RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 A0A096LNI7 61 aa9.54□□□□□ -0.88
SSR4-204ENST00000370087 TMEM218A2RU14 115 aa9.54□□□□□ -0.88
SSR4-204ENST00000370087 MGPP08493 103 aa9.54□□□□□ -0.88
SSR4-204ENST00000370087 SRSF9Q13242 221 aaKnown RBP eCLIP9.54□□□□□ -0.88
SSR4-204ENST00000370087 REG3GQ6UW15 175 aa9.54□□□□□ -0.88
SSR4-204ENST00000370087 KRTAP9-2Q9BYQ4 174 aa9.54□□□□□ -0.88
SSR4-204ENST00000370087 ADCYAP1P18509 176 aa9.53□□□□□ -0.88
SSR4-204ENST00000370087 RIGQ13278 110 aa9.53□□□□□ -0.88
SSR4-204ENST00000370087 ANAPC16Q96DE5 110 aa9.53□□□□□ -0.88
SSR4-204ENST00000370087 SEC11CQ9BY50 192 aa9.53□□□□□ -0.88
SSR4-204ENST00000370087 GAGE12HA6NDE8 117 aa9.52□□□□□ -0.89
SSR4-204ENST00000370087 RPS10P46783 165 aaKnown RBP9.52□□□□□ -0.89
SSR4-204ENST00000370087 A0A1B0GUV1 79 aa9.51□□□□□ -0.89
SSR4-204ENST00000370087 A0A1B0GW15 77 aa9.51□□□□□ -0.89
SSR4-204ENST00000370087 SMIM27A0A1W2PRY6 76 aa9.51□□□□□ -0.89
SSR4-204ENST00000370087 M0QY20 66 aa9.51□□□□□ -0.89
SSR4-204ENST00000370087 ATP6V1G1O75348 118 aa9.51□□□□□ -0.89
SSR4-204ENST00000370087 NUP35Q8NFH5 326 aa9.51□□□□□ -0.89
SSR4-204ENST00000370087 TMEM243Q9BU79 118 aa9.51□□□□□ -0.89
SSR4-204ENST00000370087 S100A8P05109 93 aa9.5□□□□□ -0.89
SSR4-204ENST00000370087 SUMO4Q6EEV6 95 aa9.5□□□□□ -0.89
SSR4-204ENST00000370087 IGKV3OR2-268A0A0C4DH90 116 aa9.48□□□□□ -0.89
SSR4-204ENST00000370087 RASL11AQ6T310 242 aa9.48□□□□□ -0.89
SSR4-204ENST00000370087 TMEM191AQ9H0A3 160 aa9.48□□□□□ -0.89
SSR4-204ENST00000370087 GVQW2A0A096LPI5 108 aaPredicted RBP9.47□□□□□ -0.89
SSR4-204ENST00000370087 CTDSP1Q9GZU7 261 aa9.47□□□□□ -0.89
SSR4-204ENST00000370087 APOC3P02656 99 aa9.46□□□□□ -0.9
SSR4-204ENST00000370087 HBBP68871 147 aa9.46□□□□□ -0.9
SSR4-204ENST00000370087 CFAP161Q6P656 301 aa9.46□□□□□ -0.9
SSR4-204ENST00000370087 ATP5L2Q7Z4Y8 100 aa9.46□□□□□ -0.9
SSR4-204ENST00000370087 LINC00526Q96FQ7 95 aa9.46□□□□□ -0.9
SSR4-204ENST00000370087 NIT2Q9NQR4 276 aa9.46□□□□□ -0.9
SSR4-204ENST00000370087 FAT4Q6V0I7 4981 aa9.45□□□□□ -0.9
SSR4-204ENST00000370087 Q6ZRP5 223 aa9.45□□□□□ -0.9
SSR4-204ENST00000370087 CHCHD10Q8WYQ3 142 aaPredicted RBP9.45□□□□□ -0.9
SSR4-204ENST00000370087 IMMP2LQ96T52 175 aa9.45□□□□□ -0.9
SSR4-204ENST00000370087 CARHSP1Q9Y2V2 147 aaKnown RBP9.45□□□□□ -0.9
SSR4-204ENST00000370087 PPP1R17O96001 155 aa9.44□□□□□ -0.9
SSR4-204ENST00000370087 S100PP25815 95 aa9.44□□□□□ -0.9
SSR4-204ENST00000370087 CAMPP49913 170 aa9.44□□□□□ -0.9
SSR4-204ENST00000370087 RHEBQ15382 184 aa9.44□□□□□ -0.9
SSR4-204ENST00000370087 C10orf91Q5T1B1 145 aa9.44□□□□□ -0.9
SSR4-204ENST00000370087 MRAP2Q96G30 205 aa9.44□□□□□ -0.9
SSR4-204ENST00000370087 UBE2L6O14933 153 aa9.43□□□□□ -0.9
SSR4-204ENST00000370087 AMTP48728 403 aa9.43□□□□□ -0.9
SSR4-204ENST00000370087 FOXI1Q12951 378 aa9.43□□□□□ -0.9
SSR4-204ENST00000370087 MRPL54Q6P161 138 aaKnown RBP9.43□□□□□ -0.9
SSR4-204ENST00000370087 GATD1Q8NB37 220 aa9.43□□□□□ -0.9
SSR4-204ENST00000370087 BTF3L4Q96K17 158 aa9.43□□□□□ -0.9
SSR4-204ENST00000370087 TRAV26-2A0A0B4J265 109 aa9.42□□□□□ -0.9
SSR4-204ENST00000370087 SVBPQ8N300 66 aa9.42□□□□□ -0.9
SSR4-204ENST00000370087 TMEM242Q9NWH2 141 aa9.42□□□□□ -0.9
SSR4-204ENST00000370087 TRAV9-1A0A075B6T8 112 aa9.41□□□□□ -0.9
SSR4-204ENST00000370087 RAB4AP20338 218 aa9.41□□□□□ -0.9
SSR4-204ENST00000370087 AMN1Q8IY45 258 aa9.41□□□□□ -0.9
SSR4-204ENST00000370087 SNAPINO95295 136 aa9.4□□□□□ -0.9
SSR4-204ENST00000370087 COTL1Q14019 142 aa9.4□□□□□ -0.9
SSR4-204ENST00000370087 FAM104BQ5XKR9 115 aa9.4□□□□□ -0.9
SSR4-204ENST00000370087 ST20Q9HBF5 79 aa9.4□□□□□ -0.9
SSR4-204ENST00000370087 RPS10P5Q9NQ39 176 aa9.4□□□□□ -0.9
SSR4-204ENST00000370087 LINC00474Q9P2X8 69 aa9.4□□□□□ -0.9
SSR4-204ENST00000370087 A0A1B0GXF2 115 aa9.39□□□□□ -0.91
SSR4-204ENST00000370087 C7orf77A4D0Y5 90 aa9.39□□□□□ -0.91
SSR4-204ENST00000370087 CKS2P33552 79 aa9.39□□□□□ -0.91
SSR4-204ENST00000370087 CARD19Q96LW7 228 aa9.39□□□□□ -0.91
SSR4-204ENST00000370087 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.38□□□□□ -0.91
SSR4-204ENST00000370087 TRBV6-5A0A0K0K1A5 114 aa9.38□□□□□ -0.91
SSR4-204ENST00000370087 A0A1W2PNN7 141 aa9.38□□□□□ -0.91
SSR4-204ENST00000370087 IGKV2-29A2NJV5 120 aaPredicted RBP9.38□□□□□ -0.91
SSR4-204ENST00000370087 PPBPP02775 128 aa9.38□□□□□ -0.91
SSR4-204ENST00000370087 S100A1P23297 94 aa9.38□□□□□ -0.91
SSR4-204ENST00000370087 PRR26Q8N8Z3 221 aa9.38□□□□□ -0.91
SSR4-204ENST00000370087 RPL39LQ96EH5 51 aaKnown RBP9.38□□□□□ -0.91
SSR4-204ENST00000370087 PSORS1C2Q9UIG4 136 aa9.38□□□□□ -0.91
SSR4-204ENST00000370087 KRTAP9-6A0A140TA67 174 aa9.37□□□□□ -0.91
SSR4-204ENST00000370087 SDHAF1A6NFY7 115 aa9.37□□□□□ -0.91
SSR4-204ENST00000370087 NCR2O95944 276 aa9.37□□□□□ -0.91
SSR4-204ENST00000370087 PMCHP20382 165 aa9.37□□□□□ -0.91
SSR4-204ENST00000370087 XCL1P47992 114 aa9.37□□□□□ -0.91
SSR4-204ENST00000370087 PTTG1IPP53801 180 aa9.37□□□□□ -0.91
SSR4-204ENST00000370087 MRPL51Q4U2R6 128 aaKnown RBP9.37□□□□□ -0.91
SSR4-204ENST00000370087 I3L3M4 83 aa9.36□□□□□ -0.91
SSR4-204ENST00000370087 SCO1O75880 301 aa9.36□□□□□ -0.91
SSR4-204ENST00000370087 COX19Q49B96 90 aa9.36□□□□□ -0.91
SSR4-204ENST00000370087 AMMECR1LQ6DCA0 310 aa9.35□□□□□ -0.91
SSR4-204ENST00000370087 RNASEKQ6P5S7 137 aaKnown RBP9.35□□□□□ -0.91
SSR4-204ENST00000370087 ORMDL3Q8N138 153 aa9.35□□□□□ -0.91
SSR4-204ENST00000370087 IGHV1-58A0A0C4DH39 117 aa9.34□□□□□ -0.91
SSR4-204ENST00000370087 VCYO14598 125 aa9.34□□□□□ -0.91
SSR4-204ENST00000370087 TCAPO15273 167 aa9.34□□□□□ -0.91
SSR4-204ENST00000370087 CCL25O15444 150 aa9.34□□□□□ -0.91
SSR4-204ENST00000370087 APCSP02743 223 aa9.34□□□□□ -0.91
SSR4-204ENST00000370087 FGF6P10767 208 aa9.34□□□□□ -0.91
SSR4-204ENST00000370087 SUMO2P61956 95 aaKnown RBP9.34□□□□□ -0.91
SSR4-204ENST00000370087 GAGE2BQ13066 116 aa9.34□□□□□ -0.91
SSR4-204ENST00000370087 ZNF664Q8N3J9 261 aa9.34□□□□□ -0.91
SSR4-204ENST00000370087 KIR2DL4Q99706 377 aa9.34□□□□□ -0.91
SSR4-204ENST00000370087 C20orf78Q9BR46 151 aa9.34□□□□□ -0.91
SSR4-204ENST00000370087 D6R8Y8 96 aa9.33□□□□□ -0.92
SSR4-204ENST00000370087 SMKR1H3BMG3 65 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms