RNA–Protein interactions for RNA: ENST00000339251.9

MUC4-202, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,777 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-202ENST00000339251 HERVK_113P63121 156 aa8.41□□□□□ -1.06
MUC4-202ENST00000339251 LINC00308Q8TCZ7 52 aa8.41□□□□□ -1.06
MUC4-202ENST00000339251 TMEM126AQ9H061 195 aa8.41□□□□□ -1.06
MUC4-202ENST00000339251 COX7A2LO14548 114 aa8.4□□□□□ -1.06
MUC4-202ENST00000339251 CSMD2Q7Z408 3487 aa8.4□□□□□ -1.06
MUC4-202ENST00000339251 INAFM2P0DMQ5 153 aa8.4□□□□□ -1.06
MUC4-202ENST00000339251 DAZ2Q13117 558 aaKnown RBP8.4□□□□□ -1.06
MUC4-202ENST00000339251 DAZ4Q86SG3 579 aaKnown RBP8.4□□□□□ -1.06
MUC4-202ENST00000339251 UBE2E2Q96LR5 201 aa8.4□□□□□ -1.06
MUC4-202ENST00000339251 DAZ3Q9NR90 486 aaKnown RBP8.4□□□□□ -1.06
MUC4-202ENST00000339251 SVEP1Q4LDE5 3571 aa8.4□□□□□ -1.07
MUC4-202ENST00000339251 CCDC168Q8NDH2 2452 aa8.4□□□□□ -1.07
MUC4-202ENST00000339251 LINC00158P58513 81 aa8.4□□□□□ -1.07
MUC4-202ENST00000339251 UBE2D4Q9Y2X8 147 aa8.4□□□□□ -1.07
MUC4-202ENST00000339251 IGLV1-40P01703 118 aa8.39□□□□□ -1.07
MUC4-202ENST00000339251 RPL36AP83881 106 aaKnown RBP8.39□□□□□ -1.07
MUC4-202ENST00000339251 RPL36ALQ969Q0 106 aaKnown RBP8.39□□□□□ -1.07
MUC4-202ENST00000339251 FAM240AA0A1B0GVK7 77 aa8.39□□□□□ -1.07
MUC4-202ENST00000339251 LINC00643Q86TS7 51 aa8.39□□□□□ -1.07
MUC4-202ENST00000339251 XCL2Q9UBD3 114 aa8.39□□□□□ -1.07
MUC4-202ENST00000339251 FLNBO75369 2602 aaKnown RBP8.39□□□□□ -1.07
MUC4-202ENST00000339251 HECTD1Q9ULT8 2610 aa8.39□□□□□ -1.07
MUC4-202ENST00000339251 LITAFQ99732 161 aa8.39□□□□□ -1.07
MUC4-202ENST00000339251 NDUFA1O15239 70 aa8.38□□□□□ -1.07
MUC4-202ENST00000339251 DEFB136Q30KP8 78 aa8.38□□□□□ -1.07
MUC4-202ENST00000339251 Q9HAA7 133 aa8.38□□□□□ -1.07
MUC4-202ENST00000339251 DEFB112Q30KQ8 113 aa8.38□□□□□ -1.07
MUC4-202ENST00000339251 INSP01308 110 aa8.38□□□□□ -1.07
MUC4-202ENST00000339251 CSMD1Q96PZ7 3565 aa8.38□□□□□ -1.07
MUC4-202ENST00000339251 IGHV4-30-2A0A087WSY4 118 aa8.37□□□□□ -1.07
MUC4-202ENST00000339251 B4DSR2 109 aa8.37□□□□□ -1.07
MUC4-202ENST00000339251 TIMM17BO60830 172 aa8.37□□□□□ -1.07
MUC4-202ENST00000339251 FAM110AQ9BQ89 295 aa8.37□□□□□ -1.07
MUC4-202ENST00000339251 Q9UF83 564 aa8.37□□□□□ -1.07
MUC4-202ENST00000339251 BBC3Q96PG8 261 aaPredicted RBP8.37□□□□□ -1.07
MUC4-202ENST00000339251 WNK1Q9H4A3 2382 aa8.36□□□□□ -1.07
MUC4-202ENST00000339251 SLURP1P55000 103 aa8.36□□□□□ -1.07
MUC4-202ENST00000339251 DNAJC30Q96LL9 226 aa8.36□□□□□ -1.07
MUC4-202ENST00000339251 CHCHD7Q9BUK0 85 aa8.36□□□□□ -1.07
MUC4-202ENST00000339251 CELSR2Q9HCU4 2923 aa8.36□□□□□ -1.07
MUC4-202ENST00000339251 GNLYP22749 145 aa8.36□□□□□ -1.07
MUC4-202ENST00000339251 Q6ZSN1 163 aa8.36□□□□□ -1.07
MUC4-202ENST00000339251 USP9YO00507 2555 aaPredicted RBP8.36□□□□□ -1.07
MUC4-202ENST00000339251 C19orf84I3L1E1 186 aa8.35□□□□□ -1.07
MUC4-202ENST00000339251 PIK3CD-AS1Q5SR53 167 aa8.35□□□□□ -1.07
MUC4-202ENST00000339251 C10orf105Q8TEF2 133 aa8.35□□□□□ -1.07
MUC4-202ENST00000339251 PRORYQ9H606 182 aa8.35□□□□□ -1.07
MUC4-202ENST00000339251 PEMTQ9UBM1 199 aa8.35□□□□□ -1.07
MUC4-202ENST00000339251 PAX4O43316 350 aa8.35□□□□□ -1.07
MUC4-202ENST00000339251 PSMB8P28062 276 aa8.35□□□□□ -1.07
MUC4-202ENST00000339251 TIRAPP58753 221 aa8.35□□□□□ -1.07
MUC4-202ENST00000339251 STHQ8IWL8 128 aa8.35□□□□□ -1.07
MUC4-202ENST00000339251 MAPK1IP1LQ8NDC0 245 aa8.35□□□□□ -1.07
MUC4-202ENST00000339251 MYO9AB2RTY4 2548 aa8.35□□□□□ -1.07
MUC4-202ENST00000339251 TRAV13-2A0A0B4J235 113 aa8.35□□□□□ -1.07
MUC4-202ENST00000339251 IGKV3D-7A0A0C4DH55 119 aa8.35□□□□□ -1.07
MUC4-202ENST00000339251 RNASE1P07998 156 aaKnown RBP8.35□□□□□ -1.07
MUC4-202ENST00000339251 CFHR3Q02985 330 aa8.35□□□□□ -1.07
MUC4-202ENST00000339251 COX6A2Q02221 97 aa8.34□□□□□ -1.07
MUC4-202ENST00000339251 C3orf22Q8N5N4 141 aa8.34□□□□□ -1.07
MUC4-202ENST00000339251 C11orf68Q9H3H3 251 aaKnown RBP8.34□□□□□ -1.07
MUC4-202ENST00000339251 NDUFA7O95182 113 aa8.34□□□□□ -1.07
MUC4-202ENST00000339251 IMUPQ9GZP8 106 aa8.34□□□□□ -1.08
MUC4-202ENST00000339251 TRGV2A0A075B6R0 118 aa8.33□□□□□ -1.08
MUC4-202ENST00000339251 TRBV7-7A0A0K0K1E9 115 aa8.33□□□□□ -1.08
MUC4-202ENST00000339251 PFN2P35080 140 aa8.33□□□□□ -1.08
MUC4-202ENST00000339251 UQCRQO14949 82 aa8.33□□□□□ -1.08
MUC4-202ENST00000339251 BRI3O95415 125 aa8.33□□□□□ -1.08
MUC4-202ENST00000339251 RBMY1A1P0DJD3 496 aaKnown RBP8.33□□□□□ -1.08
MUC4-202ENST00000339251 RBMY1CP0DJD4 496 aa8.33□□□□□ -1.08
MUC4-202ENST00000339251 RBMY1FQ15415 496 aaKnown RBP8.33□□□□□ -1.08
MUC4-202ENST00000339251 CITED2Q99967 270 aaPredicted RBP8.33□□□□□ -1.08
MUC4-202ENST00000339251 TRACP01848 142 aa8.33□□□□□ -1.08
MUC4-202ENST00000339251 HIST1H4AP62805 103 aaKnown RBP8.33□□□□□ -1.08
MUC4-202ENST00000339251 DOPEY1Q5JWR5 2465 aa8.32□□□□□ -1.08
MUC4-202ENST00000339251 MALP21145 153 aa8.32□□□□□ -1.08
MUC4-202ENST00000339251 SND1-IT1Q9HBX3 110 aa8.32□□□□□ -1.08
MUC4-202ENST00000339251 RBMY1BA6NDE4 496 aaKnown RBP8.32□□□□□ -1.08
MUC4-202ENST00000339251 RBMY1EA6NEQ0 496 aaKnown RBP8.32□□□□□ -1.08
MUC4-202ENST00000339251 RBMY1DP0C7P1 496 aaKnown RBP8.32□□□□□ -1.08
MUC4-202ENST00000339251 OVOL2Q9BRP0 275 aa8.32□□□□□ -1.08
MUC4-202ENST00000339251 LINC00694P0DN24 101 aa8.31□□□□□ -1.08
MUC4-202ENST00000339251 LINC00242Q5T6M2 205 aa8.31□□□□□ -1.08
MUC4-202ENST00000339251 Q8N2B8 174 aa8.31□□□□□ -1.08
MUC4-202ENST00000339251 MIR7-3HGQ8N6C7 128 aa8.31□□□□□ -1.08
MUC4-202ENST00000339251 SDIM1Q6ZPB5 146 aa8.31□□□□□ -1.08
MUC4-202ENST00000339251 C11orf44Q8N8P7 122 aa8.31□□□□□ -1.08
MUC4-202ENST00000339251 TMEM243Q9BU79 118 aa8.31□□□□□ -1.08
MUC4-202ENST00000339251 AVPP01185 164 aa8.31□□□□□ -1.08
MUC4-202ENST00000339251 HIST2H2BCQ6DN03 193 aa8.31□□□□□ -1.08
MUC4-202ENST00000339251 HIST2H2BDQ6DRA6 164 aa8.31□□□□□ -1.08
MUC4-202ENST00000339251 C14orf132Q9NPU4 83 aa8.31□□□□□ -1.08
MUC4-202ENST00000339251 TLN2Q9Y4G6 2542 aa8.3□□□□□ -1.08
MUC4-202ENST00000339251 GCN1Q92616 2671 aaKnown RBP8.3□□□□□ -1.08
MUC4-202ENST00000339251 A0A1B0GX51 115 aa8.3□□□□□ -1.08
MUC4-202ENST00000339251 A0A1W2PRX2 142 aa8.3□□□□□ -1.08
MUC4-202ENST00000339251 ATOX1O00244 68 aa8.3□□□□□ -1.08
MUC4-202ENST00000339251 ATP5G1P05496 136 aa8.3□□□□□ -1.08
MUC4-202ENST00000339251 KLK5Q9Y337 293 aaPredicted RBP8.3□□□□□ -1.08
MUC4-202ENST00000339251 TRGV4A0A0C4DH28 118 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms