RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 CHCHD10Q8WYQ3 142 aaPredicted RBP7.99□□□□□ -1.13
LINC00339-203ENST00000420503 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.98□□□□□ -1.13
LINC00339-203ENST00000420503 IGKV2-29A2NJV5 120 aaPredicted RBP7.98□□□□□ -1.13
LINC00339-203ENST00000420503 ADCYAP1P18509 176 aa7.98□□□□□ -1.13
LINC00339-203ENST00000420503 GVQW2A0A096LPI5 108 aaPredicted RBP7.97□□□□□ -1.13
LINC00339-203ENST00000420503 TMEM218A2RU14 115 aa7.97□□□□□ -1.13
LINC00339-203ENST00000420503 HIGD1CA8MV81 97 aa7.97□□□□□ -1.13
LINC00339-203ENST00000420503 UBE2L6O14933 153 aa7.97□□□□□ -1.13
LINC00339-203ENST00000420503 COMMD7Q86VX2 200 aa7.97□□□□□ -1.13
LINC00339-203ENST00000420503 RPL39LQ96EH5 51 aaKnown RBP7.97□□□□□ -1.13
LINC00339-203ENST00000420503 PGLYRP4Q96LB8 373 aa7.97□□□□□ -1.13
LINC00339-203ENST00000420503 H7C1H1 209 aa7.96□□□□□ -1.14
LINC00339-203ENST00000420503 PNRC1Q12796 327 aaPredicted RBP7.96□□□□□ -1.14
LINC00339-203ENST00000420503 FOXI1Q12951 378 aa7.96□□□□□ -1.14
LINC00339-203ENST00000420503 SRSF9Q13242 221 aaKnown RBP eCLIP7.96□□□□□ -1.14
LINC00339-203ENST00000420503 COTL1Q14019 142 aa7.96□□□□□ -1.14
LINC00339-203ENST00000420503 NIT2Q9NQR4 276 aa7.96□□□□□ -1.14
LINC00339-203ENST00000420503 SMIM27A0A1W2PRY6 76 aa7.95□□□□□ -1.14
LINC00339-203ENST00000420503 TRGC1P0CF51 173 aa7.95□□□□□ -1.14
LINC00339-203ENST00000420503 TWIST1Q15672 202 aa7.95□□□□□ -1.14
LINC00339-203ENST00000420503 GATD1Q8NB37 220 aa7.95□□□□□ -1.14
LINC00339-203ENST00000420503 NUP35Q8NFH5 326 aa7.95□□□□□ -1.14
LINC00339-203ENST00000420503 XCL1P47992 114 aa7.94□□□□□ -1.14
LINC00339-203ENST00000420503 SPINK6Q6UWN8 80 aa7.94□□□□□ -1.14
LINC00339-203ENST00000420503 SEC11CQ9BY50 192 aa7.94□□□□□ -1.14
LINC00339-203ENST00000420503 A0A1B0GUT8 65 aa7.93□□□□□ -1.14
LINC00339-203ENST00000420503 F8W036 122 aa7.93□□□□□ -1.14
LINC00339-203ENST00000420503 C10orf91Q5T1B1 145 aa7.93□□□□□ -1.14
LINC00339-203ENST00000420503 RNASEKQ6P5S7 137 aaKnown RBP7.93□□□□□ -1.14
LINC00339-203ENST00000420503 CFAP161Q6P656 301 aa7.93□□□□□ -1.14
LINC00339-203ENST00000420503 NAT8BQ9UHF3 227 aa7.93□□□□□ -1.14
LINC00339-203ENST00000420503 FGF6P10767 208 aa7.92□□□□□ -1.14
LINC00339-203ENST00000420503 AMMECR1LQ6DCA0 310 aa7.92□□□□□ -1.14
LINC00339-203ENST00000420503 A0A1W2PNN7 141 aa7.91□□□□□ -1.14
LINC00339-203ENST00000420503 PPP1R2P9O14990 202 aa7.91□□□□□ -1.14
LINC00339-203ENST00000420503 REG3GQ6UW15 175 aa7.91□□□□□ -1.14
LINC00339-203ENST00000420503 BORCS7Q96B45 105 aa7.91□□□□□ -1.14
LINC00339-203ENST00000420503 ANAPC16Q96DE5 110 aa7.91□□□□□ -1.14
LINC00339-203ENST00000420503 TMEM191AQ9H0A3 160 aa7.91□□□□□ -1.14
LINC00339-203ENST00000420503 CCL25O15444 150 aa7.9□□□□□ -1.14
LINC00339-203ENST00000420503 CARD19Q96LW7 228 aa7.9□□□□□ -1.14
LINC00339-203ENST00000420503 CARHSP1Q9Y2V2 147 aaKnown RBP7.9□□□□□ -1.14
LINC00339-203ENST00000420503 A0A1B0GXF2 115 aa7.89□□□□□ -1.15
LINC00339-203ENST00000420503 MT-ND4LP03901 98 aa7.89□□□□□ -1.15
LINC00339-203ENST00000420503 RIGQ13278 110 aa7.89□□□□□ -1.15
LINC00339-203ENST00000420503 Q6ZRP5 223 aa7.89□□□□□ -1.15
LINC00339-203ENST00000420503 SMIM15Q7Z3B0 74 aa7.89□□□□□ -1.15
LINC00339-203ENST00000420503 LINC00959A0A1B0GUT2 108 aa7.88□□□□□ -1.15
LINC00339-203ENST00000420503 APCSP02743 223 aa7.88□□□□□ -1.15
LINC00339-203ENST00000420503 PTTG1IPP53801 180 aa7.88□□□□□ -1.15
LINC00339-203ENST00000420503 GAGE2BQ13066 116 aa7.88□□□□□ -1.15
LINC00339-203ENST00000420503 A0A1B0GW15 77 aa7.87□□□□□ -1.15
LINC00339-203ENST00000420503 SDHAF1A6NFY7 115 aa7.87□□□□□ -1.15
LINC00339-203ENST00000420503 RAB4AP20338 218 aa7.87□□□□□ -1.15
LINC00339-203ENST00000420503 AMN1Q8IY45 258 aa7.87□□□□□ -1.15
LINC00339-203ENST00000420503 OR5A1Q8NGJ0 315 aa7.87□□□□□ -1.15
LINC00339-203ENST00000420503 TMEM242Q9NWH2 141 aa7.87□□□□□ -1.15
LINC00339-203ENST00000420503 IGHV1-58A0A0C4DH39 117 aa7.86□□□□□ -1.15
LINC00339-203ENST00000420503 TSHBP01222 138 aa7.86□□□□□ -1.15
LINC00339-203ENST00000420503 HBBP68871 147 aa7.86□□□□□ -1.15
LINC00339-203ENST00000420503 SYCNQ0VAF6 134 aa7.86□□□□□ -1.15
LINC00339-203ENST00000420503 MRPL54Q6P161 138 aaKnown RBP7.86□□□□□ -1.15
LINC00339-203ENST00000420503 ATP5L2Q7Z4Y8 100 aa7.86□□□□□ -1.15
LINC00339-203ENST00000420503 KRTAP11-1Q8IUC1 163 aa7.86□□□□□ -1.15
LINC00339-203ENST00000420503 PRR26Q8N8Z3 221 aa7.86□□□□□ -1.15
LINC00339-203ENST00000420503 CTDSP1Q9GZU7 261 aa7.86□□□□□ -1.15
LINC00339-203ENST00000420503 PSORS1C2Q9UIG4 136 aa7.86□□□□□ -1.15
LINC00339-203ENST00000420503 MUC2Q02817 5179 aa7.86□□□□□ -1.15
LINC00339-203ENST00000420503 IGLV4-69A0A075B6H9 119 aa7.85□□□□□ -1.15
LINC00339-203ENST00000420503 CAMPP49913 170 aa7.85□□□□□ -1.15
LINC00339-203ENST00000420503 RNASE13Q5GAN3 156 aaKnown RBP7.85□□□□□ -1.15
LINC00339-203ENST00000420503 FAM104BQ5XKR9 115 aa7.85□□□□□ -1.15
LINC00339-203ENST00000420503 PHF5AQ7RTV0 110 aaKnown RBP7.85□□□□□ -1.15
LINC00339-203ENST00000420503 IMMP2LQ96T52 175 aa7.85□□□□□ -1.15
LINC00339-203ENST00000420503 TRBV6-5A0A0K0K1A5 114 aa7.84□□□□□ -1.15
LINC00339-203ENST00000420503 C7orf77A4D0Y5 90 aa7.84□□□□□ -1.15
LINC00339-203ENST00000420503 NCR2O95944 276 aa7.84□□□□□ -1.15
LINC00339-203ENST00000420503 ESDP10768 282 aa7.84□□□□□ -1.15
LINC00339-203ENST00000420503 MRAP2Q96G30 205 aa7.84□□□□□ -1.15
LINC00339-203ENST00000420503 LINC00474Q9P2X8 69 aa7.84□□□□□ -1.15
LINC00339-203ENST00000420503 S100A8P05109 93 aa7.83□□□□□ -1.16
LINC00339-203ENST00000420503 RHEBQ15382 184 aa7.83□□□□□ -1.16
LINC00339-203ENST00000420503 MRPL51Q4U2R6 128 aaKnown RBP7.83□□□□□ -1.16
LINC00339-203ENST00000420503 C9orf116Q5BN46 136 aaPredicted RBP7.83□□□□□ -1.16
LINC00339-203ENST00000420503 SMKR1H3BMG3 65 aa7.82□□□□□ -1.16
LINC00339-203ENST00000420503 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.82□□□□□ -1.16
LINC00339-203ENST00000420503 H7C423 109 aa7.82□□□□□ -1.16
LINC00339-203ENST00000420503 ZNF561-AS1K7EIQ3 104 aa7.82□□□□□ -1.16
LINC00339-203ENST00000420503 ZNF25P17030 456 aaPredicted RBP7.82□□□□□ -1.16
LINC00339-203ENST00000420503 PMCHP20382 165 aa7.82□□□□□ -1.16
LINC00339-203ENST00000420503 C1orf137Q5JT78 98 aa7.82□□□□□ -1.16
LINC00339-203ENST00000420503 CD164L2Q6UWJ8 174 aa7.82□□□□□ -1.16
LINC00339-203ENST00000420503 NRACQ8N912 160 aa7.82□□□□□ -1.16
LINC00339-203ENST00000420503 BTF3L4Q96K17 158 aa7.82□□□□□ -1.16
LINC00339-203ENST00000420503 OPRPNQ99935 248 aaPredicted RBP7.82□□□□□ -1.16
LINC00339-203ENST00000420503 CDC42SE2Q9NRR3 84 aa7.82□□□□□ -1.16
LINC00339-203ENST00000420503 TRAV9-1A0A075B6T8 112 aa7.81□□□□□ -1.16
LINC00339-203ENST00000420503 LOC107984640A0A0U1RRK4 108 aa7.81□□□□□ -1.16
LINC00339-203ENST00000420503 FAM168BA1KXE4 195 aa7.81□□□□□ -1.16
LINC00339-203ENST00000420503 I3L3M4 83 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms