RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 UBR4Q5T4S7 5183 aa14.77□□□□□ -0.04
TMEM54-201ENST00000329151 ZNF25P17030 456 aaPredicted RBP14.77□□□□□ -0.05
TMEM54-201ENST00000329151 FOXA3P55318 350 aaPredicted RBP14.77□□□□□ -0.05
TMEM54-201ENST00000329151 V9GYV3 84 aa14.76□□□□□ -0.05
TMEM54-201ENST00000329151 FAM231BA6NCW3 169 aa14.75□□□□□ -0.05
TMEM54-201ENST00000329151 I3L3M4 83 aa14.75□□□□□ -0.05
TMEM54-201ENST00000329151 STPG4Q8N801 248 aa14.75□□□□□ -0.05
TMEM54-201ENST00000329151 PRSS3P2Q8NHM4 247 aa14.75□□□□□ -0.05
TMEM54-201ENST00000329151 GVQW2A0A096LPI5 108 aaPredicted RBP14.74□□□□□ -0.05
TMEM54-201ENST00000329151 HIGD1CA8MV81 97 aa14.74□□□□□ -0.05
TMEM54-201ENST00000329151 XCL1P47992 114 aa14.74□□□□□ -0.05
TMEM54-201ENST00000329151 OR5A1Q8NGJ0 315 aa14.74□□□□□ -0.05
TMEM54-201ENST00000329151 LINC00474Q9P2X8 69 aa14.74□□□□□ -0.05
TMEM54-201ENST00000329151 MT1HL1P0DM35 61 aa14.72□□□□□ -0.05
TMEM54-201ENST00000329151 MRAP2Q96G30 205 aa14.72□□□□□ -0.05
TMEM54-201ENST00000329151 ST20Q9HBF5 79 aa14.72□□□□□ -0.05
TMEM54-201ENST00000329151 A0A1B0GUT8 65 aa14.71□□□□□ -0.05
TMEM54-201ENST00000329151 SS18Q15532 418 aa14.71□□□□□ -0.05
TMEM54-201ENST00000329151 IGHV1-58A0A0C4DH39 117 aa14.7□□□□□ -0.06
TMEM54-201ENST00000329151 CCL25O15444 150 aa14.69□□□□□ -0.06
TMEM54-201ENST00000329151 FOXI1Q12951 378 aa14.69□□□□□ -0.06
TMEM54-201ENST00000329151 NUP35Q8NFH5 326 aa14.69□□□□□ -0.06
TMEM54-201ENST00000329151 CARD19Q96LW7 228 aa14.69□□□□□ -0.06
TMEM54-201ENST00000329151 NAT8BQ9UHF3 227 aa14.69□□□□□ -0.06
TMEM54-201ENST00000329151 ZNF561-AS1K7EIQ3 104 aa14.68□□□□□ -0.06
TMEM54-201ENST00000329151 A0A096LNI7 61 aa14.67□□□□□ -0.06
TMEM54-201ENST00000329151 TRBV6-5A0A0K0K1A5 114 aa14.67□□□□□ -0.06
TMEM54-201ENST00000329151 PRR3P79522 188 aaKnown RBP14.67□□□□□ -0.06
TMEM54-201ENST00000329151 TMEM242Q9NWH2 141 aa14.67□□□□□ -0.06
TMEM54-201ENST00000329151 LINC00959A0A1B0GUT2 108 aa14.66□□□□□ -0.06
TMEM54-201ENST00000329151 SMIM27A0A1W2PRY6 76 aa14.66□□□□□ -0.06
TMEM54-201ENST00000329151 RIGQ13278 110 aa14.66□□□□□ -0.06
TMEM54-201ENST00000329151 SMAGPQ0VAQ4 97 aa14.65□□□□□ -0.06
TMEM54-201ENST00000329151 MALP21145 153 aa14.64□□□□□ -0.07
TMEM54-201ENST00000329151 PNRC1Q12796 327 aaPredicted RBP14.64□□□□□ -0.07
TMEM54-201ENST00000329151 UQCC3Q6UW78 93 aa14.64□□□□□ -0.07
TMEM54-201ENST00000329151 TMEM191AQ9H0A3 160 aa14.64□□□□□ -0.07
TMEM54-201ENST00000329151 C7orf77A4D0Y5 90 aa14.63□□□□□ -0.07
TMEM54-201ENST00000329151 TSHBP01222 138 aa14.63□□□□□ -0.07
TMEM54-201ENST00000329151 FCER1GP30273 86 aa14.63□□□□□ -0.07
TMEM54-201ENST00000329151 REG3GQ6UW15 175 aa14.63□□□□□ -0.07
TMEM54-201ENST00000329151 LINC00526Q96FQ7 95 aa14.63□□□□□ -0.07
TMEM54-201ENST00000329151 ESDP10768 282 aa14.62□□□□□ -0.07
TMEM54-201ENST00000329151 SYCNQ0VAF6 134 aa14.62□□□□□ -0.07
TMEM54-201ENST00000329151 CD164L2Q6UWJ8 174 aa14.62□□□□□ -0.07
TMEM54-201ENST00000329151 PPP1R2P9O14990 202 aa14.61□□□□□ -0.07
TMEM54-201ENST00000329151 ZNF664Q8N3J9 261 aa14.61□□□□□ -0.07
TMEM54-201ENST00000329151 MRPL52Q86TS9 123 aaKnown RBP14.6□□□□□ -0.07
TMEM54-201ENST00000329151 LINC01600Q96MT4 127 aa14.6□□□□□ -0.07
TMEM54-201ENST00000329151 CDC42SE2Q9NRR3 84 aa14.6□□□□□ -0.07
TMEM54-201ENST00000329151 PPP1R17O96001 155 aa14.59□□□□□ -0.07
TMEM54-201ENST00000329151 CAMPP49913 170 aa14.59□□□□□ -0.07
TMEM54-201ENST00000329151 SPINK6Q6UWN8 80 aa14.59□□□□□ -0.07
TMEM54-201ENST00000329151 AMN1Q8IY45 258 aa14.59□□□□□ -0.07
TMEM54-201ENST00000329151 TMEM218A2RU14 115 aa14.58□□□□□ -0.08
TMEM54-201ENST00000329151 C1orf196B1AJZ1 125 aa14.58□□□□□ -0.08
TMEM54-201ENST00000329151 MT-ND4LP03901 98 aa14.58□□□□□ -0.08
TMEM54-201ENST00000329151 RAB4AP20338 218 aa14.58□□□□□ -0.08
TMEM54-201ENST00000329151 Q6ZRP5 223 aa14.58□□□□□ -0.08
TMEM54-201ENST00000329151 COMMD7Q86VX2 200 aa14.58□□□□□ -0.08
TMEM54-201ENST00000329151 TRBV27A0A0K0K1C4 114 aa14.57□□□□□ -0.08
TMEM54-201ENST00000329151 LOC107984640A0A0U1RRK4 108 aa14.57□□□□□ -0.08
TMEM54-201ENST00000329151 A0A1B0GW15 77 aa14.57□□□□□ -0.08
TMEM54-201ENST00000329151 COX7A2LO14548 114 aa14.57□□□□□ -0.08
TMEM54-201ENST00000329151 VCYO14598 125 aa14.57□□□□□ -0.08
TMEM54-201ENST00000329151 GAS8-AS1O95177 125 aa14.57□□□□□ -0.08
TMEM54-201ENST00000329151 GAGE2BQ13066 116 aa14.57□□□□□ -0.08
TMEM54-201ENST00000329151 KIR2DL4Q99706 377 aa14.57□□□□□ -0.08
TMEM54-201ENST00000329151 F8W036 122 aa14.56□□□□□ -0.08
TMEM54-201ENST00000329151 POLR2KP53803 58 aaKnown RBP14.56□□□□□ -0.08
TMEM54-201ENST00000329151 ANAPC16Q96DE5 110 aa14.56□□□□□ -0.08
TMEM54-201ENST00000329151 ADCYAP1P18509 176 aa14.55□□□□□ -0.08
TMEM54-201ENST00000329151 MRPL54Q6P161 138 aaKnown RBP14.55□□□□□ -0.08
TMEM54-201ENST00000329151 S100A8P05109 93 aa14.54□□□□□ -0.08
TMEM54-201ENST00000329151 TMEM18Q96B42 140 aa14.54□□□□□ -0.08
TMEM54-201ENST00000329151 CAMK2N2Q96S95 79 aa14.54□□□□□ -0.08
TMEM54-201ENST00000329151 TNXBP22105 4242 aa14.54□□□□□ -0.08
TMEM54-201ENST00000329151 IGLV4-69A0A075B6H9 119 aa14.53□□□□□ -0.08
TMEM54-201ENST00000329151 A0A0J9YXV3 536 aa14.53□□□□□ -0.08
TMEM54-201ENST00000329151 LINC00862A6NCI5 91 aa14.53□□□□□ -0.08
TMEM54-201ENST00000329151 APOMO95445 188 aa14.53□□□□□ -0.08
TMEM54-201ENST00000329151 PTTG1IPP53801 180 aa14.53□□□□□ -0.08
TMEM54-201ENST00000329151 HBBP68871 147 aa14.53□□□□□ -0.08
TMEM54-201ENST00000329151 FAM104BQ5XKR9 115 aa14.53□□□□□ -0.08
TMEM54-201ENST00000329151 TRAV13-1A0A0B4J241 112 aa14.52□□□□□ -0.09
TMEM54-201ENST00000329151 SMKR1H3BMG3 65 aa14.52□□□□□ -0.09
TMEM54-201ENST00000329151 A0A1B0GXF2 115 aa14.51□□□□□ -0.09
TMEM54-201ENST00000329151 SUMO2P61956 95 aaKnown RBP14.51□□□□□ -0.09
TMEM54-201ENST00000329151 ATP5L2Q7Z4Y8 100 aa14.51□□□□□ -0.09
TMEM54-201ENST00000329151 SEC11CQ9BY50 192 aa14.51□□□□□ -0.09
TMEM54-201ENST00000329151 MRPL51Q4U2R6 128 aaKnown RBP14.5□□□□□ -0.09
TMEM54-201ENST00000329151 CSDC2Q9Y534 153 aaKnown RBP14.5□□□□□ -0.09
TMEM54-201ENST00000329151 RPL18AQ02543 176 aaKnown RBP14.49□□□□□ -0.09
TMEM54-201ENST00000329151 RNASE13Q5GAN3 156 aaKnown RBP14.49□□□□□ -0.09
TMEM54-201ENST00000329151 UBE2D4Q9Y2X8 147 aa14.48□□□□□ -0.09
TMEM54-201ENST00000329151 MT-ND6P03923 174 aa14.47□□□□□ -0.09
TMEM54-201ENST00000329151 C5orf38Q86SI9 138 aa14.47□□□□□ -0.09
TMEM54-201ENST00000329151 NRACQ8N912 160 aa14.47□□□□□ -0.09
TMEM54-201ENST00000329151 C2orf48Q96LS8 159 aa14.47□□□□□ -0.09
TMEM54-201ENST00000329151 TCAPO15273 167 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms