RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 TMEM242Q9NWH2 141 aa7.95□□□□□ -1.14
SGCA-202ENST00000344627 HMCN2Q8NDA2 5059 aa7.94□□□□□ -1.14
SGCA-202ENST00000344627 PPP1R2P9O14990 202 aa7.94□□□□□ -1.14
SGCA-202ENST00000344627 GAS8-AS1O95177 125 aa7.94□□□□□ -1.14
SGCA-202ENST00000344627 SLPIP03973 132 aa7.94□□□□□ -1.14
SGCA-202ENST00000344627 ADIRFQ15847 76 aa7.94□□□□□ -1.14
SGCA-202ENST00000344627 AMN1Q8IY45 258 aa7.94□□□□□ -1.14
SGCA-202ENST00000344627 OR5A1Q8NGJ0 315 aa7.94□□□□□ -1.14
SGCA-202ENST00000344627 MRAP2Q96G30 205 aa7.94□□□□□ -1.14
SGCA-202ENST00000344627 TMEM191AQ9H0A3 160 aa7.94□□□□□ -1.14
SGCA-202ENST00000344627 CARHSP1Q9Y2V2 147 aaKnown RBP7.94□□□□□ -1.14
SGCA-202ENST00000344627 TRBV6-5A0A0K0K1A5 114 aa7.93□□□□□ -1.14
SGCA-202ENST00000344627 FAM231BA6NCW3 169 aa7.93□□□□□ -1.14
SGCA-202ENST00000344627 CHTF8P0CG12 524 aa7.93□□□□□ -1.14
SGCA-202ENST00000344627 ZNF25P17030 456 aaPredicted RBP7.93□□□□□ -1.14
SGCA-202ENST00000344627 RAB4AP20338 218 aa7.93□□□□□ -1.14
SGCA-202ENST00000344627 RPS10P46783 165 aaKnown RBP7.93□□□□□ -1.14
SGCA-202ENST00000344627 XCL1P47992 114 aa7.93□□□□□ -1.14
SGCA-202ENST00000344627 C10orf91Q5T1B1 145 aa7.93□□□□□ -1.14
SGCA-202ENST00000344627 SVBPQ8N300 66 aa7.93□□□□□ -1.14
SGCA-202ENST00000344627 C15orf56Q8N910 161 aa7.93□□□□□ -1.14
SGCA-202ENST00000344627 SMKR1H3BMG3 65 aa7.92□□□□□ -1.14
SGCA-202ENST00000344627 SNAPINO95295 136 aa7.92□□□□□ -1.14
SGCA-202ENST00000344627 TSHBP01222 138 aa7.92□□□□□ -1.14
SGCA-202ENST00000344627 MT-ND4LP03901 98 aa7.92□□□□□ -1.14
SGCA-202ENST00000344627 FCER1GP30273 86 aa7.92□□□□□ -1.14
SGCA-202ENST00000344627 RPL23P62829 140 aaKnown RBP7.92□□□□□ -1.14
SGCA-202ENST00000344627 NUP35Q8NFH5 326 aa7.92□□□□□ -1.14
SGCA-202ENST00000344627 PKIGQ9Y2B9 76 aa7.92□□□□□ -1.14
SGCA-202ENST00000344627 V9GYV3 84 aa7.92□□□□□ -1.14
SGCA-202ENST00000344627 A0A087WYN8 130 aa7.91□□□□□ -1.14
SGCA-202ENST00000344627 LINC00959A0A1B0GUT2 108 aa7.91□□□□□ -1.14
SGCA-202ENST00000344627 CCL25O15444 150 aa7.91□□□□□ -1.14
SGCA-202ENST00000344627 ESDP10768 282 aa7.91□□□□□ -1.14
SGCA-202ENST00000344627 COX6A2Q02221 97 aa7.91□□□□□ -1.14
SGCA-202ENST00000344627 RHEBQ15382 184 aa7.91□□□□□ -1.14
SGCA-202ENST00000344627 SS18Q15532 418 aa7.91□□□□□ -1.14
SGCA-202ENST00000344627 SLC7A5P1Q8MH63 180 aa7.91□□□□□ -1.14
SGCA-202ENST00000344627 ISOC2Q96AB3 205 aa7.91□□□□□ -1.14
SGCA-202ENST00000344627 ANAPC16Q96DE5 110 aa7.91□□□□□ -1.14
SGCA-202ENST00000344627 IGKV2-24A0A0C4DH68 120 aa7.9□□□□□ -1.14
SGCA-202ENST00000344627 C7orf77A4D0Y5 90 aa7.9□□□□□ -1.14
SGCA-202ENST00000344627 VCYO14598 125 aa7.9□□□□□ -1.14
SGCA-202ENST00000344627 POLR2KP53803 58 aaKnown RBP7.9□□□□□ -1.14
SGCA-202ENST00000344627 FOXI1Q12951 378 aa7.9□□□□□ -1.14
SGCA-202ENST00000344627 MAJINQ3KP22 176 aa7.9□□□□□ -1.14
SGCA-202ENST00000344627 CTDSP1Q9GZU7 261 aa7.9□□□□□ -1.14
SGCA-202ENST00000344627 NAT8BQ9UHF3 227 aa7.9□□□□□ -1.14
SGCA-202ENST00000344627 TRBV27A0A0K0K1C4 114 aa7.89□□□□□ -1.15
SGCA-202ENST00000344627 PPP1R17O96001 155 aa7.89□□□□□ -1.15
SGCA-202ENST00000344627 APOC3P02656 99 aa7.89□□□□□ -1.15
SGCA-202ENST00000344627 ADCYAP1P18509 176 aa7.89□□□□□ -1.15
SGCA-202ENST00000344627 CAMPP49913 170 aa7.89□□□□□ -1.15
SGCA-202ENST00000344627 ZNF664Q8N3J9 261 aa7.89□□□□□ -1.15
SGCA-202ENST00000344627 SPACA4Q8TDM5 124 aa7.89□□□□□ -1.15
SGCA-202ENST00000344627 C7orf33Q8WU49 177 aa7.89□□□□□ -1.15
SGCA-202ENST00000344627 LINC00526Q96FQ7 95 aa7.89□□□□□ -1.15
SGCA-202ENST00000344627 IGHV1-58A0A0C4DH39 117 aa7.88□□□□□ -1.15
SGCA-202ENST00000344627 S100A1P23297 94 aa7.88□□□□□ -1.15
SGCA-202ENST00000344627 HNRNPA3P51991 378 aaKnown RBP7.88□□□□□ -1.15
SGCA-202ENST00000344627 SMAGPQ0VAQ4 97 aa7.88□□□□□ -1.15
SGCA-202ENST00000344627 PRSS3P2Q8NHM4 247 aa7.88□□□□□ -1.15
SGCA-202ENST00000344627 KIR2DL4Q99706 377 aa7.88□□□□□ -1.15
SGCA-202ENST00000344627 CDC42SE2Q9NRR3 84 aa7.88□□□□□ -1.15
SGCA-202ENST00000344627 GVQW2A0A096LPI5 108 aaPredicted RBP7.87□□□□□ -1.15
SGCA-202ENST00000344627 ZNF561-AS1K7EIQ3 104 aa7.87□□□□□ -1.15
SGCA-202ENST00000344627 SUMO2P61956 95 aaKnown RBP7.87□□□□□ -1.15
SGCA-202ENST00000344627 MRPL51Q4U2R6 128 aaKnown RBP7.87□□□□□ -1.15
SGCA-202ENST00000344627 PLAC8Q9NZF1 115 aa7.87□□□□□ -1.15
SGCA-202ENST00000344627 MALP21145 153 aa7.86□□□□□ -1.15
SGCA-202ENST00000344627 CKS2P33552 79 aa7.86□□□□□ -1.15
SGCA-202ENST00000344627 RNASE13Q5GAN3 156 aaKnown RBP7.86□□□□□ -1.15
SGCA-202ENST00000344627 FAM104BQ5XKR9 115 aa7.86□□□□□ -1.15
SGCA-202ENST00000344627 CD164L2Q6UWJ8 174 aa7.86□□□□□ -1.15
SGCA-202ENST00000344627 MRPL52Q86TS9 123 aaKnown RBP7.86□□□□□ -1.15
SGCA-202ENST00000344627 STPG4Q8N801 248 aa7.86□□□□□ -1.15
SGCA-202ENST00000344627 NRACQ8N912 160 aa7.86□□□□□ -1.15
SGCA-202ENST00000344627 IMMP2LQ96T52 175 aa7.86□□□□□ -1.15
SGCA-202ENST00000344627 LINC00474Q9P2X8 69 aa7.86□□□□□ -1.15
SGCA-202ENST00000344627 TRAV13-1A0A0B4J241 112 aa7.85□□□□□ -1.15
SGCA-202ENST00000344627 SMIM27A0A1W2PRY6 76 aa7.85□□□□□ -1.15
SGCA-202ENST00000344627 PHOX2AO14813 284 aa7.85□□□□□ -1.15
SGCA-202ENST00000344627 S100PP25815 95 aa7.85□□□□□ -1.15
SGCA-202ENST00000344627 MRPL54Q6P161 138 aaKnown RBP7.85□□□□□ -1.15
SGCA-202ENST00000344627 TMEM18Q96B42 140 aa7.85□□□□□ -1.15
SGCA-202ENST00000344627 CARD19Q96LW7 228 aa7.85□□□□□ -1.15
SGCA-202ENST00000344627 TRAV9-1A0A075B6T8 112 aa7.84□□□□□ -1.15
SGCA-202ENST00000344627 A0A1B0GW15 77 aa7.84□□□□□ -1.15
SGCA-202ENST00000344627 A6NJY4 79 aa7.84□□□□□ -1.15
SGCA-202ENST00000344627 C1orf196B1AJZ1 125 aa7.84□□□□□ -1.15
SGCA-202ENST00000344627 COX7A2LO14548 114 aa7.84□□□□□ -1.15
SGCA-202ENST00000344627 RPS10P5Q9NQ39 176 aa7.84□□□□□ -1.15
SGCA-202ENST00000344627 A0A096LNI7 61 aa7.83□□□□□ -1.16
SGCA-202ENST00000344627 S100A8P05109 93 aa7.83□□□□□ -1.16
SGCA-202ENST00000344627 MT1HL1P0DM35 61 aa7.83□□□□□ -1.16
SGCA-202ENST00000344627 SYCNQ0VAF6 134 aa7.83□□□□□ -1.16
SGCA-202ENST00000344627 UBE2D4Q9Y2X8 147 aa7.83□□□□□ -1.16
SGCA-202ENST00000344627 ATP6V1G1O75348 118 aa7.82□□□□□ -1.16
SGCA-202ENST00000344627 TNFRSF6BO95407 300 aa7.82□□□□□ -1.16
SGCA-202ENST00000344627 HBBP68871 147 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms