RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 ZNF25P17030 456 aaPredicted RBP6.5□□□□□ -1.37
CPNE1-214ENST00000435747 RPL23P62829 140 aaKnown RBP6.5□□□□□ -1.37
CPNE1-214ENST00000435747 SRSF3P84103 164 aaKnown RBP6.5□□□□□ -1.37
CPNE1-214ENST00000435747 FOXI1Q12951 378 aa6.5□□□□□ -1.37
CPNE1-214ENST00000435747 SMIM15Q7Z3B0 74 aa6.5□□□□□ -1.37
CPNE1-214ENST00000435747 MRPL52Q86TS9 123 aaKnown RBP6.5□□□□□ -1.37
CPNE1-214ENST00000435747 AMN1Q8IY45 258 aa6.5□□□□□ -1.37
CPNE1-214ENST00000435747 NRACQ8N912 160 aa6.5□□□□□ -1.37
CPNE1-214ENST00000435747 NUP35Q8NFH5 326 aa6.5□□□□□ -1.37
CPNE1-214ENST00000435747 SPACA4Q8TDM5 124 aa6.5□□□□□ -1.37
CPNE1-214ENST00000435747 C7orf33Q8WU49 177 aa6.5□□□□□ -1.37
CPNE1-214ENST00000435747 CHCHD10Q8WYQ3 142 aaPredicted RBP6.5□□□□□ -1.37
CPNE1-214ENST00000435747 DPH3Q96FX2 82 aa6.5□□□□□ -1.37
CPNE1-214ENST00000435747 GVQW2A0A096LPI5 108 aaPredicted RBP6.49□□□□□ -1.37
CPNE1-214ENST00000435747 CHTF8P0CG12 524 aa6.49□□□□□ -1.37
CPNE1-214ENST00000435747 OR5A1Q8NGJ0 315 aa6.49□□□□□ -1.37
CPNE1-214ENST00000435747 MRAP2Q96G30 205 aa6.49□□□□□ -1.37
CPNE1-214ENST00000435747 ST20Q9HBF5 79 aa6.49□□□□□ -1.37
CPNE1-214ENST00000435747 TMEM242Q9NWH2 141 aa6.49□□□□□ -1.37
CPNE1-214ENST00000435747 IGHV3-64A0A075B6Q5 118 aa6.48□□□□□ -1.37
CPNE1-214ENST00000435747 A0A087WYN8 130 aa6.48□□□□□ -1.37
CPNE1-214ENST00000435747 SMIM27A0A1W2PRY6 76 aa6.48□□□□□ -1.37
CPNE1-214ENST00000435747 TMEM241Q24JQ0 296 aa6.48□□□□□ -1.37
CPNE1-214ENST00000435747 FAM74A3Q4VXF1 159 aa6.48□□□□□ -1.37
CPNE1-214ENST00000435747 AMMECR1LQ6DCA0 310 aa6.48□□□□□ -1.37
CPNE1-214ENST00000435747 RNASEKQ6P5S7 137 aaKnown RBP6.48□□□□□ -1.37
CPNE1-214ENST00000435747 CDC42SE2Q9NRR3 84 aa6.48□□□□□ -1.37
CPNE1-214ENST00000435747 IGKV3OR2-268A0A0C4DH90 116 aa6.47□□□□□ -1.37
CPNE1-214ENST00000435747 LINC00959A0A1B0GUT2 108 aa6.47□□□□□ -1.37
CPNE1-214ENST00000435747 SMKR1H3BMG3 65 aa6.47□□□□□ -1.37
CPNE1-214ENST00000435747 PMCHP20382 165 aa6.47□□□□□ -1.37
CPNE1-214ENST00000435747 PRR3P79522 188 aaKnown RBP6.47□□□□□ -1.37
CPNE1-214ENST00000435747 SPINK6Q6UWN8 80 aa6.47□□□□□ -1.37
CPNE1-214ENST00000435747 FAM104AQ969W3 186 aa6.47□□□□□ -1.37
CPNE1-214ENST00000435747 PLAC8Q9NZF1 115 aa6.47□□□□□ -1.37
CPNE1-214ENST00000435747 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.46□□□□□ -1.38
CPNE1-214ENST00000435747 HIGD2BQ4VC39 106 aa6.46□□□□□ -1.38
CPNE1-214ENST00000435747 FAM104BQ5XKR9 115 aa6.46□□□□□ -1.38
CPNE1-214ENST00000435747 CFAP161Q6P656 301 aa6.46□□□□□ -1.38
CPNE1-214ENST00000435747 PRSS3P2Q8NHM4 247 aa6.46□□□□□ -1.38
CPNE1-214ENST00000435747 BORCS7Q96B45 105 aa6.46□□□□□ -1.38
CPNE1-214ENST00000435747 AP5S1Q9NUS5 200 aa6.46□□□□□ -1.38
CPNE1-214ENST00000435747 NAT8Q9UHE5 227 aa6.46□□□□□ -1.38
CPNE1-214ENST00000435747 NAT8BQ9UHF3 227 aa6.46□□□□□ -1.38
CPNE1-214ENST00000435747 CSDC2Q9Y534 153 aaKnown RBP6.46□□□□□ -1.38
CPNE1-214ENST00000435747 TRBV24-1A0A075B6N3 115 aa6.45□□□□□ -1.38
CPNE1-214ENST00000435747 C7orf77A4D0Y5 90 aa6.45□□□□□ -1.38
CPNE1-214ENST00000435747 CCL25O15444 150 aa6.45□□□□□ -1.38
CPNE1-214ENST00000435747 SUMO2P61956 95 aaKnown RBP6.45□□□□□ -1.38
CPNE1-214ENST00000435747 COX6A2Q02221 97 aa6.45□□□□□ -1.38
CPNE1-214ENST00000435747 RIGQ13278 110 aa6.45□□□□□ -1.38
CPNE1-214ENST00000435747 PRR4Q16378 134 aa6.45□□□□□ -1.38
CPNE1-214ENST00000435747 MRPL51Q4U2R6 128 aaKnown RBP6.45□□□□□ -1.38
CPNE1-214ENST00000435747 SMDT1Q9H4I9 107 aa6.45□□□□□ -1.38
CPNE1-214ENST00000435747 UBE2D4Q9Y2X8 147 aa6.45□□□□□ -1.38
CPNE1-214ENST00000435747 A0A1B0GXF2 115 aa6.44□□□□□ -1.38
CPNE1-214ENST00000435747 VCYO14598 125 aa6.44□□□□□ -1.38
CPNE1-214ENST00000435747 XCL1P47992 114 aa6.44□□□□□ -1.38
CPNE1-214ENST00000435747 RPL32P62910 135 aaKnown RBP6.44□□□□□ -1.38
CPNE1-214ENST00000435747 ADIRFQ15847 76 aa6.44□□□□□ -1.38
CPNE1-214ENST00000435747 CD164L2Q6UWJ8 174 aa6.44□□□□□ -1.38
CPNE1-214ENST00000435747 ZNF664Q8N3J9 261 aa6.44□□□□□ -1.38
CPNE1-214ENST00000435747 A0A096LNI7 61 aa6.43□□□□□ -1.38
CPNE1-214ENST00000435747 PPP1R17O96001 155 aa6.43□□□□□ -1.38
CPNE1-214ENST00000435747 TMEM101Q96IK0 257 aa6.43□□□□□ -1.38
CPNE1-214ENST00000435747 BTF3L4Q96K17 158 aa6.43□□□□□ -1.38
CPNE1-214ENST00000435747 IGHV1-58A0A0C4DH39 117 aa6.42□□□□□ -1.38
CPNE1-214ENST00000435747 A0A1B0GW15 77 aa6.42□□□□□ -1.38
CPNE1-214ENST00000435747 LINC00862A6NCI5 91 aa6.42□□□□□ -1.38
CPNE1-214ENST00000435747 PEA15Q15121 130 aa6.42□□□□□ -1.38
CPNE1-214ENST00000435747 LINC00526Q96FQ7 95 aa6.42□□□□□ -1.38
CPNE1-214ENST00000435747 C20orf78Q9BR46 151 aa6.42□□□□□ -1.38
CPNE1-214ENST00000435747 TIMM21Q9BVV7 248 aa6.42□□□□□ -1.38
CPNE1-214ENST00000435747 MUC17Q685J3 4493 aa6.42□□□□□ -1.38
CPNE1-214ENST00000435747 PPP1R2P9O14990 202 aa6.41□□□□□ -1.38
CPNE1-214ENST00000435747 CAMPP49913 170 aa6.41□□□□□ -1.38
CPNE1-214ENST00000435747 KRTAP9-7A8MTY7 169 aa6.4□□□□□ -1.38
CPNE1-214ENST00000435747 TNFRSF6BO95407 300 aa6.4□□□□□ -1.38
CPNE1-214ENST00000435747 NPYP01303 97 aa6.4□□□□□ -1.38
CPNE1-214ENST00000435747 SS18Q15532 418 aa6.4□□□□□ -1.38
CPNE1-214ENST00000435747 RNASE13Q5GAN3 156 aaKnown RBP6.4□□□□□ -1.38
CPNE1-214ENST00000435747 Q6ZUT4 128 aa6.4□□□□□ -1.38
CPNE1-214ENST00000435747 KIR2DL4Q99706 377 aa6.4□□□□□ -1.38
CPNE1-214ENST00000435747 IGKV2-24A0A0C4DH68 120 aa6.39□□□□□ -1.39
CPNE1-214ENST00000435747 C1orf196B1AJZ1 125 aa6.39□□□□□ -1.39
CPNE1-214ENST00000435747 D6R8Y8 96 aa6.39□□□□□ -1.39
CPNE1-214ENST00000435747 FCER1GP30273 86 aa6.39□□□□□ -1.39
CPNE1-214ENST00000435747 RPL39P62891 51 aaKnown RBP6.39□□□□□ -1.39
CPNE1-214ENST00000435747 HBBP68871 147 aa6.39□□□□□ -1.39
CPNE1-214ENST00000435747 MAJINQ3KP22 176 aa6.39□□□□□ -1.39
CPNE1-214ENST00000435747 MRPL54Q6P161 138 aaKnown RBP6.39□□□□□ -1.39
CPNE1-214ENST00000435747 STPG4Q8N801 248 aa6.39□□□□□ -1.39
CPNE1-214ENST00000435747 CARD19Q96LW7 228 aa6.39□□□□□ -1.39
CPNE1-214ENST00000435747 SMIM2Q9BVW6 85 aa6.39□□□□□ -1.39
CPNE1-214ENST00000435747 IGLV4-69A0A075B6H9 119 aa6.38□□□□□ -1.39
CPNE1-214ENST00000435747 CKS2P33552 79 aa6.38□□□□□ -1.39
CPNE1-214ENST00000435747 SYCNQ0VAF6 134 aa6.38□□□□□ -1.39
CPNE1-214ENST00000435747 SRSF9Q13242 221 aaKnown RBP eCLIP6.38□□□□□ -1.39
CPNE1-214ENST00000435747 IGHV3OR16-9A0A0B4J2B5 98 aa6.37□□□□□ -1.39
CPNE1-214ENST00000435747 PRSS47A8MTI9 375 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms