RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 TMEM101Q96IK0 257 aa11.37□□□□□ -0.59
CPNE1-210ENST00000416778 CDC42SE2Q9NRR3 84 aa11.37□□□□□ -0.59
CPNE1-210ENST00000416778 PKHD1L1Q86WI1 4243 aa11.37□□□□□ -0.59
CPNE1-210ENST00000416778 SMKR1H3BMG3 65 aa11.36□□□□□ -0.59
CPNE1-210ENST00000416778 HNRNPA3P51991 378 aaKnown RBP11.36□□□□□ -0.59
CPNE1-210ENST00000416778 HIGD2BQ4VC39 106 aa11.36□□□□□ -0.59
CPNE1-210ENST00000416778 MRPL52Q86TS9 123 aaKnown RBP11.36□□□□□ -0.59
CPNE1-210ENST00000416778 NRACQ8N912 160 aa11.36□□□□□ -0.59
CPNE1-210ENST00000416778 BTF3L4Q96K17 158 aa11.36□□□□□ -0.59
CPNE1-210ENST00000416778 NAT8BQ9UHF3 227 aa11.36□□□□□ -0.59
CPNE1-210ENST00000416778 A0A087WYN8 130 aa11.35□□□□□ -0.59
CPNE1-210ENST00000416778 SMIM27A0A1W2PRY6 76 aa11.35□□□□□ -0.59
CPNE1-210ENST00000416778 CHTF8P0CG12 524 aa11.35□□□□□ -0.59
CPNE1-210ENST00000416778 PEA15Q15121 130 aa11.35□□□□□ -0.59
CPNE1-210ENST00000416778 NAT8Q9UHE5 227 aa11.35□□□□□ -0.59
CPNE1-210ENST00000416778 GVQW2A0A096LPI5 108 aaPredicted RBP11.34□□□□□ -0.59
CPNE1-210ENST00000416778 COX6A2Q02221 97 aa11.34□□□□□ -0.59
CPNE1-210ENST00000416778 ADIRFQ15847 76 aa11.34□□□□□ -0.59
CPNE1-210ENST00000416778 FAM104BQ5XKR9 115 aa11.34□□□□□ -0.59
CPNE1-210ENST00000416778 ZNF664Q8N3J9 261 aa11.34□□□□□ -0.59
CPNE1-210ENST00000416778 SPACA4Q8TDM5 124 aa11.34□□□□□ -0.59
CPNE1-210ENST00000416778 SMDT1Q9H4I9 107 aa11.34□□□□□ -0.59
CPNE1-210ENST00000416778 CCL25O15444 150 aa11.33□□□□□ -0.6
CPNE1-210ENST00000416778 PPP1R17O96001 155 aa11.33□□□□□ -0.6
CPNE1-210ENST00000416778 XCL1P47992 114 aa11.33□□□□□ -0.6
CPNE1-210ENST00000416778 MRPL51Q4U2R6 128 aaKnown RBP11.33□□□□□ -0.6
CPNE1-210ENST00000416778 PRSS3P2Q8NHM4 247 aa11.33□□□□□ -0.6
CPNE1-210ENST00000416778 SUMO2P61956 95 aaKnown RBP11.32□□□□□ -0.6
CPNE1-210ENST00000416778 PLAC8Q9NZF1 115 aa11.32□□□□□ -0.6
CPNE1-210ENST00000416778 C7orf77A4D0Y5 90 aa11.31□□□□□ -0.6
CPNE1-210ENST00000416778 SS18Q15532 418 aa11.31□□□□□ -0.6
CPNE1-210ENST00000416778 CAMPP49913 170 aa11.3□□□□□ -0.6
CPNE1-210ENST00000416778 CD164L2Q6UWJ8 174 aa11.3□□□□□ -0.6
CPNE1-210ENST00000416778 CSDC2Q9Y534 153 aaKnown RBP11.3□□□□□ -0.6
CPNE1-210ENST00000416778 TRBV24-1A0A075B6N3 115 aa11.29□□□□□ -0.6
CPNE1-210ENST00000416778 IGHV1-58A0A0C4DH39 117 aa11.29□□□□□ -0.6
CPNE1-210ENST00000416778 LINC00862A6NCI5 91 aa11.29□□□□□ -0.6
CPNE1-210ENST00000416778 FCER1GP30273 86 aa11.29□□□□□ -0.6
CPNE1-210ENST00000416778 A0A1B0GW15 77 aa11.28□□□□□ -0.6
CPNE1-210ENST00000416778 PPP1R2P9O14990 202 aa11.28□□□□□ -0.6
CPNE1-210ENST00000416778 LINC00526Q96FQ7 95 aa11.28□□□□□ -0.6
CPNE1-210ENST00000416778 KIR2DL4Q99706 377 aa11.28□□□□□ -0.6
CPNE1-210ENST00000416778 C20orf78Q9BR46 151 aa11.28□□□□□ -0.6
CPNE1-210ENST00000416778 UBE2D4Q9Y2X8 147 aa11.28□□□□□ -0.6
CPNE1-210ENST00000416778 C1orf196B1AJZ1 125 aa11.26□□□□□ -0.61
CPNE1-210ENST00000416778 CKS2P33552 79 aa11.26□□□□□ -0.61
CPNE1-210ENST00000416778 RPL32P62910 135 aaKnown RBP11.26□□□□□ -0.61
CPNE1-210ENST00000416778 MAJINQ3KP22 176 aa11.26□□□□□ -0.61
CPNE1-210ENST00000416778 IGKV2-24A0A0C4DH68 120 aa11.25□□□□□ -0.61
CPNE1-210ENST00000416778 SERTAD4-AS1Q5TG53 156 aa11.25□□□□□ -0.61
CPNE1-210ENST00000416778 Q6ZRU5 148 aa11.25□□□□□ -0.61
CPNE1-210ENST00000416778 TIMM21Q9BVV7 248 aa11.25□□□□□ -0.61
CPNE1-210ENST00000416778 A0A096LNI7 61 aa11.24□□□□□ -0.61
CPNE1-210ENST00000416778 A0A1B0GXF2 115 aa11.24□□□□□ -0.61
CPNE1-210ENST00000416778 TNFRSF6BO95407 300 aa11.24□□□□□ -0.61
CPNE1-210ENST00000416778 SMAGPQ0VAQ4 97 aa11.24□□□□□ -0.61
CPNE1-210ENST00000416778 STPG4Q8N801 248 aa11.24□□□□□ -0.61
CPNE1-210ENST00000416778 FAM104AQ969W3 186 aa11.24□□□□□ -0.61
CPNE1-210ENST00000416778 ZNF561-AS1K7EIQ3 104 aa11.23□□□□□ -0.61
CPNE1-210ENST00000416778 PHOX2AO14813 284 aa11.23□□□□□ -0.61
CPNE1-210ENST00000416778 RNASE13Q5GAN3 156 aaKnown RBP11.23□□□□□ -0.61
CPNE1-210ENST00000416778 MRPL54Q6P161 138 aaKnown RBP11.23□□□□□ -0.61
CPNE1-210ENST00000416778 S100A8P05109 93 aa11.22□□□□□ -0.61
CPNE1-210ENST00000416778 HBBP68871 147 aa11.22□□□□□ -0.61
CPNE1-210ENST00000416778 SYCNQ0VAF6 134 aa11.22□□□□□ -0.61
CPNE1-210ENST00000416778 TMEM18Q96B42 140 aa11.22□□□□□ -0.61
CPNE1-210ENST00000416778 TRAV13-1A0A0B4J241 112 aa11.21□□□□□ -0.61
CPNE1-210ENST00000416778 D6R8Y8 96 aa11.21□□□□□ -0.61
CPNE1-210ENST00000416778 F8W036 122 aa11.21□□□□□ -0.61
CPNE1-210ENST00000416778 COX7A2LO14548 114 aa11.21□□□□□ -0.61
CPNE1-210ENST00000416778 TCAPO15273 167 aa11.21□□□□□ -0.61
CPNE1-210ENST00000416778 C7orf33Q8WU49 177 aa11.21□□□□□ -0.61
CPNE1-210ENST00000416778 CARD19Q96LW7 228 aa11.21□□□□□ -0.61
CPNE1-210ENST00000416778 LINC00474Q9P2X8 69 aa11.21□□□□□ -0.61
CPNE1-210ENST00000416778 IGLV4-69A0A075B6H9 119 aa11.2□□□□□ -0.62
CPNE1-210ENST00000416778 MT1HL1P0DM35 61 aa11.2□□□□□ -0.62
CPNE1-210ENST00000416778 RPL39P62891 51 aaKnown RBP11.2□□□□□ -0.62
CPNE1-210ENST00000416778 SMIM2Q9BVW6 85 aa11.2□□□□□ -0.62
CPNE1-210ENST00000416778 HMCN2Q8NDA2 5059 aa11.19□□□□□ -0.62
CPNE1-210ENST00000416778 NPYP01303 97 aa11.19□□□□□ -0.62
CPNE1-210ENST00000416778 PPBPP02775 128 aa11.19□□□□□ -0.62
CPNE1-210ENST00000416778 MALP21145 153 aa11.19□□□□□ -0.62
CPNE1-210ENST00000416778 Q6ZUT4 128 aa11.19□□□□□ -0.62
CPNE1-210ENST00000416778 C5orf38Q86SI9 138 aa11.19□□□□□ -0.62
CPNE1-210ENST00000416778 OPRPNQ99935 248 aaPredicted RBP11.18□□□□□ -0.62
CPNE1-210ENST00000416778 TMEM136Q6ZRR5 245 aa11.17□□□□□ -0.62
CPNE1-210ENST00000416778 ATP5L2Q7Z4Y8 100 aa11.17□□□□□ -0.62
CPNE1-210ENST00000416778 PKIGQ9Y2B9 76 aa11.17□□□□□ -0.62
CPNE1-210ENST00000416778 MRPS36P82909 103 aaKnown RBP11.16□□□□□ -0.62
CPNE1-210ENST00000416778 C2orf48Q96LS8 159 aa11.16□□□□□ -0.62
CPNE1-210ENST00000416778 SPANXA1Q9NS26 97 aa11.16□□□□□ -0.62
CPNE1-210ENST00000416778 PRSS47A8MTI9 375 aa11.15□□□□□ -0.62
CPNE1-210ENST00000416778 PTTG1IPP53801 180 aa11.15□□□□□ -0.62
CPNE1-210ENST00000416778 ORMDL3Q8N138 153 aa11.15□□□□□ -0.62
CPNE1-210ENST00000416778 IGHV3OR16-9A0A0B4J2B5 98 aa11.14□□□□□ -0.63
CPNE1-210ENST00000416778 LOC107984640A0A0U1RRK4 108 aa11.14□□□□□ -0.63
CPNE1-210ENST00000416778 PRR3P79522 188 aaKnown RBP11.14□□□□□ -0.63
CPNE1-210ENST00000416778 PRELID3AQ96N28 172 aa11.14□□□□□ -0.63
CPNE1-210ENST00000416778 CAMK2N2Q96S95 79 aa11.14□□□□□ -0.63
CPNE1-210ENST00000416778 APOMO95445 188 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms