.61
GTF3A-204ENST00000438571 IGLV4-69A0A075B6H9 119 aa11.24□□□□□ -0.61
GTF3A-204ENST00000438571 ZNF561-AS1K7EIQ3 104 aa11.24□□□□□ -0.61
GTF3A-204ENST00000438571 PTTG1IPP53801 180 aa11.24□□□□□ -0.61
GTF3A-204ENST00000438571 KRTAP10-8P60410 259 aa11.23□□□□□ -0.61
GTF3A-204ENST00000438571 GAGE2BQ13066 116 aa11.23□□□□□ -0.61
GTF3A-204ENST00000438571 SRSF9Q13242 221 aaKnown RBP eCLIP11.23□□□□□ -0.61
GTF3A-204ENST00000438571 SPINK6Q6UWN8 80 aa11.23□□□□□ -0.61
GTF3A-204ENST00000438571 NRACQ8N912 160 aa11.23□□□□□ -0.61
GTF3A-204ENST00000438571 LINC00474Q9P2X8 69 aa11.23□□□□□ -0.61
GTF3A-204ENST00000438571 UBE2D4Q9Y2X8 147 aa11.23□□□□□ -0.61
GTF3A-204ENST00000438571 V9GYV3 84 aa11.23□□□□□ -0.61
GTF3A-204ENST00000438571 A0A1W2PNN7 141 aa11.22□□□□□ -0.61
GTF3A-204ENST00000438571 Q6ZUT4 128 aa11.22□□□□□ -0.61
GTF3A-204ENST00000438571 OSTCQ9NRP0 149 aa11.22□□□□□ -0.61
GTF3A-204ENST00000438571 ZNF727A8MUV8 499 aa11.21□□□□□ -0.61
GTF3A-204ENST00000438571 SRP19P09132 144 aaKnown RBP11.21□□□□□ -0.61
GTF3A-204ENST00000438571 NUP35Q8NFH5 326 aa11.21□□□□□ -0.61
GTF3A-204ENST00000438571 EIF5A2Q9GZV4 153 aaKnown RBP11.21□□□□□ -0.61
GTF3A-204ENST00000438571 Q6ZRP5 223 aa11.2□□□□□ -0.62
GTF3A-204ENST00000438571 FAM210AQ96ND0 272 aa11.2□□□□□ -0.62
GTF3A-204ENST00000438571 LPAP08519 4548 aa11.19□□□□□ -0.62
GTF3A-204ENST00000438571 TRAV13-1A0A0B4J241 112 aa11.19□□□□□ -0.62
GTF3A-204ENST00000438571 LOC107984640A0A0U1RRK4 108 aa11.19□□□□□ -0.62
GTF3A-204ENST00000438571 LCE2BO14633 110 aa11.19□□□□□ -0.62
GTF3A-204ENST00000438571 FCER1GP30273 86 aa11.19□□□□□ -0.62
GTF3A-204ENST00000438571 SUMO2P61956 95 aaKnown RBP11.19□□□□□ -0.62
GTF3A-204ENST00000438571 CLLU1Q5K131 121 aa11.19□□□□□ -0.62
GTF3A-204ENST00000438571 C5orf38Q86SI9 138 aa11.19□□□□□ -0.62
GTF3A-204ENST00000438571 PKIGQ9Y2B9 76 aa11.19□□□□□ -0.62
GTF3A-204ENST00000438571 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.18□□□□□ -0.62
GTF3A-204ENST00000438571 COX7A2LO14548 114 aa11.18□□□□□ -0.62
GTF3A-204ENST00000438571 VCYO14598 125 aa11.18□□□□□ -0.62
GTF3A-204ENST00000438571 MALP21145 153 aa11.18□□□□□ -0.62
GTF3A-204ENST00000438571 RAB14P61106 215 aa11.18□□□□□ -0.62
GTF3A-204ENST00000438571 REG3GQ6UW15 175 aa11.18□□□□□ -0.62
GTF3A-204ENST00000438571 CAMK2N2Q96S95 79 aa11.18□□□□□ -0.62
GTF3A-204ENST00000438571 C1orf196B1AJZ1 125 aa11.17□□□□□ -0.62
GTF3A-204ENST00000438571 RIGQ13278 110 aa11.17□□□□□ -0.62
GTF3A-204ENST00000438571 MRPL51Q4U2R6 128 aaKnown RBP11.17□□□□□ -0.62
GTF3A-204ENST00000438571 ISOC2Q96AB3 205 aa11.17□□□□□ -0.62
GTF3A-204ENST00000438571 C9orf116Q5BN46 136 aaPredicted RBP11.16□□□□□ -0.62
GTF3A-204ENST00000438571 FAM104AQ969W3 186 aa11.16□□□□□ -0.62
GTF3A-204ENST00000438571 OPRPNQ99935 248 aaPredicted RBP11.16□□□□□ -0.62
GTF3A-204ENST00000438571 CSDC2Q9Y534 153 aaKnown RBP11.16□□□□□ -0.62
GTF3A-204ENST00000438571 APOMO95445 188 aa11.15□□□□□ -0.62
GTF3A-204ENST00000438571 RPL23P62829 140 aaKnown RBP11.15□□□□□ -0.62
GTF3A-204ENST00000438571 RPL39P62891 51 aaKnown RBP11.15□□□□□ -0.62
GTF3A-204ENST00000438571 RPL18AQ02543 176 aaKnown RBP11.15□□□□□ -0.62
GTF3A-204ENST00000438571 SPAG11BQ08648 103 aa11.15□□□□□ -0.62
GTF3A-204ENST00000438571 PHF5AQ7RTV0 110 aaKnown RBP11.15□□□□□ -0.62
GTF3A-204ENST00000438571 PSORS1C2Q9UIG4 136 aa11.15□□□□□ -0.62
GTF3A-204ENST00000438571 C9JQL5 133 aa11.14□□□□□ -0.63
GTF3A-204ENST00000438571 SRSF3P84103 164 aaKnown RBP11.14□□□□□ -0.63
GTF3A-204ENST00000438571 FAM104BQ5XKR9 115 aa11.14□□□□□ -0.63
GTF3A-204ENST00000438571 KIR2DL4Q99706 377 aa11.14□□□□□ -0.63
GTF3A-204ENST00000438571 C2orf48Q96LS8 159 aa11.13□□□□□ -0.63
GTF3A-204ENST00000438571 NAT8BQ9UHF3 227 aa11.13□□□□□ -0.63
GTF3A-204ENST00000438571 ADIRFQ15847 76 aa11.12□□□□□ -0.63
GTF3A-204ENST00000438571 PPP1R2P9O14990 202 aa11.11□□□□□ -0.63
GTF3A-204ENST00000438571 FAM74A3Q4VXF1 159 aa11.11□□□□□ -0.63
GTF3A-204ENST00000438571 KRTAP11-1Q8IUC1 163 aa11.11□□□□□ -0.63
GTF3A-204ENST00000438571 TIMM21Q9BVV7 248 aa11.11□□□□□ -0.63
GTF3A-204ENST00000438571 SMIM27A0A1W2PRY6 76 aa11.1□□□□□ -0.63
GTF3A-204ENST00000438571 PPP1R17O96001 155 aa11.1□□□□□ -0.63
GTF3A-204ENST00000438571 TMEM241Q24JQ0 296 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms