RNA–Protein interactions for RNA: ENST00000412256.1

RAB11FIP3-202, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-202ENST00000412256 KRTAP10-8P60410 259 aa8.66□□□□□ -1.02
RAB11FIP3-202ENST00000412256 SYCNQ0VAF6 134 aa8.66□□□□□ -1.02
RAB11FIP3-202ENST00000412256 Q6ZRP5 223 aa8.66□□□□□ -1.02
RAB11FIP3-202ENST00000412256 MRAP2Q96G30 205 aa8.66□□□□□ -1.02
RAB11FIP3-202ENST00000412256 TMEM242Q9NWH2 141 aa8.66□□□□□ -1.02
RAB11FIP3-202ENST00000412256 TRBV6-5A0A0K0K1A5 114 aa8.65□□□□□ -1.02
RAB11FIP3-202ENST00000412256 TSHBP01222 138 aa8.65□□□□□ -1.02
RAB11FIP3-202ENST00000412256 ESDP10768 282 aa8.65□□□□□ -1.02
RAB11FIP3-202ENST00000412256 GAGE2BQ13066 116 aa8.65□□□□□ -1.02
RAB11FIP3-202ENST00000412256 SRSF9Q13242 221 aaKnown RBP eCLIP8.65□□□□□ -1.022e-10■□□□□ 8.3
RAB11FIP3-202ENST00000412256 CD164L2Q6UWJ8 174 aa8.65□□□□□ -1.02
RAB11FIP3-202ENST00000412256 BORCS7Q96B45 105 aa8.65□□□□□ -1.02
RAB11FIP3-202ENST00000412256 CDC42SE2Q9NRR3 84 aa8.65□□□□□ -1.02
RAB11FIP3-202ENST00000412256 MALP21145 153 aa8.64□□□□□ -1.03
RAB11FIP3-202ENST00000412256 CEBPGP53567 150 aa8.64□□□□□ -1.03
RAB11FIP3-202ENST00000412256 SLC51BQ86UW2 128 aa8.64□□□□□ -1.03
RAB11FIP3-202ENST00000412256 ZNF664Q8N3J9 261 aa8.64□□□□□ -1.03
RAB11FIP3-202ENST00000412256 CAMPP49913 170 aa8.63□□□□□ -1.03
RAB11FIP3-202ENST00000412256 PTTG1IPP53801 180 aa8.63□□□□□ -1.03
RAB11FIP3-202ENST00000412256 IGLV4-69A0A075B6H9 119 aa8.62□□□□□ -1.03
RAB11FIP3-202ENST00000412256 LOC107984640A0A0U1RRK4 108 aa8.62□□□□□ -1.03
RAB11FIP3-202ENST00000412256 FAM231DQ6ZW35 169 aa8.62□□□□□ -1.03
RAB11FIP3-202ENST00000412256 ISOC2Q96AB3 205 aa8.62□□□□□ -1.03
RAB11FIP3-202ENST00000412256 A0A1B0GUT8 65 aa8.61□□□□□ -1.03
RAB11FIP3-202ENST00000412256 C7orf77A4D0Y5 90 aa8.61□□□□□ -1.03
RAB11FIP3-202ENST00000412256 POLR2KP53803 58 aaKnown RBP8.61□□□□□ -1.03
RAB11FIP3-202ENST00000412256 MRPL52Q86TS9 123 aaKnown RBP8.61□□□□□ -1.03
RAB11FIP3-202ENST00000412256 FAM210AQ96ND0 272 aa8.61□□□□□ -1.03
RAB11FIP3-202ENST00000412256 TRBV27A0A0K0K1C4 114 aa8.6□□□□□ -1.03
RAB11FIP3-202ENST00000412256 A0A1W2PNN7 141 aa8.6□□□□□ -1.03
RAB11FIP3-202ENST00000412256 C1orf196B1AJZ1 125 aa8.6□□□□□ -1.03
RAB11FIP3-202ENST00000412256 TMEM250H0YL14 139 aa8.6□□□□□ -1.03
RAB11FIP3-202ENST00000412256 COX7A2LO14548 114 aa8.6□□□□□ -1.03
RAB11FIP3-202ENST00000412256 VCYO14598 125 aa8.6□□□□□ -1.03
RAB11FIP3-202ENST00000412256 RAB4AP20338 218 aa8.6□□□□□ -1.03
RAB11FIP3-202ENST00000412256 FCER1GP30273 86 aa8.6□□□□□ -1.03
RAB11FIP3-202ENST00000412256 CAMK2N2Q96S95 79 aa8.6□□□□□ -1.03
RAB11FIP3-202ENST00000412256 TMEM191AQ9H0A3 160 aa8.6□□□□□ -1.03
RAB11FIP3-202ENST00000412256 TRAV13-1A0A0B4J241 112 aa8.59□□□□□ -1.03
RAB11FIP3-202ENST00000412256 HIGD1CA8MV81 97 aa8.59□□□□□ -1.03
RAB11FIP3-202ENST00000412256 RNASE13Q5GAN3 156 aaKnown RBP8.59□□□□□ -1.03
RAB11FIP3-202ENST00000412256 CT83Q5H943 113 aa8.59□□□□□ -1.03
RAB11FIP3-202ENST00000412256 AMN1Q8IY45 258 aa8.59□□□□□ -1.03
RAB11FIP3-202ENST00000412256 TCTE3Q8IZS6 198 aa8.59□□□□□ -1.03
RAB11FIP3-202ENST00000412256 SMKR1H3BMG3 65 aa8.58□□□□□ -1.04
RAB11FIP3-202ENST00000412256 MT-ND6P03923 174 aa8.58□□□□□ -1.04
RAB11FIP3-202ENST00000412256 BLOC1S1P78537 153 aa8.58□□□□□ -1.04
RAB11FIP3-202ENST00000412256 C5orf38Q86SI9 138 aa8.58□□□□□ -1.04
RAB11FIP3-202ENST00000412256 NUP35Q8NFH5 326 aa8.58□□□□□ -1.04
RAB11FIP3-202ENST00000412256 TSKUQ8WUA8 353 aa8.58□□□□□ -1.04
RAB11FIP3-202ENST00000412256 APOMO95445 188 aa8.57□□□□□ -1.04
RAB11FIP3-202ENST00000412256 RPL18AQ02543 176 aaKnown RBP8.57□□□□□ -1.04
RAB11FIP3-202ENST00000412256 SMAGPQ0VAQ4 97 aa8.57□□□□□ -1.04
RAB11FIP3-202ENST00000412256 C9orf116Q5BN46 136 aaPredicted RBP8.57□□□□□ -1.04
RAB11FIP3-202ENST00000412256 OPRPNQ99935 248 aaPredicted RBP8.57□□□□□ -1.04
RAB11FIP3-202ENST00000412256 PSORS1C2Q9UIG4 136 aa8.57□□□□□ -1.04
RAB11FIP3-202ENST00000412256 ALKAL2Q6UX46 152 aa8.56□□□□□ -1.04
RAB11FIP3-202ENST00000412256 KIR2DL4Q99706 377 aa8.56□□□□□ -1.04
RAB11FIP3-202ENST00000412256 SMIM7Q9BQ49 75 aa8.56□□□□□ -1.04
RAB11FIP3-202ENST00000412256 EIF5A2Q9GZV4 153 aaKnown RBP8.56□□□□□ -1.04
RAB11FIP3-202ENST00000412256 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.55□□□□□ -1.04
RAB11FIP3-202ENST00000412256 RIGQ13278 110 aa8.55□□□□□ -1.04
RAB11FIP3-202ENST00000412256 C1orf137Q5JT78 98 aa8.55□□□□□ -1.04
RAB11FIP3-202ENST00000412256 PHF5AQ7RTV0 110 aaKnown RBP8.55□□□□□ -1.04
RAB11FIP3-202ENST00000412256 C2orf48Q96LS8 159 aa8.55□□□□□ -1.04
RAB11FIP3-202ENST00000412256 UBE2D4Q9Y2X8 147 aa8.55□□□□□ -1.04
RAB11FIP3-202ENST00000412256 CSDC2Q9Y534 153 aaKnown RBP8.55□□□□□ -1.04
RAB11FIP3-202ENST00000412256 PPP1R17O96001 155 aa8.54□□□□□ -1.04
RAB11FIP3-202ENST00000412256 SUMO2P61956 95 aaKnown RBP8.54□□□□□ -1.04
RAB11FIP3-202ENST00000412256 LINC01551Q86U37 167 aa8.54□□□□□ -1.04
RAB11FIP3-202ENST00000412256 OSTCQ9NRP0 149 aa8.54□□□□□ -1.04
RAB11FIP3-202ENST00000412256 ZNF727A8MUV8 499 aa8.53□□□□□ -1.04
RAB11FIP3-202ENST00000412256 SPAG11BQ08648 103 aa8.53□□□□□ -1.04
RAB11FIP3-202ENST00000412256 NRACQ8N912 160 aa8.53□□□□□ -1.04
RAB11FIP3-202ENST00000412256 TMEM18Q96B42 140 aa8.53□□□□□ -1.04
RAB11FIP3-202ENST00000412256 Q6ZUT4 128 aa8.52□□□□□ -1.05
RAB11FIP3-202ENST00000412256 A0A087WZ39 114 aa8.51□□□□□ -1.05
RAB11FIP3-202ENST00000412256 V9GYV3 84 aa8.51□□□□□ -1.05
RAB11FIP3-202ENST00000412256 PPP1R2P9O14990 202 aa8.5□□□□□ -1.05
RAB11FIP3-202ENST00000412256 RNF151Q2KHN1 245 aa8.5□□□□□ -1.05
RAB11FIP3-202ENST00000412256 MRPL51Q4U2R6 128 aaKnown RBP8.5□□□□□ -1.05
RAB11FIP3-202ENST00000412256 PRR26Q8N8Z3 221 aa8.5□□□□□ -1.05
RAB11FIP3-202ENST00000412256 ORAOV1Q8WV07 137 aa8.5□□□□□ -1.05
RAB11FIP3-202ENST00000412256 DIRC1Q969H9 104 aa8.5□□□□□ -1.05
RAB11FIP3-202ENST00000412256 IMMP2LQ96T52 175 aa8.5□□□□□ -1.05
RAB11FIP3-202ENST00000412256 TIMM21Q9BVV7 248 aa8.5□□□□□ -1.05
RAB11FIP3-202ENST00000412256 IGLV7-43P04211 117 aa8.49□□□□□ -1.05
RAB11FIP3-202ENST00000412256 SRP19P09132 144 aaKnown RBP8.49□□□□□ -1.05
RAB11FIP3-202ENST00000412256 FAM104BQ5XKR9 115 aa8.49□□□□□ -1.05
RAB11FIP3-202ENST00000412256 OR10D4PQ8NGN7 298 aa8.49□□□□□ -1.05
RAB11FIP3-202ENST00000412256 NAT8BQ9UHF3 227 aa8.49□□□□□ -1.05
RAB11FIP3-202ENST00000412256 FAM168BA1KXE4 195 aa8.48□□□□□ -1.05
RAB11FIP3-202ENST00000412256 CKS2P33552 79 aa8.48□□□□□ -1.05
RAB11FIP3-202ENST00000412256 RPL39P62891 51 aaKnown RBP8.48□□□□□ -1.05
RAB11FIP3-202ENST00000412256 TMEM241Q24JQ0 296 aa8.48□□□□□ -1.05
RAB11FIP3-202ENST00000412256 C20orf78Q9BR46 151 aa8.48□□□□□ -1.05
RAB11FIP3-202ENST00000412256 MRPL35Q9NZE8 188 aaKnown RBP8.48□□□□□ -1.05
RAB11FIP3-202ENST00000412256 LINC00862A6NCI5 91 aa8.47□□□□□ -1.05
RAB11FIP3-202ENST00000412256 NDUFA1O15239 70 aa8.47□□□□□ -1.05
RAB11FIP3-202ENST00000412256 GAGE2EQ4V326 116 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms