RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 SMKR1H3BMG3 65 aa8.21□□□□□ -1.1
RPF1-201ENST00000370654 POLR2KP53803 58 aaKnown RBP8.21□□□□□ -1.1
RPF1-201ENST00000370654 SMIM15Q7Z3B0 74 aa8.21□□□□□ -1.1
RPF1-201ENST00000370654 C7orf33Q8WU49 177 aa8.21□□□□□ -1.1
RPF1-201ENST00000370654 RAB4AP20338 218 aa8.2□□□□□ -1.1
RPF1-201ENST00000370654 TEX261Q6UWH6 196 aa8.2□□□□□ -1.1
RPF1-201ENST00000370654 AMN1Q8IY45 258 aa8.2□□□□□ -1.1
RPF1-201ENST00000370654 ST20Q9HBF5 79 aa8.2□□□□□ -1.1
RPF1-201ENST00000370654 CDC42SE2Q9NRR3 84 aa8.2□□□□□ -1.1
RPF1-201ENST00000370654 HIGD1CA8MV81 97 aa8.19□□□□□ -1.1
RPF1-201ENST00000370654 ZNF25P17030 456 aaPredicted RBP8.19□□□□□ -1.1
RPF1-201ENST00000370654 SMCPP49901 116 aaPredicted RBP8.19□□□□□ -1.1
RPF1-201ENST00000370654 CT83Q5H943 113 aa8.19□□□□□ -1.1
RPF1-201ENST00000370654 LINC01551Q86U37 167 aa8.19□□□□□ -1.1
RPF1-201ENST00000370654 LINC01600Q96MT4 127 aa8.19□□□□□ -1.1
RPF1-201ENST00000370654 IGHV1-58A0A0C4DH39 117 aa8.18□□□□□ -1.1
RPF1-201ENST00000370654 RNASE13Q5GAN3 156 aaKnown RBP8.18□□□□□ -1.1
RPF1-201ENST00000370654 TSKUQ8WUA8 353 aa8.18□□□□□ -1.1
RPF1-201ENST00000370654 TMEM101Q96IK0 257 aa8.18□□□□□ -1.1
RPF1-201ENST00000370654 TMEM191AQ9H0A3 160 aa8.18□□□□□ -1.1
RPF1-201ENST00000370654 hCG_2014768A0A024R1R8 64 aa8.17□□□□□ -1.1
RPF1-201ENST00000370654 TRBV27A0A0K0K1C4 114 aa8.17□□□□□ -1.1
RPF1-201ENST00000370654 A0A1B0GUT8 65 aa8.17□□□□□ -1.1
RPF1-201ENST00000370654 BLOC1S1P78537 153 aa8.17□□□□□ -1.1
RPF1-201ENST00000370654 MRPL52Q86TS9 123 aaKnown RBP8.17□□□□□ -1.1
RPF1-201ENST00000370654 MRAP2Q96G30 205 aa8.17□□□□□ -1.1
RPF1-201ENST00000370654 BTF3L4Q96K17 158 aa8.17□□□□□ -1.1
RPF1-201ENST00000370654 CARD19Q96LW7 228 aa8.17□□□□□ -1.1
RPF1-201ENST00000370654 SRP19P09132 144 aaKnown RBP8.16□□□□□ -1.1
RPF1-201ENST00000370654 CD164L2Q6UWJ8 174 aa8.16□□□□□ -1.1
RPF1-201ENST00000370654 ZNF664Q8N3J9 261 aa8.16□□□□□ -1.1
RPF1-201ENST00000370654 NRACQ8N912 160 aa8.16□□□□□ -1.1
RPF1-201ENST00000370654 SMIM7Q9BQ49 75 aa8.16□□□□□ -1.1
RPF1-201ENST00000370654 V9GYV3 84 aa8.16□□□□□ -1.1
RPF1-201ENST00000370654 IGLV4-69A0A075B6H9 119 aa8.15□□□□□ -1.1
RPF1-201ENST00000370654 KRTAP10-8P60410 259 aa8.15□□□□□ -1.1
RPF1-201ENST00000370654 SYCNQ0VAF6 134 aa8.15□□□□□ -1.1
RPF1-201ENST00000370654 SRSF9Q13242 221 aaKnown RBP eCLIP8.15□□□□□ -1.1
RPF1-201ENST00000370654 SS18Q15532 418 aa8.15□□□□□ -1.1
RPF1-201ENST00000370654 AKAP14Q86UN6 197 aa8.15□□□□□ -1.1
RPF1-201ENST00000370654 EIF5A2Q9GZV4 153 aaKnown RBP8.15□□□□□ -1.1
RPF1-201ENST00000370654 OSTCQ9NRP0 149 aa8.15□□□□□ -1.1
RPF1-201ENST00000370654 A0A1W2PNN7 141 aa8.14□□□□□ -1.11
RPF1-201ENST00000370654 C7orf77A4D0Y5 90 aa8.14□□□□□ -1.11
RPF1-201ENST00000370654 NUP35Q8NFH5 326 aa8.14□□□□□ -1.11
RPF1-201ENST00000370654 FAM210AQ96ND0 272 aa8.14□□□□□ -1.11
RPF1-201ENST00000370654 UBE2D4Q9Y2X8 147 aa8.14□□□□□ -1.11
RPF1-201ENST00000370654 RNF213Q63HN8 5207 aa8.13□□□□□ -1.11
RPF1-201ENST00000370654 A0A0J9YXV3 536 aa8.13□□□□□ -1.11
RPF1-201ENST00000370654 ZNF727A8MUV8 499 aa8.13□□□□□ -1.11
RPF1-201ENST00000370654 C9JQL5 133 aa8.13□□□□□ -1.11
RPF1-201ENST00000370654 CAMPP49913 170 aa8.13□□□□□ -1.11
RPF1-201ENST00000370654 PTTG1IPP53801 180 aa8.13□□□□□ -1.11
RPF1-201ENST00000370654 GAGE2BQ13066 116 aa8.13□□□□□ -1.11
RPF1-201ENST00000370654 FAM104AQ969W3 186 aa8.13□□□□□ -1.11
RPF1-201ENST00000370654 BORCS7Q96B45 105 aa8.13□□□□□ -1.11
RPF1-201ENST00000370654 ZNF561-AS1K7EIQ3 104 aa8.12□□□□□ -1.11
RPF1-201ENST00000370654 Q6ZUT4 128 aa8.12□□□□□ -1.11
RPF1-201ENST00000370654 TRAV13-1A0A0B4J241 112 aa8.11□□□□□ -1.11
RPF1-201ENST00000370654 VCYO14598 125 aa8.11□□□□□ -1.11
RPF1-201ENST00000370654 SUMO2P61956 95 aaKnown RBP8.11□□□□□ -1.11
RPF1-201ENST00000370654 SPINK6Q6UWN8 80 aa8.11□□□□□ -1.11
RPF1-201ENST00000370654 C5orf38Q86SI9 138 aa8.11□□□□□ -1.11
RPF1-201ENST00000370654 ISOC2Q96AB3 205 aa8.11□□□□□ -1.11
RPF1-201ENST00000370654 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.1□□□□□ -1.11
RPF1-201ENST00000370654 FCER1GP30273 86 aa8.1□□□□□ -1.11
RPF1-201ENST00000370654 RPL23P62829 140 aaKnown RBP8.1□□□□□ -1.11
RPF1-201ENST00000370654 MRPL51Q4U2R6 128 aaKnown RBP8.1□□□□□ -1.11
RPF1-201ENST00000370654 LINC00474Q9P2X8 69 aa8.1□□□□□ -1.11
RPF1-201ENST00000370654 COX7A2LO14548 114 aa8.1□□□□□ -1.11
RPF1-201ENST00000370654 RPL39P62891 51 aaKnown RBP8.1□□□□□ -1.11
RPF1-201ENST00000370654 SRSF3P84103 164 aaKnown RBP8.1□□□□□ -1.11
RPF1-201ENST00000370654 RIGQ13278 110 aa8.1□□□□□ -1.11
RPF1-201ENST00000370654 Q6ZRP5 223 aa8.1□□□□□ -1.11
RPF1-201ENST00000370654 OPRPNQ99935 248 aaPredicted RBP8.1□□□□□ -1.11
RPF1-201ENST00000370654 CSDC2Q9Y534 153 aaKnown RBP8.1□□□□□ -1.11
RPF1-201ENST00000370654 LOC107984640A0A0U1RRK4 108 aa8.09□□□□□ -1.12
RPF1-201ENST00000370654 C1orf196B1AJZ1 125 aa8.09□□□□□ -1.12
RPF1-201ENST00000370654 MALP21145 153 aa8.09□□□□□ -1.12
RPF1-201ENST00000370654 FAM104BQ5XKR9 115 aa8.09□□□□□ -1.12
RPF1-201ENST00000370654 CAMK2N2Q96S95 79 aa8.09□□□□□ -1.12
RPF1-201ENST00000370654 LORP23490 312 aaPredicted RBP8.08□□□□□ -1.12
RPF1-201ENST00000370654 TMEM241Q24JQ0 296 aa8.08□□□□□ -1.12
RPF1-201ENST00000370654 C9orf116Q5BN46 136 aaPredicted RBP8.08□□□□□ -1.12
RPF1-201ENST00000370654 PHF5AQ7RTV0 110 aaKnown RBP8.08□□□□□ -1.12
RPF1-201ENST00000370654 KRTAP11-1Q8IUC1 163 aa8.08□□□□□ -1.12
RPF1-201ENST00000370654 SMIM27A0A1W2PRY6 76 aa8.07□□□□□ -1.12
RPF1-201ENST00000370654 APOMO95445 188 aa8.07□□□□□ -1.12
RPF1-201ENST00000370654 FAM74A3Q4VXF1 159 aa8.07□□□□□ -1.12
RPF1-201ENST00000370654 NAT8BQ9UHF3 227 aa8.07□□□□□ -1.12
RPF1-201ENST00000370654 PSORS1C2Q9UIG4 136 aa8.07□□□□□ -1.12
RPF1-201ENST00000370654 A0A1B0GVG6 124 aa8.06□□□□□ -1.12
RPF1-201ENST00000370654 RPL18AQ02543 176 aaKnown RBP8.06□□□□□ -1.12
RPF1-201ENST00000370654 SPAG11BQ08648 103 aa8.06□□□□□ -1.12
RPF1-201ENST00000370654 ADIRFQ15847 76 aa8.06□□□□□ -1.12
RPF1-201ENST00000370654 C10orf25Q5T742 122 aa8.06□□□□□ -1.12
RPF1-201ENST00000370654 REG3GQ6UW15 175 aa8.06□□□□□ -1.12
RPF1-201ENST00000370654 C2orf48Q96LS8 159 aa8.06□□□□□ -1.12
RPF1-201ENST00000370654 KIR2DL4Q99706 377 aa8.06□□□□□ -1.12
RPF1-201ENST00000370654 TIMM21Q9BVV7 248 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms