RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 PRO0461Q9UI25 63 aa9.73□□□□□ -0.85
TRAPPC9-201ENST00000389328 PKD1L2Q7Z442 2459 aa9.73□□□□□ -0.85
TRAPPC9-201ENST00000389328 CMC4P56277 68 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC9-201ENST00000389328 SDIM1Q6ZPB5 146 aa9.73□□□□□ -0.85
TRAPPC9-201ENST00000389328 LST1O00453 97 aa9.73□□□□□ -0.85
TRAPPC9-201ENST00000389328 CELSR3Q9NYQ7 3312 aa9.72□□□□□ -0.85
TRAPPC9-201ENST00000389328 GHRHP01286 108 aa9.72□□□□□ -0.85
TRAPPC9-201ENST00000389328 FN1P02751 2386 aaKnown RBP9.72□□□□□ -0.85
TRAPPC9-201ENST00000389328 POM121L12Q8N7R1 296 aa9.72□□□□□ -0.85
TRAPPC9-201ENST00000389328 RBMY1FQ15415 496 aaKnown RBP9.72□□□□□ -0.85
TRAPPC9-201ENST00000389328 J3KT08 172 aa9.71□□□□□ -0.85
TRAPPC9-201ENST00000389328 HIST2H2BCQ6DN03 193 aa9.71□□□□□ -0.85
TRAPPC9-201ENST00000389328 HIST2H2BDQ6DRA6 164 aa9.71□□□□□ -0.85
TRAPPC9-201ENST00000389328 FASNP49327 2511 aaKnown RBP9.71□□□□□ -0.86
TRAPPC9-201ENST00000389328 J3QKU1 62 aa9.7□□□□□ -0.86
TRAPPC9-201ENST00000389328 ODF3Q96PU9 254 aa9.7□□□□□ -0.86
TRAPPC9-201ENST00000389328 PCSK5Q92824 1860 aa9.7□□□□□ -0.86
TRAPPC9-201ENST00000389328 IGLV10-54A0A075B6I4 117 aa9.7□□□□□ -0.86
TRAPPC9-201ENST00000389328 ANGP03950 147 aaKnown RBP9.7□□□□□ -0.86
TRAPPC9-201ENST00000389328 C9orf85Q96MD7 179 aa9.7□□□□□ -0.86
TRAPPC9-201ENST00000389328 PYGO1Q9Y3Y4 419 aa9.7□□□□□ -0.86
TRAPPC9-201ENST00000389328 DCANP1Q8TF63 244 aa9.69□□□□□ -0.86
TRAPPC9-201ENST00000389328 UQCRQO14949 82 aa9.69□□□□□ -0.86
TRAPPC9-201ENST00000389328 ADAMTSL4-AS1Q5T5F5 129 aa9.69□□□□□ -0.86
TRAPPC9-201ENST00000389328 C19orf84I3L1E1 186 aa9.69□□□□□ -0.86
TRAPPC9-201ENST00000389328 Q6ZTI0 123 aa9.69□□□□□ -0.86
TRAPPC9-201ENST00000389328 RNF152Q8N8N0 203 aa9.69□□□□□ -0.86
TRAPPC9-201ENST00000389328 LINC01546A6NGU7 62 aa9.68□□□□□ -0.86
TRAPPC9-201ENST00000389328 NDUFA1O15239 70 aa9.68□□□□□ -0.86
TRAPPC9-201ENST00000389328 SPANXCQ9NY87 97 aa9.68□□□□□ -0.86
TRAPPC9-201ENST00000389328 PRRC2AP48634 2157 aaKnown RBP9.68□□□□□ -0.86
TRAPPC9-201ENST00000389328 SLPIP03973 132 aa9.68□□□□□ -0.86
TRAPPC9-201ENST00000389328 PRB1P04280 392 aa9.68□□□□□ -0.86
TRAPPC9-201ENST00000389328 MTORP42345 2549 aa9.68□□□□□ -0.86
TRAPPC9-201ENST00000389328 SPEGQ15772 3267 aa9.68□□□□□ -0.86
TRAPPC9-201ENST00000389328 NBEAQ8NFP9 2946 aa9.68□□□□□ -0.86
TRAPPC9-201ENST00000389328 WDFY4Q6ZS81 3184 aa9.68□□□□□ -0.86
TRAPPC9-201ENST00000389328 LRRK2Q5S007 2527 aa9.68□□□□□ -0.86
TRAPPC9-201ENST00000389328 SZT2Q5T011 3432 aa9.68□□□□□ -0.86
TRAPPC9-201ENST00000389328 DSCR8Q96T75 97 aa9.68□□□□□ -0.86
TRAPPC9-201ENST00000389328 J3QLI3 93 aa9.67□□□□□ -0.86
TRAPPC9-201ENST00000389328 MAP6D1Q9H9H5 199 aa9.67□□□□□ -0.86
TRAPPC9-201ENST00000389328 MRPS36P82909 103 aaKnown RBP9.67□□□□□ -0.86
TRAPPC9-201ENST00000389328 hADV29S1A0JD25 119 aa9.67□□□□□ -0.86
TRAPPC9-201ENST00000389328 C3orf22Q8N5N4 141 aa9.67□□□□□ -0.86
TRAPPC9-201ENST00000389328 CCL24O00175 119 aa9.66□□□□□ -0.86
TRAPPC9-201ENST00000389328 UBE2D4Q9Y2X8 147 aa9.66□□□□□ -0.86
TRAPPC9-201ENST00000389328 Q96MF0 132 aa9.66□□□□□ -0.86
TRAPPC9-201ENST00000389328 ZNF462Q96JM2 2506 aa9.66□□□□□ -0.86
TRAPPC9-201ENST00000389328 F5H768 121 aa9.65□□□□□ -0.86
TRAPPC9-201ENST00000389328 ESM1Q9NQ30 184 aa9.65□□□□□ -0.86
TRAPPC9-201ENST00000389328 TRAV23DV6A0A075B6W5 121 aa9.65□□□□□ -0.87
TRAPPC9-201ENST00000389328 TIRAPP58753 221 aa9.65□□□□□ -0.87
TRAPPC9-201ENST00000389328 GYPEP15421 78 aa9.64□□□□□ -0.87
TRAPPC9-201ENST00000389328 NCR3O14931 201 aa9.64□□□□□ -0.87
TRAPPC9-201ENST00000389328 NDUFA7O95182 113 aa9.64□□□□□ -0.87
TRAPPC9-201ENST00000389328 TRAV25A0A0B4J276 109 aa9.64□□□□□ -0.87
TRAPPC9-201ENST00000389328 Q6Q795 121 aa9.64□□□□□ -0.87
TRAPPC9-201ENST00000389328 TRBV10-1A0A0K0K1A3 114 aa9.63□□□□□ -0.87
TRAPPC9-201ENST00000389328 RBM3P98179 157 aaKnown RBP9.63□□□□□ -0.87
TRAPPC9-201ENST00000389328 A0A1W2PPR1 153 aa9.63□□□□□ -0.87
TRAPPC9-201ENST00000389328 POLQO75417 2590 aa9.63□□□□□ -0.87
TRAPPC9-201ENST00000389328 KIF25-AS1Q9Y6Z4 181 aa9.62□□□□□ -0.87
TRAPPC9-201ENST00000389328 TIMM17BO60830 172 aa9.62□□□□□ -0.87
TRAPPC9-201ENST00000389328 TMEM89A2RUT3 159 aa9.62□□□□□ -0.87
TRAPPC9-201ENST00000389328 PSMB8P28062 276 aa9.62□□□□□ -0.87
TRAPPC9-201ENST00000389328 DAD1P61803 113 aa9.62□□□□□ -0.87
TRAPPC9-201ENST00000389328 C16orf74Q96GX8 76 aa9.61□□□□□ -0.87
TRAPPC9-201ENST00000389328 IGLV1-40P01703 118 aa9.6□□□□□ -0.87
TRAPPC9-201ENST00000389328 IMUPQ9GZP8 106 aa9.6□□□□□ -0.87
TRAPPC9-201ENST00000389328 JMJD7-PLA2G4BH0Y9G9 81 aa9.6□□□□□ -0.87
TRAPPC9-201ENST00000389328 ZNF561-AS1K7EIQ3 104 aa9.6□□□□□ -0.87
TRAPPC9-201ENST00000389328 LINC00315P59091 139 aa9.6□□□□□ -0.87
TRAPPC9-201ENST00000389328 C20orf197Q8N268 126 aa9.6□□□□□ -0.87
TRAPPC9-201ENST00000389328 FREM2Q5SZK8 3169 aa9.59□□□□□ -0.87
TRAPPC9-201ENST00000389328 LINC00694P0DN24 101 aa9.59□□□□□ -0.87
TRAPPC9-201ENST00000389328 FAM240AA0A1B0GVK7 77 aa9.59□□□□□ -0.87
TRAPPC9-201ENST00000389328 LINC00242Q5T6M2 205 aa9.58□□□□□ -0.88
TRAPPC9-201ENST00000389328 C18orf65Q6ZTR6 163 aa9.58□□□□□ -0.88
TRAPPC9-201ENST00000389328 COX6A2Q02221 97 aa9.58□□□□□ -0.88
TRAPPC9-201ENST00000389328 DSPP15924 2871 aaKnown RBP9.58□□□□□ -0.88
TRAPPC9-201ENST00000389328 DEFB114Q30KQ6 69 aa9.57□□□□□ -0.88
TRAPPC9-201ENST00000389328 AMELXQ99217 191 aa9.57□□□□□ -0.88
TRAPPC9-201ENST00000389328 TMEM256-PLSCR3K7ERE1 68 aa9.56□□□□□ -0.88
TRAPPC9-201ENST00000389328 AVPP01185 164 aa9.56□□□□□ -0.88
TRAPPC9-201ENST00000389328 COX7CP15954 63 aa9.56□□□□□ -0.88
TRAPPC9-201ENST00000389328 SMIM11BQ8TCY0 68 aa9.56□□□□□ -0.88
TRAPPC9-201ENST00000389328 CHCHD7Q9BUK0 85 aa9.56□□□□□ -0.88
TRAPPC9-201ENST00000389328 FHL3Q13643 280 aa9.56□□□□□ -0.88
TRAPPC9-201ENST00000389328 ENHOQ6UWT2 76 aa9.56□□□□□ -0.88
TRAPPC9-201ENST00000389328 Q6ZSN1 163 aa9.56□□□□□ -0.88
TRAPPC9-201ENST00000389328 USP17L23D6RBM5 183 aa9.55□□□□□ -0.88
TRAPPC9-201ENST00000389328 DEFB4AO15263 64 aa9.55□□□□□ -0.88
TRAPPC9-201ENST00000389328 KLK5Q9Y337 293 aaPredicted RBP9.55□□□□□ -0.88
TRAPPC9-201ENST00000389328 C4orf3Q8WVX3 66 aa9.55□□□□□ -0.88
TRAPPC9-201ENST00000389328 LOC100131303A0A0U1RQF7 123 aa9.55□□□□□ -0.88
TRAPPC9-201ENST00000389328 RPL18AQ02543 176 aaKnown RBP9.54□□□□□ -0.88
TRAPPC9-201ENST00000389328 A0A087WVE0 104 aa9.54□□□□□ -0.88
TRAPPC9-201ENST00000389328 SMIM1B2RUZ4 78 aa9.54□□□□□ -0.88
TRAPPC9-201ENST00000389328 UPK3BQ9BT76 320 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms