RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 CARD19Q96LW7 228 aa10.39□□□□□ -0.75
DDR1-229ENST00000396342 LINC00959A0A1B0GUT2 108 aa10.38□□□□□ -0.75
DDR1-229ENST00000396342 C7orf77A4D0Y5 90 aa10.38□□□□□ -0.75
DDR1-229ENST00000396342 FAM231BA6NCW3 169 aa10.38□□□□□ -0.75
DDR1-229ENST00000396342 HIGD1CA8MV81 97 aa10.38□□□□□ -0.75
DDR1-229ENST00000396342 FOXA3P55318 350 aaPredicted RBP10.38□□□□□ -0.75
DDR1-229ENST00000396342 PRSS3P2Q8NHM4 247 aa10.38□□□□□ -0.75
DDR1-229ENST00000396342 KIR2DL4Q99706 377 aa10.38□□□□□ -0.75
DDR1-229ENST00000396342 TMEM191AQ9H0A3 160 aa10.38□□□□□ -0.75
DDR1-229ENST00000396342 TMEM242Q9NWH2 141 aa10.38□□□□□ -0.75
DDR1-229ENST00000396342 ZNF727A8MUV8 499 aa10.37□□□□□ -0.75
DDR1-229ENST00000396342 VCYO14598 125 aa10.37□□□□□ -0.75
DDR1-229ENST00000396342 FOXI1Q12951 378 aa10.37□□□□□ -0.75
DDR1-229ENST00000396342 C1orf196B1AJZ1 125 aa10.36□□□□□ -0.75
DDR1-229ENST00000396342 SYCNQ0VAF6 134 aa10.36□□□□□ -0.75
DDR1-229ENST00000396342 REG3GQ6UW15 175 aa10.36□□□□□ -0.75
DDR1-229ENST00000396342 CD164L2Q6UWJ8 174 aa10.36□□□□□ -0.75
DDR1-229ENST00000396342 ZNF664Q8N3J9 261 aa10.36□□□□□ -0.75
DDR1-229ENST00000396342 PPP1R2P9O14990 202 aa10.35□□□□□ -0.75
DDR1-229ENST00000396342 OSTCQ9NRP0 149 aa10.35□□□□□ -0.75
DDR1-229ENST00000396342 COX7A2LO14548 114 aa10.34□□□□□ -0.75
DDR1-229ENST00000396342 TCAPO15273 167 aa10.34□□□□□ -0.75
DDR1-229ENST00000396342 APOMO95445 188 aa10.34□□□□□ -0.75
DDR1-229ENST00000396342 TSHBP01222 138 aa10.34□□□□□ -0.75
DDR1-229ENST00000396342 MRPL52Q86TS9 123 aaKnown RBP10.34□□□□□ -0.75
DDR1-229ENST00000396342 TRBV27A0A0K0K1C4 114 aa10.33□□□□□ -0.76
DDR1-229ENST00000396342 ESDP10768 282 aa10.33□□□□□ -0.76
DDR1-229ENST00000396342 RAB4AP20338 218 aa10.33□□□□□ -0.76
DDR1-229ENST00000396342 CAMPP49913 170 aa10.33□□□□□ -0.76
DDR1-229ENST00000396342 PRR3P79522 188 aaKnown RBP10.33□□□□□ -0.76
DDR1-229ENST00000396342 LINC01551Q86U37 167 aa10.33□□□□□ -0.76
DDR1-229ENST00000396342 CDC42SE2Q9NRR3 84 aa10.33□□□□□ -0.76
DDR1-229ENST00000396342 A0A096LNI7 61 aa10.32□□□□□ -0.76
DDR1-229ENST00000396342 LOC107984640A0A0U1RRK4 108 aa10.32□□□□□ -0.76
DDR1-229ENST00000396342 FAM74A3Q4VXF1 159 aa10.32□□□□□ -0.76
DDR1-229ENST00000396342 Q6ZRP5 223 aa10.32□□□□□ -0.76
DDR1-229ENST00000396342 AMN1Q8IY45 258 aa10.32□□□□□ -0.76
DDR1-229ENST00000396342 NAT8BQ9UHF3 227 aa10.32□□□□□ -0.76
DDR1-229ENST00000396342 GAGE2BQ13066 116 aa10.31□□□□□ -0.76
DDR1-229ENST00000396342 TMEM241Q24JQ0 296 aa10.31□□□□□ -0.76
DDR1-229ENST00000396342 CAMK2N2Q96S95 79 aa10.31□□□□□ -0.76
DDR1-229ENST00000396342 hCG_2014768A0A024R1R8 64 aa10.3□□□□□ -0.76
DDR1-229ENST00000396342 IGLV4-69A0A075B6H9 119 aa10.3□□□□□ -0.76
DDR1-229ENST00000396342 S100A8P05109 93 aa10.3□□□□□ -0.76
DDR1-229ENST00000396342 POLR2KP53803 58 aaKnown RBP10.3□□□□□ -0.76
DDR1-229ENST00000396342 SUMO2P61956 95 aaKnown RBP10.3□□□□□ -0.76
DDR1-229ENST00000396342 SPINK6Q6UWN8 80 aa10.3□□□□□ -0.76
DDR1-229ENST00000396342 TRAV13-1A0A0B4J241 112 aa10.29□□□□□ -0.76
DDR1-229ENST00000396342 A0A1B0GW15 77 aa10.29□□□□□ -0.76
DDR1-229ENST00000396342 CSDC2Q9Y534 153 aaKnown RBP10.29□□□□□ -0.76
DDR1-229ENST00000396342 CKS2P33552 79 aa10.28□□□□□ -0.76
DDR1-229ENST00000396342 LINC00526Q96FQ7 95 aa10.28□□□□□ -0.76
DDR1-229ENST00000396342 LINC00862A6NCI5 91 aa10.27□□□□□ -0.77
DDR1-229ENST00000396342 F8W036 122 aa10.27□□□□□ -0.77
DDR1-229ENST00000396342 MT1HL1P0DM35 61 aa10.27□□□□□ -0.77
DDR1-229ENST00000396342 ADIRFQ15847 76 aa10.27□□□□□ -0.77
DDR1-229ENST00000396342 NUP35Q8NFH5 326 aa10.27□□□□□ -0.77
DDR1-229ENST00000396342 LINC01600Q96MT4 127 aa10.27□□□□□ -0.77
DDR1-229ENST00000396342 SMKR1H3BMG3 65 aa10.26□□□□□ -0.77
DDR1-229ENST00000396342 PTTG1IPP53801 180 aa10.26□□□□□ -0.77
DDR1-229ENST00000396342 C2orf48Q96LS8 159 aa10.26□□□□□ -0.77
DDR1-229ENST00000396342 C20orf78Q9BR46 151 aa10.26□□□□□ -0.77
DDR1-229ENST00000396342 GAS8-AS1O95177 125 aa10.25□□□□□ -0.77
DDR1-229ENST00000396342 MT-ND6P03923 174 aa10.25□□□□□ -0.77
DDR1-229ENST00000396342 SRP19P09132 144 aaKnown RBP10.25□□□□□ -0.77
DDR1-229ENST00000396342 RPL18AQ02543 176 aaKnown RBP10.25□□□□□ -0.77
DDR1-229ENST00000396342 PEA15Q15121 130 aa10.25□□□□□ -0.77
DDR1-229ENST00000396342 TIMM21Q9BVV7 248 aa10.25□□□□□ -0.77
DDR1-229ENST00000396342 UBE2D4Q9Y2X8 147 aa10.25□□□□□ -0.77
DDR1-229ENST00000396342 V9GYV3 84 aa10.25□□□□□ -0.77
DDR1-229ENST00000396342 FAM104BQ5XKR9 115 aa10.24□□□□□ -0.77
DDR1-229ENST00000396342 NAT8Q9UHE5 227 aa10.24□□□□□ -0.77
DDR1-229ENST00000396342 LRP1Q07954 4544 aaKnown RBP10.23□□□□□ -0.77
DDR1-229ENST00000396342 F8WDY8 70 aa10.23□□□□□ -0.77
DDR1-229ENST00000396342 RAB5AP20339 215 aa10.23□□□□□ -0.77
DDR1-229ENST00000396342 SPAG11BQ08648 103 aa10.23□□□□□ -0.77
DDR1-229ENST00000396342 RNASE13Q5GAN3 156 aaKnown RBP10.23□□□□□ -0.77
DDR1-229ENST00000396342 C5orf38Q86SI9 138 aa10.23□□□□□ -0.77
DDR1-229ENST00000396342 OR10D4PQ8NGN7 298 aa10.23□□□□□ -0.77
DDR1-229ENST00000396342 IMMP2LQ96T52 175 aa10.23□□□□□ -0.77
DDR1-229ENST00000396342 A0A0J9YXV3 536 aa10.22□□□□□ -0.77
DDR1-229ENST00000396342 SPANXA1Q9NS26 97 aa10.22□□□□□ -0.77
DDR1-229ENST00000396342 HBBP68871 147 aa10.21□□□□□ -0.77
DDR1-229ENST00000396342 MRPL51Q4U2R6 128 aaKnown RBP10.21□□□□□ -0.77
DDR1-229ENST00000396342 NRACQ8N912 160 aa10.21□□□□□ -0.77
DDR1-229ENST00000396342 TGIF2-C20orf24A0A0A6YYL0 155 aa10.2□□□□□ -0.78
DDR1-229ENST00000396342 PPBPP02775 128 aa10.2□□□□□ -0.78
DDR1-229ENST00000396342 RPL23P62829 140 aaKnown RBP10.2□□□□□ -0.78
DDR1-229ENST00000396342 RPL32P62910 135 aaKnown RBP10.2□□□□□ -0.78
DDR1-229ENST00000396342 RNF151Q2KHN1 245 aa10.2□□□□□ -0.78
DDR1-229ENST00000396342 Q6ZUT4 128 aa10.2□□□□□ -0.78
DDR1-229ENST00000396342 ORAOV1Q8WV07 137 aa10.2□□□□□ -0.78
DDR1-229ENST00000396342 SMIM27A0A1W2PRY6 76 aa10.19□□□□□ -0.78
DDR1-229ENST00000396342 IFITM10A6NMD0 228 aa10.19□□□□□ -0.78
DDR1-229ENST00000396342 NDUFA1O15239 70 aa10.19□□□□□ -0.78
DDR1-229ENST00000396342 TNFRSF6BO95407 300 aa10.19□□□□□ -0.78
DDR1-229ENST00000396342 SMDT1Q9H4I9 107 aa10.19□□□□□ -0.78
DDR1-229ENST00000396342 HMCN2Q8NDA2 5059 aa10.19□□□□□ -0.78
DDR1-229ENST00000396342 TRBV24-1A0A075B6N3 115 aa10.18□□□□□ -0.78
DDR1-229ENST00000396342 IFI27P40305 119 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms