RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 LRP1BQ9NZR2 4599 aa10.29□□□□□ -0.76
TSPAN4-201ENST00000346501 RAB5AP20339 215 aa10.29□□□□□ -0.76
TSPAN4-201ENST00000346501 LINC01620Q4KN68 170 aa10.29□□□□□ -0.76
TSPAN4-201ENST00000346501 TMEM136Q6ZRR5 245 aa10.29□□□□□ -0.76
TSPAN4-201ENST00000346501 ZNF664Q8N3J9 261 aa10.29□□□□□ -0.76
TSPAN4-201ENST00000346501 RYR1P21817 5038 aa10.29□□□□□ -0.76
TSPAN4-201ENST00000346501 TMEM218A2RU14 115 aa10.28□□□□□ -0.76
TSPAN4-201ENST00000346501 SMR3BP02814 79 aaPredicted RBP10.28□□□□□ -0.76
TSPAN4-201ENST00000346501 IFITM2Q01629 132 aa10.28□□□□□ -0.76
TSPAN4-201ENST00000346501 PRELID3AQ96N28 172 aa10.28□□□□□ -0.76
TSPAN4-201ENST00000346501 SMIM2Q9BVW6 85 aa10.28□□□□□ -0.76
TSPAN4-201ENST00000346501 HAMPP81172 84 aa10.27□□□□□ -0.77
TSPAN4-201ENST00000346501 Q5VSD8 79 aa10.27□□□□□ -0.77
TSPAN4-201ENST00000346501 Q6ZSA8 131 aa10.27□□□□□ -0.77
TSPAN4-201ENST00000346501 CTDSP1Q9GZU7 261 aa10.27□□□□□ -0.77
TSPAN4-201ENST00000346501 CDC42SE2Q9NRR3 84 aa10.27□□□□□ -0.77
TSPAN4-201ENST00000346501 FAM30AQ9NZY2 134 aa10.27□□□□□ -0.77
TSPAN4-201ENST00000346501 LAMTOR2Q9Y2Q5 125 aa10.27□□□□□ -0.77
TSPAN4-201ENST00000346501 CSDC2Q9Y534 153 aaKnown RBP10.27□□□□□ -0.77
TSPAN4-201ENST00000346501 LINC00959A0A1B0GUT2 108 aa10.26□□□□□ -0.77
TSPAN4-201ENST00000346501 CCL25O15444 150 aa10.26□□□□□ -0.77
TSPAN4-201ENST00000346501 S100PP25815 95 aa10.26□□□□□ -0.77
TSPAN4-201ENST00000346501 XCL1P47992 114 aa10.26□□□□□ -0.77
TSPAN4-201ENST00000346501 C9orf163Q8N9P6 203 aa10.26□□□□□ -0.77
TSPAN4-201ENST00000346501 IMMP2LQ96T52 175 aa10.26□□□□□ -0.77
TSPAN4-201ENST00000346501 SEC11CQ9BY50 192 aa10.26□□□□□ -0.77
TSPAN4-201ENST00000346501 KRTAP4-5Q9BYR2 181 aa10.26□□□□□ -0.77
TSPAN4-201ENST00000346501 C1orf196B1AJZ1 125 aa10.25□□□□□ -0.77
TSPAN4-201ENST00000346501 NPYP01303 97 aa10.25□□□□□ -0.77
TSPAN4-201ENST00000346501 COMMD7Q86VX2 200 aa10.25□□□□□ -0.77
TSPAN4-201ENST00000346501 TIMM21Q9BVV7 248 aa10.25□□□□□ -0.77
TSPAN4-201ENST00000346501 MAP1LC3AQ9H492 121 aa10.25□□□□□ -0.77
TSPAN4-201ENST00000346501 CNBPP62633 177 aaKnown RBP10.24□□□□□ -0.77
TSPAN4-201ENST00000346501 CHAC1Q9BUX1 264 aa10.24□□□□□ -0.77
TSPAN4-201ENST00000346501 UBE2D4Q9Y2X8 147 aa10.24□□□□□ -0.77
TSPAN4-201ENST00000346501 IGHV3-64A0A075B6Q5 118 aa10.23□□□□□ -0.77
TSPAN4-201ENST00000346501 TRAV9-1A0A075B6T8 112 aa10.23□□□□□ -0.77
TSPAN4-201ENST00000346501 PLA2G1BP04054 148 aaKnown RBP10.23□□□□□ -0.77
TSPAN4-201ENST00000346501 SPANXA1Q9NS26 97 aa10.23□□□□□ -0.77
TSPAN4-201ENST00000346501 DNAH5Q8TE73 4624 aa10.22□□□□□ -0.77
TSPAN4-201ENST00000346501 IGHV1-58A0A0C4DH39 117 aa10.22□□□□□ -0.77
TSPAN4-201ENST00000346501 MALP21145 153 aa10.22□□□□□ -0.77
TSPAN4-201ENST00000346501 CD164L2Q6UWJ8 174 aa10.22□□□□□ -0.77
TSPAN4-201ENST00000346501 SCXQ7RTU7 201 aa10.22□□□□□ -0.77
TSPAN4-201ENST00000346501 DPH3Q96FX2 82 aa10.22□□□□□ -0.77
TSPAN4-201ENST00000346501 PKIGQ9Y2B9 76 aa10.22□□□□□ -0.77
TSPAN4-201ENST00000346501 INAFM2P0DMQ5 153 aa10.21□□□□□ -0.77
TSPAN4-201ENST00000346501 FOXI1Q12951 378 aa10.21□□□□□ -0.77
TSPAN4-201ENST00000346501 HIGD2BQ4VC39 106 aa10.21□□□□□ -0.77
TSPAN4-201ENST00000346501 HSPG2P98160 4391 aa10.21□□□□□ -0.78
TSPAN4-201ENST00000346501 TRAV13-1A0A0B4J241 112 aa10.2□□□□□ -0.78
TSPAN4-201ENST00000346501 LOC389332A0A1B0GUA5 103 aa10.2□□□□□ -0.78
TSPAN4-201ENST00000346501 ZNF561-AS1K7EIQ3 104 aa10.2□□□□□ -0.78
TSPAN4-201ENST00000346501 ADCYAP1P18509 176 aa10.2□□□□□ -0.78
TSPAN4-201ENST00000346501 IFI27P40305 119 aaPredicted RBP10.2□□□□□ -0.78
TSPAN4-201ENST00000346501 C15orf56Q8N910 161 aa10.2□□□□□ -0.78
TSPAN4-201ENST00000346501 GVQW2A0A096LPI5 108 aaPredicted RBP10.19□□□□□ -0.78
TSPAN4-201ENST00000346501 G0S2P27469 103 aa10.19□□□□□ -0.78
TSPAN4-201ENST00000346501 COX19Q49B96 90 aa10.19□□□□□ -0.78
TSPAN4-201ENST00000346501 Q6ZUT4 128 aa10.19□□□□□ -0.78
TSPAN4-201ENST00000346501 LINC00528Q8N1L1 170 aa10.19□□□□□ -0.78
TSPAN4-201ENST00000346501 PRSS47A8MTI9 375 aa10.18□□□□□ -0.78
TSPAN4-201ENST00000346501 K7EMI3 77 aa10.18□□□□□ -0.78
TSPAN4-201ENST00000346501 COX7A2LO14548 114 aa10.18□□□□□ -0.78
TSPAN4-201ENST00000346501 APOMO95445 188 aa10.18□□□□□ -0.78
TSPAN4-201ENST00000346501 RPL39P62891 51 aaKnown RBP10.18□□□□□ -0.78
TSPAN4-201ENST00000346501 RNASE13Q5GAN3 156 aaKnown RBP10.18□□□□□ -0.78
TSPAN4-201ENST00000346501 CIRBP-AS1Q8TBR5 109 aa10.18□□□□□ -0.78
TSPAN4-201ENST00000346501 APOBP04114 4563 aaKnown RBP10.18□□□□□ -0.78
TSPAN4-201ENST00000346501 ABCA13Q86UQ4 5058 aa10.18□□□□□ -0.78
TSPAN4-201ENST00000346501 MRPS36P82909 103 aaKnown RBP10.17□□□□□ -0.78
TSPAN4-201ENST00000346501 RHEBQ15382 184 aa10.17□□□□□ -0.78
TSPAN4-201ENST00000346501 NDUFA5Q16718 116 aa10.17□□□□□ -0.78
TSPAN4-201ENST00000346501 ORMDL2Q53FV1 153 aa10.17□□□□□ -0.78
TSPAN4-201ENST00000346501 SDIM1Q6ZPB5 146 aa10.17□□□□□ -0.78
TSPAN4-201ENST00000346501 Q8N8P6 123 aa10.17□□□□□ -0.78
TSPAN4-201ENST00000346501 NXT2Q9NPJ8 142 aaKnown RBP10.17□□□□□ -0.78
TSPAN4-201ENST00000346501 IFITM10A6NMD0 228 aa10.16□□□□□ -0.78
TSPAN4-201ENST00000346501 Q6ZN92 141 aa10.16□□□□□ -0.78
TSPAN4-201ENST00000346501 RPS10P5Q9NQ39 176 aa10.16□□□□□ -0.78
TSPAN4-201ENST00000346501 CYSLTR1Q9Y271 337 aa10.16□□□□□ -0.78
TSPAN4-201ENST00000346501 PYGO1Q9Y3Y4 419 aa10.15□□□□□ -0.78
TSPAN4-201ENST00000346501 C2orf88Q9BSF0 95 aa10.14□□□□□ -0.79
TSPAN4-201ENST00000346501 CARHSP1Q9Y2V2 147 aaKnown RBP10.14□□□□□ -0.79
TSPAN4-201ENST00000346501 MT-ND6P03923 174 aa10.13□□□□□ -0.79
TSPAN4-201ENST00000346501 SLPIP03973 132 aa10.13□□□□□ -0.79
TSPAN4-201ENST00000346501 SYCNQ0VAF6 134 aa10.13□□□□□ -0.79
TSPAN4-201ENST00000346501 PAPPA-AS1Q5QFB9 102 aa10.13□□□□□ -0.79
TSPAN4-201ENST00000346501 C10orf91Q5T1B1 145 aa10.13□□□□□ -0.79
TSPAN4-201ENST00000346501 TMEM141Q96I45 108 aa10.13□□□□□ -0.79
TSPAN4-201ENST00000346501 CARD19Q96LW7 228 aa10.13□□□□□ -0.79
TSPAN4-201ENST00000346501 GNB1LQ9BYB4 327 aa10.13□□□□□ -0.79
TSPAN4-201ENST00000346501 TGIF2-C20orf24A0A0A6YYL0 155 aa10.12□□□□□ -0.79
TSPAN4-201ENST00000346501 COX6A2Q02221 97 aa10.12□□□□□ -0.79
TSPAN4-201ENST00000346501 C2orf66Q6UXQ4 117 aa10.12□□□□□ -0.79
TSPAN4-201ENST00000346501 TEX43Q6ZNM6 134 aa10.12□□□□□ -0.79
TSPAN4-201ENST00000346501 C5orf38Q86SI9 138 aa10.12□□□□□ -0.79
TSPAN4-201ENST00000346501 PRSS3P2Q8NHM4 247 aa10.12□□□□□ -0.79
TSPAN4-201ENST00000346501 LINC00474Q9P2X8 69 aa10.12□□□□□ -0.79
TSPAN4-201ENST00000346501 KIAA1644Q3SXP7 199 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms