RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ESDP10768 282 aa10.28□□□□□ -0.76
VARS-216ENST00000428445 BORCS7Q96B45 105 aa10.28□□□□□ -0.76
VARS-216ENST00000428445 IGHV1-58A0A0C4DH39 117 aa10.27□□□□□ -0.77
VARS-216ENST00000428445 LINC00959A0A1B0GUT2 108 aa10.27□□□□□ -0.77
VARS-216ENST00000428445 CCL25O15444 150 aa10.27□□□□□ -0.77
VARS-216ENST00000428445 MRPL52Q86TS9 123 aaKnown RBP10.27□□□□□ -0.77
VARS-216ENST00000428445 ST20Q9HBF5 79 aa10.27□□□□□ -0.77
VARS-216ENST00000428445 LPAP08519 4548 aa10.27□□□□□ -0.77
VARS-216ENST00000428445 POLR2KP53803 58 aaKnown RBP10.26□□□□□ -0.77
VARS-216ENST00000428445 SRSF9Q13242 221 aaKnown RBP eCLIP10.26□□□□□ -0.77
VARS-216ENST00000428445 SS18Q15532 418 aa10.26□□□□□ -0.77
VARS-216ENST00000428445 MRAP2Q96G30 205 aa10.26□□□□□ -0.77
VARS-216ENST00000428445 TMEM191AQ9H0A3 160 aa10.26□□□□□ -0.77
VARS-216ENST00000428445 TRBV27A0A0K0K1C4 114 aa10.25□□□□□ -0.77
VARS-216ENST00000428445 SMAGPQ0VAQ4 97 aa10.25□□□□□ -0.77
VARS-216ENST00000428445 CD164L2Q6UWJ8 174 aa10.25□□□□□ -0.77
VARS-216ENST00000428445 SPINK6Q6UWN8 80 aa10.25□□□□□ -0.77
VARS-216ENST00000428445 CDC42SE2Q9NRR3 84 aa10.25□□□□□ -0.77
VARS-216ENST00000428445 A0A1B0GUT8 65 aa10.24□□□□□ -0.77
VARS-216ENST00000428445 PPP1R17O96001 155 aa10.24□□□□□ -0.77
VARS-216ENST00000428445 TSKUQ8WUA8 353 aa10.24□□□□□ -0.77
VARS-216ENST00000428445 CARD19Q96LW7 228 aa10.24□□□□□ -0.77
VARS-216ENST00000428445 ZNF561-AS1K7EIQ3 104 aa10.23□□□□□ -0.77
VARS-216ENST00000428445 TSHBP01222 138 aa10.23□□□□□ -0.77
VARS-216ENST00000428445 ZNF664Q8N3J9 261 aa10.23□□□□□ -0.77
VARS-216ENST00000428445 CSDC2Q9Y534 153 aaKnown RBP10.23□□□□□ -0.77
VARS-216ENST00000428445 VCYO14598 125 aa10.22□□□□□ -0.77
VARS-216ENST00000428445 RAB4AP20338 218 aa10.22□□□□□ -0.77
VARS-216ENST00000428445 GAGE2BQ13066 116 aa10.22□□□□□ -0.77
VARS-216ENST00000428445 REG3GQ6UW15 175 aa10.22□□□□□ -0.77
VARS-216ENST00000428445 ISOC2Q96AB3 205 aa10.22□□□□□ -0.77
VARS-216ENST00000428445 OSTCQ9NRP0 149 aa10.22□□□□□ -0.77
VARS-216ENST00000428445 TMEM242Q9NWH2 141 aa10.22□□□□□ -0.77
VARS-216ENST00000428445 A0A1W2PNN7 141 aa10.21□□□□□ -0.77
VARS-216ENST00000428445 HIGD1CA8MV81 97 aa10.21□□□□□ -0.77
VARS-216ENST00000428445 C1orf196B1AJZ1 125 aa10.21□□□□□ -0.77
VARS-216ENST00000428445 SYCNQ0VAF6 134 aa10.21□□□□□ -0.77
VARS-216ENST00000428445 Q6ZRP5 223 aa10.21□□□□□ -0.77
VARS-216ENST00000428445 C7orf77A4D0Y5 90 aa10.2□□□□□ -0.78
VARS-216ENST00000428445 LINC01551Q86U37 167 aa10.2□□□□□ -0.78
VARS-216ENST00000428445 ALKAL2Q6UX46 152 aa10.19□□□□□ -0.78
VARS-216ENST00000428445 SMIM7Q9BQ49 75 aa10.19□□□□□ -0.78
VARS-216ENST00000428445 EIF5A2Q9GZV4 153 aaKnown RBP10.19□□□□□ -0.78
VARS-216ENST00000428445 IGLV4-69A0A075B6H9 119 aa10.18□□□□□ -0.78
VARS-216ENST00000428445 PTTG1IPP53801 180 aa10.18□□□□□ -0.78
VARS-216ENST00000428445 RIGQ13278 110 aa10.18□□□□□ -0.78
VARS-216ENST00000428445 RNASE13Q5GAN3 156 aaKnown RBP10.18□□□□□ -0.78
VARS-216ENST00000428445 KIR2DL4Q99706 377 aa10.18□□□□□ -0.78
VARS-216ENST00000428445 LOC107984640A0A0U1RRK4 108 aa10.17□□□□□ -0.78
VARS-216ENST00000428445 PPP1R2P9O14990 202 aa10.17□□□□□ -0.78
VARS-216ENST00000428445 MALP21145 153 aa10.17□□□□□ -0.78
VARS-216ENST00000428445 FCER1GP30273 86 aa10.17□□□□□ -0.78
VARS-216ENST00000428445 CAMPP49913 170 aa10.17□□□□□ -0.78
VARS-216ENST00000428445 CEBPGP53567 150 aa10.17□□□□□ -0.78
VARS-216ENST00000428445 TMEM18Q96B42 140 aa10.17□□□□□ -0.78
VARS-216ENST00000428445 ZNF727A8MUV8 499 aa10.16□□□□□ -0.78
VARS-216ENST00000428445 SMKR1H3BMG3 65 aa10.16□□□□□ -0.78
VARS-216ENST00000428445 COX7A2LO14548 114 aa10.16□□□□□ -0.78
VARS-216ENST00000428445 TCAPO15273 167 aa10.16□□□□□ -0.78
VARS-216ENST00000428445 AKAP14Q86UN6 197 aa10.16□□□□□ -0.78
VARS-216ENST00000428445 AMN1Q8IY45 258 aa10.16□□□□□ -0.78
VARS-216ENST00000428445 C2orf48Q96LS8 159 aa10.16□□□□□ -0.78
VARS-216ENST00000428445 LINC00862A6NCI5 91 aa10.15□□□□□ -0.78
VARS-216ENST00000428445 SUMO2P61956 95 aaKnown RBP10.15□□□□□ -0.78
VARS-216ENST00000428445 FAM74A3Q4VXF1 159 aa10.15□□□□□ -0.78
VARS-216ENST00000428445 TIMM21Q9BVV7 248 aa10.15□□□□□ -0.78
VARS-216ENST00000428445 PSORS1C2Q9UIG4 136 aa10.15□□□□□ -0.78
VARS-216ENST00000428445 APOMO95445 188 aa10.14□□□□□ -0.79
VARS-216ENST00000428445 RNF151Q2KHN1 245 aa10.14□□□□□ -0.79
VARS-216ENST00000428445 PHF5AQ7RTV0 110 aaKnown RBP10.14□□□□□ -0.79
VARS-216ENST00000428445 NUP35Q8NFH5 326 aa10.14□□□□□ -0.79
VARS-216ENST00000428445 OPRPNQ99935 248 aaPredicted RBP10.14□□□□□ -0.79
VARS-216ENST00000428445 NAT8BQ9UHF3 227 aa10.14□□□□□ -0.79
VARS-216ENST00000428445 UBE2D4Q9Y2X8 147 aa10.14□□□□□ -0.79
VARS-216ENST00000428445 V9GYV3 84 aa10.14□□□□□ -0.79
VARS-216ENST00000428445 F8WDY8 70 aa10.13□□□□□ -0.79
VARS-216ENST00000428445 C9orf116Q5BN46 136 aaPredicted RBP10.13□□□□□ -0.79
VARS-216ENST00000428445 C5orf38Q86SI9 138 aa10.13□□□□□ -0.79
VARS-216ENST00000428445 NRACQ8N912 160 aa10.13□□□□□ -0.79
VARS-216ENST00000428445 C20orf78Q9BR46 151 aa10.13□□□□□ -0.79
VARS-216ENST00000428445 TRBV24-1A0A075B6N3 115 aa10.12□□□□□ -0.79
VARS-216ENST00000428445 A0A1B0GW15 77 aa10.12□□□□□ -0.79
VARS-216ENST00000428445 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.12□□□□□ -0.79
VARS-216ENST00000428445 SRP19P09132 144 aaKnown RBP10.12□□□□□ -0.79
VARS-216ENST00000428445 RPL32P62910 135 aaKnown RBP10.12□□□□□ -0.79
VARS-216ENST00000428445 TMEM241Q24JQ0 296 aa10.12□□□□□ -0.79
VARS-216ENST00000428445 FAM104BQ5XKR9 115 aa10.12□□□□□ -0.79
VARS-216ENST00000428445 CAMK2N2Q96S95 79 aa10.12□□□□□ -0.79
VARS-216ENST00000428445 TRAV13-1A0A0B4J241 112 aa10.11□□□□□ -0.79
VARS-216ENST00000428445 MT-ND6P03923 174 aa10.11□□□□□ -0.79
VARS-216ENST00000428445 RPL18AQ02543 176 aaKnown RBP10.1□□□□□ -0.79
VARS-216ENST00000428445 C1orf137Q5JT78 98 aa10.1□□□□□ -0.79
VARS-216ENST00000428445 OR10D4PQ8NGN7 298 aa10.1□□□□□ -0.79
VARS-216ENST00000428445 KRTAP11-1Q8IUC1 163 aa10.09□□□□□ -0.79
VARS-216ENST00000428445 PRR26Q8N8Z3 221 aa10.09□□□□□ -0.79
VARS-216ENST00000428445 SMIM27A0A1W2PRY6 76 aa10.08□□□□□ -0.8
VARS-216ENST00000428445 MRPL51Q4U2R6 128 aaKnown RBP10.08□□□□□ -0.8
VARS-216ENST00000428445 Q6ZUT4 128 aa10.08□□□□□ -0.8
VARS-216ENST00000428445 FAM168BA1KXE4 195 aa10.07□□□□□ -0.8
VARS-216ENST00000428445 CKS2P33552 79 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms