RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 GATD1Q8NB37 220 aa4.93□□□□□ -1.62
VPS50-203ENST00000436177 NUDT10Q8NFP7 164 aa4.93□□□□□ -1.62
VPS50-203ENST00000436177 OR5A1Q8NGJ0 315 aa4.93□□□□□ -1.62
VPS50-203ENST00000436177 NUDT11Q96G61 164 aa4.93□□□□□ -1.62
VPS50-203ENST00000436177 CNFNQ9BYD5 112 aa4.93□□□□□ -1.62
VPS50-203ENST00000436177 RNASE7Q9H1E1 156 aaKnown RBP4.93□□□□□ -1.62
VPS50-203ENST00000436177 PLAC8Q9NZF1 115 aa4.93□□□□□ -1.62
VPS50-203ENST00000436177 GVQW2A0A096LPI5 108 aaPredicted RBP4.92□□□□□ -1.62
VPS50-203ENST00000436177 A8MWL6 223 aa4.92□□□□□ -1.62
VPS50-203ENST00000436177 XCL1P47992 114 aa4.92□□□□□ -1.62
VPS50-203ENST00000436177 CEBPGP53567 150 aa4.92□□□□□ -1.62
VPS50-203ENST00000436177 Q6ZNX1 250 aa4.92□□□□□ -1.62
VPS50-203ENST00000436177 SLC51BQ86UW2 128 aa4.92□□□□□ -1.62
VPS50-203ENST00000436177 STPG4Q8N801 248 aa4.92□□□□□ -1.62
VPS50-203ENST00000436177 RPL39LQ96EH5 51 aaKnown RBP4.92□□□□□ -1.62
VPS50-203ENST00000436177 MRAP2Q96G30 205 aa4.92□□□□□ -1.62
VPS50-203ENST00000436177 FAT3Q8TDW7 4589 aa4.92□□□□□ -1.62
VPS50-203ENST00000436177 I3L3M4 83 aa4.91□□□□□ -1.62
VPS50-203ENST00000436177 GATCO43716 136 aaKnown RBP4.91□□□□□ -1.62
VPS50-203ENST00000436177 SMAGPQ0VAQ4 97 aa4.91□□□□□ -1.62
VPS50-203ENST00000436177 PRSS3P2Q8NHM4 247 aa4.91□□□□□ -1.62
VPS50-203ENST00000436177 LYPD6BQ8NI32 183 aa4.91□□□□□ -1.62
VPS50-203ENST00000436177 CARD19Q96LW7 228 aa4.91□□□□□ -1.62
VPS50-203ENST00000436177 ST20Q9HBF5 79 aa4.91□□□□□ -1.62
VPS50-203ENST00000436177 IGHV1-58A0A0C4DH39 117 aa4.9□□□□□ -1.63
VPS50-203ENST00000436177 ZNF561-AS1K7EIQ3 104 aa4.9□□□□□ -1.63
VPS50-203ENST00000436177 CCL25O15444 150 aa4.9□□□□□ -1.63
VPS50-203ENST00000436177 MALP21145 153 aa4.9□□□□□ -1.63
VPS50-203ENST00000436177 FCER1GP30273 86 aa4.9□□□□□ -1.63
VPS50-203ENST00000436177 PRR3P79522 188 aaKnown RBP4.9□□□□□ -1.63
VPS50-203ENST00000436177 SS18Q15532 418 aa4.9□□□□□ -1.63
VPS50-203ENST00000436177 REG3GQ6UW15 175 aa4.9□□□□□ -1.63
VPS50-203ENST00000436177 OCC1Q8TAD7 63 aa4.9□□□□□ -1.63
VPS50-203ENST00000436177 A0A096LNI7 61 aa4.89□□□□□ -1.63
VPS50-203ENST00000436177 TMEM250H0YL14 139 aa4.89□□□□□ -1.63
VPS50-203ENST00000436177 K7EN84 100 aa4.89□□□□□ -1.63
VPS50-203ENST00000436177 MT1HL1P0DM35 61 aa4.89□□□□□ -1.63
VPS50-203ENST00000436177 BLOC1S1P78537 153 aa4.89□□□□□ -1.63
VPS50-203ENST00000436177 FOXI1Q12951 378 aa4.89□□□□□ -1.63
VPS50-203ENST00000436177 ANKRD39Q53RE8 183 aa4.89□□□□□ -1.63
VPS50-203ENST00000436177 CT83Q5H943 113 aa4.89□□□□□ -1.63
VPS50-203ENST00000436177 TCTE3Q8IZS6 198 aa4.89□□□□□ -1.63
VPS50-203ENST00000436177 ISOC2Q96AB3 205 aa4.89□□□□□ -1.63
VPS50-203ENST00000436177 FAM210AQ96ND0 272 aa4.89□□□□□ -1.63
VPS50-203ENST00000436177 TMEM242Q9NWH2 141 aa4.89□□□□□ -1.63
VPS50-203ENST00000436177 TRBV6-5A0A0K0K1A5 114 aa4.88□□□□□ -1.63
VPS50-203ENST00000436177 LINC00959A0A1B0GUT2 108 aa4.88□□□□□ -1.63
VPS50-203ENST00000436177 A0A1B0GUT8 65 aa4.88□□□□□ -1.63
VPS50-203ENST00000436177 C7orf77A4D0Y5 90 aa4.88□□□□□ -1.63
VPS50-203ENST00000436177 FOXA3P55318 350 aaPredicted RBP4.88□□□□□ -1.63
VPS50-203ENST00000436177 SYCNQ0VAF6 134 aa4.88□□□□□ -1.63
VPS50-203ENST00000436177 SMIM7Q9BQ49 75 aa4.88□□□□□ -1.63
VPS50-203ENST00000436177 HIGD1CA8MV81 97 aa4.87□□□□□ -1.63
VPS50-203ENST00000436177 COX7A2LO14548 114 aa4.87□□□□□ -1.63
VPS50-203ENST00000436177 PPP1R17O96001 155 aa4.87□□□□□ -1.63
VPS50-203ENST00000436177 TSHBP01222 138 aa4.87□□□□□ -1.63
VPS50-203ENST00000436177 CAMPP49913 170 aa4.87□□□□□ -1.63
VPS50-203ENST00000436177 CD164L2Q6UWJ8 174 aa4.87□□□□□ -1.63
VPS50-203ENST00000436177 FAM231DQ6ZW35 169 aa4.87□□□□□ -1.63
VPS50-203ENST00000436177 LINC00526Q96FQ7 95 aa4.87□□□□□ -1.63
VPS50-203ENST00000436177 EIF5A2Q9GZV4 153 aaKnown RBP4.87□□□□□ -1.63
VPS50-203ENST00000436177 LOC107984640A0A0U1RRK4 108 aa4.86□□□□□ -1.63
VPS50-203ENST00000436177 C1orf196B1AJZ1 125 aa4.86□□□□□ -1.63
VPS50-203ENST00000436177 GAGE2BQ13066 116 aa4.86□□□□□ -1.63
VPS50-203ENST00000436177 RIGQ13278 110 aa4.86□□□□□ -1.63
VPS50-203ENST00000436177 SPINK6Q6UWN8 80 aa4.86□□□□□ -1.63
VPS50-203ENST00000436177 ALKAL2Q6UX46 152 aa4.86□□□□□ -1.63
VPS50-203ENST00000436177 Q6ZRP5 223 aa4.86□□□□□ -1.63
VPS50-203ENST00000436177 MRPL52Q86TS9 123 aaKnown RBP4.86□□□□□ -1.63
VPS50-203ENST00000436177 AKAP14Q86UN6 197 aa4.86□□□□□ -1.63
VPS50-203ENST00000436177 ZNF664Q8N3J9 261 aa4.86□□□□□ -1.63
VPS50-203ENST00000436177 TSKUQ8WUA8 353 aa4.86□□□□□ -1.63
VPS50-203ENST00000436177 TMEM18Q96B42 140 aa4.86□□□□□ -1.63
VPS50-203ENST00000436177 LINC01600Q96MT4 127 aa4.86□□□□□ -1.63
VPS50-203ENST00000436177 KIR2DL4Q99706 377 aa4.86□□□□□ -1.63
VPS50-203ENST00000436177 TMEM191AQ9H0A3 160 aa4.86□□□□□ -1.63
VPS50-203ENST00000436177 PKHD1L1Q86WI1 4243 aa4.86□□□□□ -1.63
VPS50-203ENST00000436177 TRAV13-1A0A0B4J241 112 aa4.85□□□□□ -1.63
VPS50-203ENST00000436177 TRBV27A0A0K0K1C4 114 aa4.85□□□□□ -1.63
VPS50-203ENST00000436177 FAM231BA6NCW3 169 aa4.85□□□□□ -1.63
VPS50-203ENST00000436177 ZNF727A8MUV8 499 aa4.85□□□□□ -1.63
VPS50-203ENST00000436177 VCYO14598 125 aa4.85□□□□□ -1.63
VPS50-203ENST00000436177 APOMO95445 188 aa4.85□□□□□ -1.63
VPS50-203ENST00000436177 MT-ND6P03923 174 aa4.85□□□□□ -1.63
VPS50-203ENST00000436177 ESDP10768 282 aa4.85□□□□□ -1.63
VPS50-203ENST00000436177 RPL18AQ02543 176 aaKnown RBP4.85□□□□□ -1.63
VPS50-203ENST00000436177 CAMK2N2Q96S95 79 aa4.85□□□□□ -1.63
VPS50-203ENST00000436177 CDC42SE2Q9NRR3 84 aa4.85□□□□□ -1.63
VPS50-203ENST00000436177 IGLV4-69A0A075B6H9 119 aa4.84□□□□□ -1.63
VPS50-203ENST00000436177 A0A0J9YXV3 536 aa4.84□□□□□ -1.63
VPS50-203ENST00000436177 PPP1R2P9O14990 202 aa4.84□□□□□ -1.63
VPS50-203ENST00000436177 PTTG1IPP53801 180 aa4.84□□□□□ -1.63
VPS50-203ENST00000436177 SUMO2P61956 95 aaKnown RBP4.84□□□□□ -1.63
VPS50-203ENST00000436177 AMN1Q8IY45 258 aa4.84□□□□□ -1.63
VPS50-203ENST00000436177 LRP2P98164 4655 aa4.84□□□□□ -1.63
VPS50-203ENST00000436177 SMKR1H3BMG3 65 aa4.83□□□□□ -1.64
VPS50-203ENST00000436177 TCAPO15273 167 aa4.83□□□□□ -1.64
VPS50-203ENST00000436177 RAB4AP20338 218 aa4.83□□□□□ -1.64
VPS50-203ENST00000436177 POLR2KP53803 58 aaKnown RBP4.83□□□□□ -1.64
VPS50-203ENST00000436177 SPAG11BQ08648 103 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms