RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 ESDP10768 282 aa12.02□□□□□ -0.49
COL11A2-204ENST00000395194 ALKAL2Q6UX46 152 aa12.02□□□□□ -0.49
COL11A2-204ENST00000395194 FAM231DQ6ZW35 169 aa12.02□□□□□ -0.49
COL11A2-204ENST00000395194 BORCS7Q96B45 105 aa12.02□□□□□ -0.49
COL11A2-204ENST00000395194 LINC01600Q96MT4 127 aa12.01□□□□□ -0.49
COL11A2-204ENST00000395194 SS18Q15532 418 aa12□□□□□ -0.49
COL11A2-204ENST00000395194 A0A1B0GVG6 124 aa11.99□□□□□ -0.49
COL11A2-204ENST00000395194 HIGD1CA8MV81 97 aa11.99□□□□□ -0.49
COL11A2-204ENST00000395194 SMKR1H3BMG3 65 aa11.99□□□□□ -0.49
COL11A2-204ENST00000395194 ZNF561-AS1K7EIQ3 104 aa11.99□□□□□ -0.49
COL11A2-204ENST00000395194 CDC42SE2Q9NRR3 84 aa11.99□□□□□ -0.49
COL11A2-204ENST00000395194 A0A1B0GUT8 65 aa11.98□□□□□ -0.49
COL11A2-204ENST00000395194 C7orf77A4D0Y5 90 aa11.98□□□□□ -0.49
COL11A2-204ENST00000395194 POLR2KP53803 58 aaKnown RBP11.98□□□□□ -0.49
COL11A2-204ENST00000395194 BLOC1S1P78537 153 aa11.98□□□□□ -0.49
COL11A2-204ENST00000395194 SYCNQ0VAF6 134 aa11.98□□□□□ -0.49
COL11A2-204ENST00000395194 RNASE13Q5GAN3 156 aaKnown RBP11.98□□□□□ -0.49
COL11A2-204ENST00000395194 CT83Q5H943 113 aa11.98□□□□□ -0.49
COL11A2-204ENST00000395194 CD164L2Q6UWJ8 174 aa11.98□□□□□ -0.49
COL11A2-204ENST00000395194 AMN1Q8IY45 258 aa11.98□□□□□ -0.49
COL11A2-204ENST00000395194 SMIM7Q9BQ49 75 aa11.98□□□□□ -0.49
COL11A2-204ENST00000395194 TMEM191AQ9H0A3 160 aa11.98□□□□□ -0.49
COL11A2-204ENST00000395194 LINC00474Q9P2X8 69 aa11.98□□□□□ -0.49
COL11A2-204ENST00000395194 RAB4AP20338 218 aa11.97□□□□□ -0.49
COL11A2-204ENST00000395194 ZNF664Q8N3J9 261 aa11.97□□□□□ -0.49
COL11A2-204ENST00000395194 CAMPP49913 170 aa11.96□□□□□ -0.49
COL11A2-204ENST00000395194 GAGE2BQ13066 116 aa11.96□□□□□ -0.49
COL11A2-204ENST00000395194 MRPL52Q86TS9 123 aaKnown RBP11.96□□□□□ -0.49
COL11A2-204ENST00000395194 TSKUQ8WUA8 353 aa11.96□□□□□ -0.49
COL11A2-204ENST00000395194 PKIGQ9Y2B9 76 aa11.96□□□□□ -0.49
COL11A2-204ENST00000395194 IGLV4-69A0A075B6H9 119 aa11.95□□□□□ -0.5
COL11A2-204ENST00000395194 A0A0J9YXV3 536 aa11.95□□□□□ -0.5
COL11A2-204ENST00000395194 TRBV27A0A0K0K1C4 114 aa11.95□□□□□ -0.5
COL11A2-204ENST00000395194 LINC01551Q86U37 167 aa11.95□□□□□ -0.5
COL11A2-204ENST00000395194 EIF5A2Q9GZV4 153 aaKnown RBP11.95□□□□□ -0.5
COL11A2-204ENST00000395194 MALP21145 153 aa11.94□□□□□ -0.5
COL11A2-204ENST00000395194 FCER1GP30273 86 aa11.94□□□□□ -0.5
COL11A2-204ENST00000395194 PTTG1IPP53801 180 aa11.94□□□□□ -0.5
COL11A2-204ENST00000395194 SPINK6Q6UWN8 80 aa11.94□□□□□ -0.5
COL11A2-204ENST00000395194 REG3GQ6UW15 175 aa11.93□□□□□ -0.5
COL11A2-204ENST00000395194 Q6ZRP5 223 aa11.93□□□□□ -0.5
COL11A2-204ENST00000395194 TRAV13-1A0A0B4J241 112 aa11.92□□□□□ -0.5
COL11A2-204ENST00000395194 LOC107984640A0A0U1RRK4 108 aa11.92□□□□□ -0.5
COL11A2-204ENST00000395194 ZNF727A8MUV8 499 aa11.92□□□□□ -0.5
COL11A2-204ENST00000395194 COX7A2LO14548 114 aa11.92□□□□□ -0.5
COL11A2-204ENST00000395194 OSTCQ9NRP0 149 aa11.92□□□□□ -0.5
COL11A2-204ENST00000395194 RNF213Q63HN8 5207 aa11.92□□□□□ -0.5
COL11A2-204ENST00000395194 ISOC2Q96AB3 205 aa11.91□□□□□ -0.5
COL11A2-204ENST00000395194 CAMK2N2Q96S95 79 aa11.91□□□□□ -0.5
COL11A2-204ENST00000395194 UBE2D4Q9Y2X8 147 aa11.91□□□□□ -0.5
COL11A2-204ENST00000395194 A0A1W2PNN7 141 aa11.9□□□□□ -0.5
COL11A2-204ENST00000395194 C1orf196B1AJZ1 125 aa11.9□□□□□ -0.5
COL11A2-204ENST00000395194 VCYO14598 125 aa11.9□□□□□ -0.5
COL11A2-204ENST00000395194 SRSF9Q13242 221 aaKnown RBP eCLIP11.9□□□□□ -0.5
COL11A2-204ENST00000395194 Q6ZUT4 128 aa11.9□□□□□ -0.5
COL11A2-204ENST00000395194 C5orf38Q86SI9 138 aa11.9□□□□□ -0.5
COL11A2-204ENST00000395194 NRACQ8N912 160 aa11.9□□□□□ -0.5
COL11A2-204ENST00000395194 NUP35Q8NFH5 326 aa11.9□□□□□ -0.5
COL11A2-204ENST00000395194 V9GYV3 84 aa11.9□□□□□ -0.5
COL11A2-204ENST00000395194 KRTAP10-8P60410 259 aa11.89□□□□□ -0.51
COL11A2-204ENST00000395194 SUMO2P61956 95 aaKnown RBP11.89□□□□□ -0.51
COL11A2-204ENST00000395194 RPL18AQ02543 176 aaKnown RBP11.89□□□□□ -0.51
COL11A2-204ENST00000395194 RIGQ13278 110 aa11.89□□□□□ -0.51
COL11A2-204ENST00000395194 FAM210AQ96ND0 272 aa11.89□□□□□ -0.51
COL11A2-204ENST00000395194 SRP19P09132 144 aaKnown RBP11.88□□□□□ -0.51
COL11A2-204ENST00000395194 KIR2DL4Q99706 377 aa11.87□□□□□ -0.51
COL11A2-204ENST00000395194 OPRPNQ99935 248 aaPredicted RBP11.87□□□□□ -0.51
COL11A2-204ENST00000395194 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.86□□□□□ -0.51
COL11A2-204ENST00000395194 APOMO95445 188 aa11.86□□□□□ -0.51
COL11A2-204ENST00000395194 MRPL51Q4U2R6 128 aaKnown RBP11.86□□□□□ -0.51
COL11A2-204ENST00000395194 C9orf116Q5BN46 136 aaPredicted RBP11.86□□□□□ -0.51
COL11A2-204ENST00000395194 SPAG11BQ08648 103 aa11.85□□□□□ -0.51
COL11A2-204ENST00000395194 SMAGPQ0VAQ4 97 aa11.85□□□□□ -0.51
COL11A2-204ENST00000395194 PSORS1C2Q9UIG4 136 aa11.85□□□□□ -0.51
COL11A2-204ENST00000395194 CSDC2Q9Y534 153 aaKnown RBP11.85□□□□□ -0.51
COL11A2-204ENST00000395194 PPP1R17O96001 155 aa11.84□□□□□ -0.51
COL11A2-204ENST00000395194 RPL39P62891 51 aaKnown RBP11.84□□□□□ -0.51
COL11A2-204ENST00000395194 PHF5AQ7RTV0 110 aaKnown RBP11.84□□□□□ -0.51
COL11A2-204ENST00000395194 NAT8BQ9UHF3 227 aa11.84□□□□□ -0.51
COL11A2-204ENST00000395194 MT-ND6P03923 174 aa11.83□□□□□ -0.52
COL11A2-204ENST00000395194 ADIRFQ15847 76 aa11.83□□□□□ -0.52
COL11A2-204ENST00000395194 FAM104BQ5XKR9 115 aa11.83□□□□□ -0.52
COL11A2-204ENST00000395194 C2orf48Q96LS8 159 aa11.83□□□□□ -0.52
COL11A2-204ENST00000395194 PPP1R2P9O14990 202 aa11.82□□□□□ -0.52
COL11A2-204ENST00000395194 RPL23P62829 140 aaKnown RBP11.82□□□□□ -0.52
COL11A2-204ENST00000395194 TMEM241Q24JQ0 296 aa11.81□□□□□ -0.52
COL11A2-204ENST00000395194 C1orf137Q5JT78 98 aa11.81□□□□□ -0.52
COL11A2-204ENST00000395194 ORAOV1Q8WV07 137 aa11.81□□□□□ -0.52
COL11A2-204ENST00000395194 TMEM18Q96B42 140 aa11.81□□□□□ -0.52
COL11A2-204ENST00000395194 LPAP08519 4548 aa11.8□□□□□ -0.52
COL11A2-204ENST00000395194 CKS2P33552 79 aa11.8□□□□□ -0.52
COL11A2-204ENST00000395194 FAM74A3Q4VXF1 159 aa11.8□□□□□ -0.52
COL11A2-204ENST00000395194 TIMM21Q9BVV7 248 aa11.8□□□□□ -0.52
COL11A2-204ENST00000395194 TNFRSF6BO95407 300 aa11.78□□□□□ -0.52
COL11A2-204ENST00000395194 FAM104AQ969W3 186 aa11.78□□□□□ -0.52
COL11A2-204ENST00000395194 C20orf78Q9BR46 151 aa11.78□□□□□ -0.52
COL11A2-204ENST00000395194 SMIM27A0A1W2PRY6 76 aa11.77□□□□□ -0.53
COL11A2-204ENST00000395194 C9JQL5 133 aa11.77□□□□□ -0.53
COL11A2-204ENST00000395194 C10orf25Q5T742 122 aa11.77□□□□□ -0.53
COL11A2-204ENST00000395194 MRPL54Q6P161 138 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms