RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 ARHGEF12Q9NZN5 1544 aa-0.34□□□□□ -2.46
RNU6-440P-201ENST00000390882 C2CD3Q4AC94 2353 aa-0.34□□□□□ -2.46
RNU6-440P-201ENST00000390882 CPSF1Q10570 1443 aaKnown RBP-0.35□□□□□ -2.47
RNU6-440P-201ENST00000390882 FOCADQ5VW36 1801 aa-0.35□□□□□ -2.47
RNU6-440P-201ENST00000390882 F8VRH5 84 aa-0.35□□□□□ -2.47
RNU6-440P-201ENST00000390882 COX6B1P14854 86 aa-0.35□□□□□ -2.47
RNU6-440P-201ENST00000390882 ARL11Q969Q4 196 aa-0.35□□□□□ -2.47
RNU6-440P-201ENST00000390882 MGST2Q99735 147 aa-0.35□□□□□ -2.47
RNU6-440P-201ENST00000390882 SNRNP25Q9BV90 132 aaKnown RBP-0.35□□□□□ -2.47
RNU6-440P-201ENST00000390882 NAA60Q9H7X0 242 aa-0.35□□□□□ -2.47
RNU6-440P-201ENST00000390882 LINC00472Q9H8W2 130 aa-0.35□□□□□ -2.47
RNU6-440P-201ENST00000390882 DYNLRB1Q9NP97 96 aa-0.35□□□□□ -2.47
RNU6-440P-201ENST00000390882 STAB1Q9NY15 2570 aa-0.35□□□□□ -2.47
RNU6-440P-201ENST00000390882 SHANK2Q9UPX8 1470 aa-0.35□□□□□ -2.47
RNU6-440P-201ENST00000390882 MUC2Q02817 5179 aa-0.35□□□□□ -2.47
RNU6-440P-201ENST00000390882 FSIP2Q5CZC0 6907 aa-0.36□□□□□ -2.47
RNU6-440P-201ENST00000390882 MIF4GDA9UHW6 222 aaKnown RBP-0.36□□□□□ -2.47
RNU6-440P-201ENST00000390882 TNFP01375 233 aa-0.36□□□□□ -2.47
RNU6-440P-201ENST00000390882 GAPVD1Q14C86 1478 aa-0.36□□□□□ -2.47
RNU6-440P-201ENST00000390882 MBD5Q9P267 1494 aa-0.36□□□□□ -2.47
RNU6-440P-201ENST00000390882 CHD9Q3L8U1 2897 aa-0.36□□□□□ -2.47
RNU6-440P-201ENST00000390882 MYH7P12883 1935 aa-0.36□□□□□ -2.47
RNU6-440P-201ENST00000390882 ARHGEF5Q12774 1597 aa-0.36□□□□□ -2.47
RNU6-440P-201ENST00000390882 QRICH2Q9H0J4 1663 aa-0.37□□□□□ -2.47
RNU6-440P-201ENST00000390882 NAIPQ13075 1403 aa-0.37□□□□□ -2.47
RNU6-440P-201ENST00000390882 TRBV7-3A0A075B6L6 115 aa-0.37□□□□□ -2.47
RNU6-440P-201ENST00000390882 LOC285095A0A1B0GVY8 99 aa-0.37□□□□□ -2.47
RNU6-440P-201ENST00000390882 IGLC7A0M8Q6 106 aa-0.37□□□□□ -2.47
RNU6-440P-201ENST00000390882 FAM25AB3EWG3 89 aa-0.37□□□□□ -2.47
RNU6-440P-201ENST00000390882 FAM25CB3EWG5 89 aa-0.37□□□□□ -2.47
RNU6-440P-201ENST00000390882 FAM25GB3EWG6 89 aa-0.37□□□□□ -2.47
RNU6-440P-201ENST00000390882 LOC730098B7Z3J9 87 aa-0.37□□□□□ -2.47
RNU6-440P-201ENST00000390882 HMGN4O00479 90 aa-0.37□□□□□ -2.47
RNU6-440P-201ENST00000390882 SPRR1BP22528 89 aa-0.37□□□□□ -2.47
RNU6-440P-201ENST00000390882 KRTAP19-7Q3SYF9 63 aa-0.37□□□□□ -2.47
RNU6-440P-201ENST00000390882 PPP3R2Q96LZ3 170 aa-0.37□□□□□ -2.47
RNU6-440P-201ENST00000390882 LINC00470Q9BZP3 86 aa-0.37□□□□□ -2.47
RNU6-440P-201ENST00000390882 PSME4Q14997 1843 aa-0.37□□□□□ -2.47
RNU6-440P-201ENST00000390882 PI4KAP42356 2102 aa-0.37□□□□□ -2.47
RNU6-440P-201ENST00000390882 MYO7BQ6PIF6 2116 aa-0.37□□□□□ -2.47
RNU6-440P-201ENST00000390882 USF3Q68DE3 2245 aa-0.37□□□□□ -2.47
RNU6-440P-201ENST00000390882 PLCE1Q9P212 2302 aa-0.37□□□□□ -2.47
RNU6-440P-201ENST00000390882 BTAF1O14981 1849 aa-0.38□□□□□ -2.47
RNU6-440P-201ENST00000390882 TCHHQ07283 1943 aa-0.38□□□□□ -2.47
RNU6-440P-201ENST00000390882 HECTD4Q9Y4D8 3996 aa-0.38□□□□□ -2.47
RNU6-440P-201ENST00000390882 SELENOWP63302 87 aa-0.38□□□□□ -2.47
RNU6-440P-201ENST00000390882 BTG2P78543 158 aa-0.38□□□□□ -2.47
RNU6-440P-201ENST00000390882 MEIG1Q5JSS6 88 aa-0.38□□□□□ -2.47
RNU6-440P-201ENST00000390882 DEFB123Q8N688 67 aa-0.38□□□□□ -2.47
RNU6-440P-201ENST00000390882 TSLPQ969D9 159 aa-0.38□□□□□ -2.47
RNU6-440P-201ENST00000390882 LINC01558Q9Y6Z2 57 aa-0.38□□□□□ -2.47
RNU6-440P-201ENST00000390882 POLA1P09884 1462 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-440P-201ENST00000390882 ROBO1Q9Y6N7 1651 aa-0.38□□□□□ -2.47
RNU6-440P-201ENST00000390882 NSD1Q96L73 2696 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-440P-201ENST00000390882 KIAA0556O60303 1618 aa-0.38□□□□□ -2.47
RNU6-440P-201ENST00000390882 TULP4Q9NRJ4 1543 aa-0.38□□□□□ -2.47
RNU6-440P-201ENST00000390882 SMG6Q86US8 1419 aaKnown RBP-0.38□□□□□ -2.47
RNU6-440P-201ENST00000390882 VWFP04275 2813 aa-0.39□□□□□ -2.47
RNU6-440P-201ENST00000390882 TET3O43151 1660 aa-0.39□□□□□ -2.47
RNU6-440P-201ENST00000390882 CUL7Q14999 1698 aa-0.39□□□□□ -2.47
RNU6-440P-201ENST00000390882 MAGI1Q96QZ7 1491 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-440P-201ENST00000390882 SSSCA1O60232 199 aa-0.39□□□□□ -2.47
RNU6-440P-201ENST00000390882 GNG7O60262 68 aa-0.39□□□□□ -2.47
RNU6-440P-201ENST00000390882 SFT2D2O95562 160 aa-0.39□□□□□ -2.47
RNU6-440P-201ENST00000390882 MGPP08493 103 aa-0.39□□□□□ -2.47
RNU6-440P-201ENST00000390882 CATR1Q13166 79 aa-0.39□□□□□ -2.47
RNU6-440P-201ENST00000390882 Q56UQ5 140 aa-0.39□□□□□ -2.47
RNU6-440P-201ENST00000390882 COMMD6Q7Z4G1 85 aa-0.39□□□□□ -2.47
RNU6-440P-201ENST00000390882 C8orf59Q8N0T1 100 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-440P-201ENST00000390882 SPANXDQ9BXN6 97 aa-0.39□□□□□ -2.47
RNU6-440P-201ENST00000390882 FXYD6Q9H0Q3 95 aa-0.39□□□□□ -2.47
RNU6-440P-201ENST00000390882 NSD3Q9BZ95 1437 aa-0.39□□□□□ -2.47
RNU6-440P-201ENST00000390882 SCN7AQ01118 1682 aa-0.4□□□□□ -2.47
RNU6-440P-201ENST00000390882 IQSEC2Q5JU85 1478 aa-0.4□□□□□ -2.47
RNU6-440P-201ENST00000390882 ZNF292O60281 2723 aa-0.4□□□□□ -2.47
RNU6-440P-201ENST00000390882 BSNQ9UPA5 3926 aa-0.4□□□□□ -2.47
RNU6-440P-201ENST00000390882 SPINK4O60575 86 aa-0.4□□□□□ -2.47
RNU6-440P-201ENST00000390882 APOC2P02655 101 aa-0.4□□□□□ -2.47
RNU6-440P-201ENST00000390882 CCDC58Q4VC31 144 aa-0.4□□□□□ -2.47
RNU6-440P-201ENST00000390882 C5orf38Q86SI9 138 aa-0.4□□□□□ -2.47
RNU6-440P-201ENST00000390882 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-440P-201ENST00000390882 MYOZ3Q8TDC0 251 aa-0.4□□□□□ -2.47
RNU6-440P-201ENST00000390882 FAIMQ9NVQ4 179 aa-0.4□□□□□ -2.47
RNU6-440P-201ENST00000390882 EHBP1L1Q8N3D4 1523 aa-0.4□□□□□ -2.47
RNU6-440P-201ENST00000390882 CSPG4Q6UVK1 2322 aa-0.41□□□□□ -2.47
RNU6-440P-201ENST00000390882 A2ML1A8K2U0 1454 aa-0.41□□□□□ -2.47
RNU6-440P-201ENST00000390882 SPTBN1Q01082 2364 aaKnown RBP-0.41□□□□□ -2.47
RNU6-440P-201ENST00000390882 KTN1Q86UP2 1357 aaKnown RBP-0.41□□□□□ -2.47
RNU6-440P-201ENST00000390882 TRBV7-4A0A0J9YYF1 115 aa-0.41□□□□□ -2.48
RNU6-440P-201ENST00000390882 IFNGP01579 166 aa-0.41□□□□□ -2.48
RNU6-440P-201ENST00000390882 FGF7P21781 194 aa-0.41□□□□□ -2.48
RNU6-440P-201ENST00000390882 MRPL54Q6P161 138 aaKnown RBP-0.41□□□□□ -2.48
RNU6-440P-201ENST00000390882 TMEM263Q8WUH6 116 aaKnown RBP-0.41□□□□□ -2.48
RNU6-440P-201ENST00000390882 UQCR10Q9UDW1 63 aa-0.41□□□□□ -2.48
RNU6-440P-201ENST00000390882 MUC12Q9UKN1 5478 aa-0.41□□□□□ -2.48
RNU6-440P-201ENST00000390882 FAT2Q9NYQ8 4349 aa-0.41□□□□□ -2.48
RNU6-440P-201ENST00000390882 DIP2CQ9Y2E4 1556 aa-0.41□□□□□ -2.48
RNU6-440P-201ENST00000390882 NUP188Q5SRE5 1749 aa-0.41□□□□□ -2.48
RNU6-440P-201ENST00000390882 ZANQ9Y493 2812 aa-0.42□□□□□ -2.48
RNU6-440P-201ENST00000390882 TOP2BQ02880 1626 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms