RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 MRAP2Q96G30 205 aa11.99□□□□□ -0.49
UBXN4-202ENST00000415164 FAM231BA6NCW3 169 aa11.98□□□□□ -0.49
UBXN4-202ENST00000415164 ST20Q9HBF5 79 aa11.98□□□□□ -0.49
UBXN4-202ENST00000415164 MALP21145 153 aa11.97□□□□□ -0.49
UBXN4-202ENST00000415164 CAMPP49913 170 aa11.97□□□□□ -0.49
UBXN4-202ENST00000415164 BORCS7Q96B45 105 aa11.97□□□□□ -0.49
UBXN4-202ENST00000415164 GAS8-AS1O95177 125 aa11.96□□□□□ -0.49
UBXN4-202ENST00000415164 TSHBP01222 138 aa11.96□□□□□ -0.49
UBXN4-202ENST00000415164 CEBPGP53567 150 aa11.96□□□□□ -0.49
UBXN4-202ENST00000415164 PTTG1IPP53801 180 aa11.96□□□□□ -0.49
UBXN4-202ENST00000415164 LOC107984640A0A0U1RRK4 108 aa11.95□□□□□ -0.5
UBXN4-202ENST00000415164 SRSF9Q13242 221 aaKnown RBP eCLIP11.95□□□□□ -0.5
UBXN4-202ENST00000415164 CD164L2Q6UWJ8 174 aa11.95□□□□□ -0.5
UBXN4-202ENST00000415164 ISOC2Q96AB3 205 aa11.95□□□□□ -0.5
UBXN4-202ENST00000415164 IGLV4-69A0A075B6H9 119 aa11.94□□□□□ -0.5
UBXN4-202ENST00000415164 ESDP10768 282 aa11.94□□□□□ -0.5
UBXN4-202ENST00000415164 ZNF664Q8N3J9 261 aa11.94□□□□□ -0.5
UBXN4-202ENST00000415164 CDC42SE2Q9NRR3 84 aa11.94□□□□□ -0.5
UBXN4-202ENST00000415164 TRBV6-5A0A0K0K1A5 114 aa11.93□□□□□ -0.5
UBXN4-202ENST00000415164 A8MWL6 223 aa11.93□□□□□ -0.5
UBXN4-202ENST00000415164 TAGLN2P37802 199 aaKnown RBP11.93□□□□□ -0.5
UBXN4-202ENST00000415164 CAMK2N2Q96S95 79 aa11.93□□□□□ -0.5
UBXN4-202ENST00000415164 C7orf77A4D0Y5 90 aa11.92□□□□□ -0.5
UBXN4-202ENST00000415164 MT-ND6P03923 174 aa11.92□□□□□ -0.5
UBXN4-202ENST00000415164 RPL18AQ02543 176 aaKnown RBP11.92□□□□□ -0.5
UBXN4-202ENST00000415164 RNASE13Q5GAN3 156 aaKnown RBP11.92□□□□□ -0.5
UBXN4-202ENST00000415164 A0A1W2PNN7 141 aa11.91□□□□□ -0.5
UBXN4-202ENST00000415164 COX7A2LO14548 114 aa11.91□□□□□ -0.5
UBXN4-202ENST00000415164 FCER1GP30273 86 aa11.91□□□□□ -0.5
UBXN4-202ENST00000415164 MRPL52Q86TS9 123 aaKnown RBP11.9□□□□□ -0.5
UBXN4-202ENST00000415164 SLC51BQ86UW2 128 aa11.9□□□□□ -0.5
UBXN4-202ENST00000415164 TRAV13-1A0A0B4J241 112 aa11.89□□□□□ -0.51
UBXN4-202ENST00000415164 C1orf137Q5JT78 98 aa11.89□□□□□ -0.51
UBXN4-202ENST00000415164 PSORS1C2Q9UIG4 136 aa11.89□□□□□ -0.51
UBXN4-202ENST00000415164 C1orf196B1AJZ1 125 aa11.88□□□□□ -0.51
UBXN4-202ENST00000415164 SMKR1H3BMG3 65 aa11.88□□□□□ -0.51
UBXN4-202ENST00000415164 C9orf116Q5BN46 136 aaPredicted RBP11.88□□□□□ -0.51
UBXN4-202ENST00000415164 FAM231DQ6ZW35 169 aa11.88□□□□□ -0.51
UBXN4-202ENST00000415164 C5orf38Q86SI9 138 aa11.88□□□□□ -0.51
UBXN4-202ENST00000415164 AMN1Q8IY45 258 aa11.88□□□□□ -0.51
UBXN4-202ENST00000415164 NUP35Q8NFH5 326 aa11.88□□□□□ -0.51
UBXN4-202ENST00000415164 LPAP08519 4548 aa11.88□□□□□ -0.51
UBXN4-202ENST00000415164 A0A1B0GUT8 65 aa11.87□□□□□ -0.51
UBXN4-202ENST00000415164 HIGD1CA8MV81 97 aa11.87□□□□□ -0.51
UBXN4-202ENST00000415164 APOMO95445 188 aa11.87□□□□□ -0.51
UBXN4-202ENST00000415164 POLR2KP53803 58 aaKnown RBP11.87□□□□□ -0.51
UBXN4-202ENST00000415164 PHF5AQ7RTV0 110 aaKnown RBP11.87□□□□□ -0.51
UBXN4-202ENST00000415164 OPRPNQ99935 248 aaPredicted RBP11.87□□□□□ -0.51
UBXN4-202ENST00000415164 RAB4AP20338 218 aa11.86□□□□□ -0.51
UBXN4-202ENST00000415164 TMEM191AQ9H0A3 160 aa11.86□□□□□ -0.51
UBXN4-202ENST00000415164 TRBV27A0A0K0K1C4 114 aa11.85□□□□□ -0.51
UBXN4-202ENST00000415164 TMEM250H0YL14 139 aa11.85□□□□□ -0.51
UBXN4-202ENST00000415164 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.85□□□□□ -0.51
UBXN4-202ENST00000415164 SPAG11BQ08648 103 aa11.85□□□□□ -0.51
UBXN4-202ENST00000415164 CT83Q5H943 113 aa11.85□□□□□ -0.51
UBXN4-202ENST00000415164 VCYO14598 125 aa11.84□□□□□ -0.51
UBXN4-202ENST00000415164 SMAGPQ0VAQ4 97 aa11.84□□□□□ -0.51
UBXN4-202ENST00000415164 TSKUQ8WUA8 353 aa11.84□□□□□ -0.51
UBXN4-202ENST00000415164 FAM210AQ96ND0 272 aa11.84□□□□□ -0.51
UBXN4-202ENST00000415164 Q6ZUT4 128 aa11.83□□□□□ -0.52
UBXN4-202ENST00000415164 KIR2DL4Q99706 377 aa11.83□□□□□ -0.52
UBXN4-202ENST00000415164 UBE2D4Q9Y2X8 147 aa11.83□□□□□ -0.52
UBXN4-202ENST00000415164 C2orf48Q96LS8 159 aa11.82□□□□□ -0.52
UBXN4-202ENST00000415164 SMIM7Q9BQ49 75 aa11.82□□□□□ -0.52
UBXN4-202ENST00000415164 ALKAL2Q6UX46 152 aa11.81□□□□□ -0.52
UBXN4-202ENST00000415164 PRR26Q8N8Z3 221 aa11.81□□□□□ -0.52
UBXN4-202ENST00000415164 SUMO2P61956 95 aaKnown RBP11.8□□□□□ -0.52
UBXN4-202ENST00000415164 BLOC1S1P78537 153 aa11.8□□□□□ -0.52
UBXN4-202ENST00000415164 TCTE3Q8IZS6 198 aa11.8□□□□□ -0.52
UBXN4-202ENST00000415164 EIF5A2Q9GZV4 153 aaKnown RBP11.8□□□□□ -0.52
UBXN4-202ENST00000415164 A0A087WZ39 114 aa11.79□□□□□ -0.52
UBXN4-202ENST00000415164 RIGQ13278 110 aa11.79□□□□□ -0.52
UBXN4-202ENST00000415164 ORAOV1Q8WV07 137 aa11.79□□□□□ -0.52
UBXN4-202ENST00000415164 TMEM18Q96B42 140 aa11.79□□□□□ -0.52
UBXN4-202ENST00000415164 PPP1R17O96001 155 aa11.78□□□□□ -0.52
UBXN4-202ENST00000415164 LINC01551Q86U37 167 aa11.78□□□□□ -0.52
UBXN4-202ENST00000415164 DIRC1Q969H9 104 aa11.78□□□□□ -0.52
UBXN4-202ENST00000415164 CSDC2Q9Y534 153 aaKnown RBP11.78□□□□□ -0.52
UBXN4-202ENST00000415164 ZNF727A8MUV8 499 aa11.77□□□□□ -0.53
UBXN4-202ENST00000415164 IGLV7-43P04211 117 aa11.77□□□□□ -0.53
UBXN4-202ENST00000415164 FAM19A5Q7Z5A7 132 aaPredicted RBP11.77□□□□□ -0.53
UBXN4-202ENST00000415164 NRACQ8N912 160 aa11.77□□□□□ -0.53
UBXN4-202ENST00000415164 FAM168BA1KXE4 195 aa11.76□□□□□ -0.53
UBXN4-202ENST00000415164 OR10D4PQ8NGN7 298 aa11.76□□□□□ -0.53
UBXN4-202ENST00000415164 OSTCQ9NRP0 149 aa11.76□□□□□ -0.53
UBXN4-202ENST00000415164 PPP1R2P9O14990 202 aa11.75□□□□□ -0.53
UBXN4-202ENST00000415164 NDUFA1O15239 70 aa11.75□□□□□ -0.53
UBXN4-202ENST00000415164 RNF151Q2KHN1 245 aa11.75□□□□□ -0.53
UBXN4-202ENST00000415164 RPL39P62891 51 aaKnown RBP11.74□□□□□ -0.53
UBXN4-202ENST00000415164 MRPL51Q4U2R6 128 aaKnown RBP11.74□□□□□ -0.53
UBXN4-202ENST00000415164 GAGE2EQ4V326 116 aa11.74□□□□□ -0.53
UBXN4-202ENST00000415164 IMMP2LQ96T52 175 aa11.74□□□□□ -0.53
UBXN4-202ENST00000415164 GAGE2DQ9UEU5 116 aa11.74□□□□□ -0.53
UBXN4-202ENST00000415164 MRPL35Q9NZE8 188 aaKnown RBP11.73□□□□□ -0.53
UBXN4-202ENST00000415164 V9GYV3 84 aa11.73□□□□□ -0.53
UBXN4-202ENST00000415164 H0Y9J4 135 aa11.72□□□□□ -0.53
UBXN4-202ENST00000415164 UBE2BP63146 152 aa11.72□□□□□ -0.53
UBXN4-202ENST00000415164 C10orf25Q5T742 122 aa11.72□□□□□ -0.53
UBXN4-202ENST00000415164 TIMM21Q9BVV7 248 aa11.72□□□□□ -0.53
UBXN4-202ENST00000415164 IFITM10A6NMD0 228 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms