RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 TSHBP01222 138 aa9.84□□□□□ -0.83
CTDSP1-202ENST00000428361 FCER1GP30273 86 aa9.84□□□□□ -0.83
CTDSP1-202ENST00000428361 XCL1P47992 114 aa9.84□□□□□ -0.83
CTDSP1-202ENST00000428361 COX6A2Q02221 97 aa9.84□□□□□ -0.83
CTDSP1-202ENST00000428361 TMEM242Q9NWH2 141 aa9.84□□□□□ -0.83
CTDSP1-202ENST00000428361 LINC00959A0A1B0GUT2 108 aa9.83□□□□□ -0.84
CTDSP1-202ENST00000428361 PPP1R2P9O14990 202 aa9.83□□□□□ -0.84
CTDSP1-202ENST00000428361 SRP19P09132 144 aaKnown RBP9.83□□□□□ -0.84
CTDSP1-202ENST00000428361 CHTF8P0CG12 524 aa9.83□□□□□ -0.84
CTDSP1-202ENST00000428361 RAB4AP20338 218 aa9.83□□□□□ -0.84
CTDSP1-202ENST00000428361 POLR2KP53803 58 aaKnown RBP9.83□□□□□ -0.84
CTDSP1-202ENST00000428361 FOXI1Q12951 378 aa9.83□□□□□ -0.84
CTDSP1-202ENST00000428361 KIR2DL4Q99706 377 aa9.83□□□□□ -0.84
CTDSP1-202ENST00000428361 NAT8BQ9UHF3 227 aa9.83□□□□□ -0.84
CTDSP1-202ENST00000428361 TCAPO15273 167 aa9.82□□□□□ -0.84
CTDSP1-202ENST00000428361 TMEM241Q24JQ0 296 aa9.82□□□□□ -0.84
CTDSP1-202ENST00000428361 MAJINQ3KP22 176 aa9.82□□□□□ -0.84
CTDSP1-202ENST00000428361 AMN1Q8IY45 258 aa9.82□□□□□ -0.84
CTDSP1-202ENST00000428361 TMEM18Q96B42 140 aa9.82□□□□□ -0.84
CTDSP1-202ENST00000428361 CDC42SE2Q9NRR3 84 aa9.82□□□□□ -0.84
CTDSP1-202ENST00000428361 ZNF561-AS1K7EIQ3 104 aa9.81□□□□□ -0.84
CTDSP1-202ENST00000428361 CD164L2Q6UWJ8 174 aa9.81□□□□□ -0.84
CTDSP1-202ENST00000428361 ZNF664Q8N3J9 261 aa9.81□□□□□ -0.84
CTDSP1-202ENST00000428361 ISOC2Q96AB3 205 aa9.81□□□□□ -0.84
CTDSP1-202ENST00000428361 CSDC2Q9Y534 153 aaKnown RBP9.81□□□□□ -0.84
CTDSP1-202ENST00000428361 V9GYV3 84 aa9.81□□□□□ -0.84
CTDSP1-202ENST00000428361 LRP1Q07954 4544 aaKnown RBP9.8□□□□□ -0.84
CTDSP1-202ENST00000428361 IGKV2-24A0A0C4DH68 120 aa9.8□□□□□ -0.84
CTDSP1-202ENST00000428361 A0A1B0GW15 77 aa9.8□□□□□ -0.84
CTDSP1-202ENST00000428361 C1orf196B1AJZ1 125 aa9.8□□□□□ -0.84
CTDSP1-202ENST00000428361 SUMO2P61956 95 aaKnown RBP9.8□□□□□ -0.84
CTDSP1-202ENST00000428361 NUP35Q8NFH5 326 aa9.8□□□□□ -0.84
CTDSP1-202ENST00000428361 CARD19Q96LW7 228 aa9.8□□□□□ -0.84
CTDSP1-202ENST00000428361 SMDT1Q9H4I9 107 aa9.8□□□□□ -0.84
CTDSP1-202ENST00000428361 S100A8P05109 93 aa9.79□□□□□ -0.84
CTDSP1-202ENST00000428361 HNRNPA3P51991 378 aaKnown RBP9.79□□□□□ -0.84
CTDSP1-202ENST00000428361 STPG4Q8N801 248 aa9.79□□□□□ -0.84
CTDSP1-202ENST00000428361 PRSS3P2Q8NHM4 247 aa9.79□□□□□ -0.84
CTDSP1-202ENST00000428361 NAT8Q9UHE5 227 aa9.79□□□□□ -0.84
CTDSP1-202ENST00000428361 PLA2G2DQ9UNK4 145 aa9.79□□□□□ -0.84
CTDSP1-202ENST00000428361 PKHD1L1Q86WI1 4243 aa9.79□□□□□ -0.84
CTDSP1-202ENST00000428361 LINC00862A6NCI5 91 aa9.78□□□□□ -0.84
CTDSP1-202ENST00000428361 PHOX2AO14813 284 aa9.78□□□□□ -0.84
CTDSP1-202ENST00000428361 GAS8-AS1O95177 125 aa9.78□□□□□ -0.84
CTDSP1-202ENST00000428361 MALP21145 153 aa9.78□□□□□ -0.84
CTDSP1-202ENST00000428361 PEA15Q15121 130 aa9.78□□□□□ -0.84
CTDSP1-202ENST00000428361 ADIRFQ15847 76 aa9.78□□□□□ -0.84
CTDSP1-202ENST00000428361 FAT3Q8TDW7 4589 aa9.78□□□□□ -0.84
CTDSP1-202ENST00000428361 RPL23P62829 140 aaKnown RBP9.77□□□□□ -0.85
CTDSP1-202ENST00000428361 SYCNQ0VAF6 134 aa9.77□□□□□ -0.85
CTDSP1-202ENST00000428361 C20orf78Q9BR46 151 aa9.77□□□□□ -0.85
CTDSP1-202ENST00000428361 COX7A2LO14548 114 aa9.76□□□□□ -0.85
CTDSP1-202ENST00000428361 APOMO95445 188 aa9.76□□□□□ -0.85
CTDSP1-202ENST00000428361 FAM104BQ5XKR9 115 aa9.76□□□□□ -0.85
CTDSP1-202ENST00000428361 TIMM21Q9BVV7 248 aa9.76□□□□□ -0.85
CTDSP1-202ENST00000428361 A0A096LNI7 61 aa9.75□□□□□ -0.85
CTDSP1-202ENST00000428361 F8W036 122 aa9.75□□□□□ -0.85
CTDSP1-202ENST00000428361 CAMPP49913 170 aa9.75□□□□□ -0.85
CTDSP1-202ENST00000428361 RPL32P62910 135 aaKnown RBP9.75□□□□□ -0.85
CTDSP1-202ENST00000428361 NRACQ8N912 160 aa9.75□□□□□ -0.85
CTDSP1-202ENST00000428361 UBE2D4Q9Y2X8 147 aa9.75□□□□□ -0.85
CTDSP1-202ENST00000428361 SMIM27A0A1W2PRY6 76 aa9.74□□□□□ -0.85
CTDSP1-202ENST00000428361 SMKR1H3BMG3 65 aa9.74□□□□□ -0.85
CTDSP1-202ENST00000428361 CKS2P33552 79 aa9.74□□□□□ -0.85
CTDSP1-202ENST00000428361 MRPL51Q4U2R6 128 aaKnown RBP9.74□□□□□ -0.85
CTDSP1-202ENST00000428361 IGLV4-69A0A075B6H9 119 aa9.73□□□□□ -0.85
CTDSP1-202ENST00000428361 TRBV24-1A0A075B6N3 115 aa9.73□□□□□ -0.85
CTDSP1-202ENST00000428361 LOC107984640A0A0U1RRK4 108 aa9.73□□□□□ -0.85
CTDSP1-202ENST00000428361 PRR3P79522 188 aaKnown RBP9.73□□□□□ -0.85
CTDSP1-202ENST00000428361 TRAV13-1A0A0B4J241 112 aa9.72□□□□□ -0.85
CTDSP1-202ENST00000428361 PPBPP02775 128 aa9.72□□□□□ -0.85
CTDSP1-202ENST00000428361 CAMK2N2Q96S95 79 aa9.72□□□□□ -0.85
CTDSP1-202ENST00000428361 HBBP68871 147 aa9.71□□□□□ -0.86
CTDSP1-202ENST00000428361 C2orf48Q96LS8 159 aa9.71□□□□□ -0.86
CTDSP1-202ENST00000428361 SPANXA1Q9NS26 97 aa9.71□□□□□ -0.86
CTDSP1-202ENST00000428361 PTTG1IPP53801 180 aa9.7□□□□□ -0.86
CTDSP1-202ENST00000428361 Q6ZRP5 223 aa9.7□□□□□ -0.86
CTDSP1-202ENST00000428361 LINC00526Q96FQ7 95 aa9.7□□□□□ -0.86
CTDSP1-202ENST00000428361 F8WDY8 70 aa9.69□□□□□ -0.86
CTDSP1-202ENST00000428361 TNFRSF6BO95407 300 aa9.69□□□□□ -0.86
CTDSP1-202ENST00000428361 MT1HL1P0DM35 61 aa9.69□□□□□ -0.86
CTDSP1-202ENST00000428361 REG3GQ6UW15 175 aa9.69□□□□□ -0.86
CTDSP1-202ENST00000428361 SPINK6Q6UWN8 80 aa9.69□□□□□ -0.86
CTDSP1-202ENST00000428361 Q6ZUT4 128 aa9.69□□□□□ -0.86
CTDSP1-202ENST00000428361 OR10D4PQ8NGN7 298 aa9.69□□□□□ -0.86
CTDSP1-202ENST00000428361 SMIM2Q9BVW6 85 aa9.69□□□□□ -0.86
CTDSP1-202ENST00000428361 GAGE2BQ13066 116 aa9.68□□□□□ -0.86
CTDSP1-202ENST00000428361 ATP5L2Q7Z4Y8 100 aa9.68□□□□□ -0.86
CTDSP1-202ENST00000428361 C9JQL5 133 aa9.67□□□□□ -0.86
CTDSP1-202ENST00000428361 D6R8Y8 96 aa9.67□□□□□ -0.86
CTDSP1-202ENST00000428361 MRPS36P82909 103 aaKnown RBP9.67□□□□□ -0.86
CTDSP1-202ENST00000428361 SPAG11BQ08648 103 aa9.67□□□□□ -0.86
CTDSP1-202ENST00000428361 RNF151Q2KHN1 245 aa9.67□□□□□ -0.86
CTDSP1-202ENST00000428361 RNASE13Q5GAN3 156 aaKnown RBP9.67□□□□□ -0.86
CTDSP1-202ENST00000428361 MRPL54Q6P161 138 aaKnown RBP9.67□□□□□ -0.86
CTDSP1-202ENST00000428361 RAB5AP20339 215 aa9.66□□□□□ -0.86
CTDSP1-202ENST00000428361 C5orf38Q86SI9 138 aa9.66□□□□□ -0.86
CTDSP1-202ENST00000428361 ORMDL3Q8N138 153 aa9.66□□□□□ -0.86
CTDSP1-202ENST00000428361 LINC01600Q96MT4 127 aa9.66□□□□□ -0.86
CTDSP1-202ENST00000428361 A0A1B0GXF2 115 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms