RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 LINC00474Q9P2X8 69 aa10.98□□□□□ -0.65
TFF3-201ENST00000291525 ZNF727A8MUV8 499 aa10.97□□□□□ -0.65
TFF3-201ENST00000291525 PHOX2AO14813 284 aa10.97□□□□□ -0.65
TFF3-201ENST00000291525 CCL25O15444 150 aa10.97□□□□□ -0.65
TFF3-201ENST00000291525 TSHBP01222 138 aa10.97□□□□□ -0.65
TFF3-201ENST00000291525 SMAGPQ0VAQ4 97 aa10.97□□□□□ -0.65
TFF3-201ENST00000291525 PRSS3P2Q8NHM4 247 aa10.97□□□□□ -0.65
TFF3-201ENST00000291525 C7orf77A4D0Y5 90 aa10.96□□□□□ -0.65
TFF3-201ENST00000291525 PPP1R17O96001 155 aa10.96□□□□□ -0.65
TFF3-201ENST00000291525 MRPL52Q86TS9 123 aaKnown RBP10.96□□□□□ -0.65
TFF3-201ENST00000291525 STPG4Q8N801 248 aa10.96□□□□□ -0.65
TFF3-201ENST00000291525 hCG_2014768A0A024R1R8 64 aa10.95□□□□□ -0.66
TFF3-201ENST00000291525 TRBV27A0A0K0K1C4 114 aa10.95□□□□□ -0.66
TFF3-201ENST00000291525 RAB4AP20338 218 aa10.95□□□□□ -0.66
TFF3-201ENST00000291525 POLR2KP53803 58 aaKnown RBP10.95□□□□□ -0.66
TFF3-201ENST00000291525 RIGQ13278 110 aa10.95□□□□□ -0.66
TFF3-201ENST00000291525 FCER1GP30273 86 aa10.94□□□□□ -0.66
TFF3-201ENST00000291525 CD164L2Q6UWJ8 174 aa10.94□□□□□ -0.66
TFF3-201ENST00000291525 AMN1Q8IY45 258 aa10.94□□□□□ -0.66
TFF3-201ENST00000291525 ZNF664Q8N3J9 261 aa10.94□□□□□ -0.66
TFF3-201ENST00000291525 CARD19Q96LW7 228 aa10.94□□□□□ -0.66
TFF3-201ENST00000291525 CDC42SE2Q9NRR3 84 aa10.94□□□□□ -0.66
TFF3-201ENST00000291525 ZNF561-AS1K7EIQ3 104 aa10.93□□□□□ -0.66
TFF3-201ENST00000291525 VCYO14598 125 aa10.93□□□□□ -0.66
TFF3-201ENST00000291525 GAS8-AS1O95177 125 aa10.93□□□□□ -0.66
TFF3-201ENST00000291525 MT1HL1P0DM35 61 aa10.93□□□□□ -0.66
TFF3-201ENST00000291525 A0A096LNI7 61 aa10.92□□□□□ -0.66
TFF3-201ENST00000291525 SRP19P09132 144 aaKnown RBP10.92□□□□□ -0.66
TFF3-201ENST00000291525 ISOC2Q96AB3 205 aa10.92□□□□□ -0.66
TFF3-201ENST00000291525 PPP1R2P9O14990 202 aa10.91□□□□□ -0.66
TFF3-201ENST00000291525 PRR3P79522 188 aaKnown RBP10.91□□□□□ -0.66
TFF3-201ENST00000291525 FAM74A3Q4VXF1 159 aa10.91□□□□□ -0.66
TFF3-201ENST00000291525 KIR2DL4Q99706 377 aa10.91□□□□□ -0.66
TFF3-201ENST00000291525 NAT8BQ9UHF3 227 aa10.91□□□□□ -0.66
TFF3-201ENST00000291525 V9GYV3 84 aa10.91□□□□□ -0.66
TFF3-201ENST00000291525 C1orf196B1AJZ1 125 aa10.9□□□□□ -0.66
TFF3-201ENST00000291525 MALP21145 153 aa10.9□□□□□ -0.66
TFF3-201ENST00000291525 SUMO2P61956 95 aaKnown RBP10.9□□□□□ -0.66
TFF3-201ENST00000291525 SYCNQ0VAF6 134 aa10.9□□□□□ -0.66
TFF3-201ENST00000291525 NUP35Q8NFH5 326 aa10.9□□□□□ -0.66
TFF3-201ENST00000291525 CSDC2Q9Y534 153 aaKnown RBP10.9□□□□□ -0.66
TFF3-201ENST00000291525 HMCN2Q8NDA2 5059 aa10.9□□□□□ -0.67
TFF3-201ENST00000291525 CAMPP49913 170 aa10.89□□□□□ -0.67
TFF3-201ENST00000291525 TMEM241Q24JQ0 296 aa10.89□□□□□ -0.67
TFF3-201ENST00000291525 TMEM18Q96B42 140 aa10.89□□□□□ -0.67
TFF3-201ENST00000291525 LINC00526Q96FQ7 95 aa10.89□□□□□ -0.67
TFF3-201ENST00000291525 SMKR1H3BMG3 65 aa10.88□□□□□ -0.67
TFF3-201ENST00000291525 COX7A2LO14548 114 aa10.88□□□□□ -0.67
TFF3-201ENST00000291525 NRACQ8N912 160 aa10.87□□□□□ -0.67
TFF3-201ENST00000291525 UBE2D4Q9Y2X8 147 aa10.87□□□□□ -0.67
TFF3-201ENST00000291525 LOC107984640A0A0U1RRK4 108 aa10.86□□□□□ -0.67
TFF3-201ENST00000291525 A0A1B0GW15 77 aa10.86□□□□□ -0.67
TFF3-201ENST00000291525 TCAPO15273 167 aa10.86□□□□□ -0.67
TFF3-201ENST00000291525 ADIRFQ15847 76 aa10.86□□□□□ -0.67
TFF3-201ENST00000291525 IGLV4-69A0A075B6H9 119 aa10.85□□□□□ -0.67
TFF3-201ENST00000291525 LINC00862A6NCI5 91 aa10.85□□□□□ -0.67
TFF3-201ENST00000291525 APOMO95445 188 aa10.85□□□□□ -0.67
TFF3-201ENST00000291525 RPL23P62829 140 aaKnown RBP10.85□□□□□ -0.67
TFF3-201ENST00000291525 FAM104BQ5XKR9 115 aa10.85□□□□□ -0.67
TFF3-201ENST00000291525 TIMM21Q9BVV7 248 aa10.85□□□□□ -0.67
TFF3-201ENST00000291525 NAT8Q9UHE5 227 aa10.85□□□□□ -0.67
TFF3-201ENST00000291525 TRAV13-1A0A0B4J241 112 aa10.84□□□□□ -0.67
TFF3-201ENST00000291525 PTTG1IPP53801 180 aa10.84□□□□□ -0.67
TFF3-201ENST00000291525 MRPL51Q4U2R6 128 aaKnown RBP10.84□□□□□ -0.67
TFF3-201ENST00000291525 REG3GQ6UW15 175 aa10.84□□□□□ -0.67
TFF3-201ENST00000291525 SPINK6Q6UWN8 80 aa10.84□□□□□ -0.67
TFF3-201ENST00000291525 Q6ZRP5 223 aa10.84□□□□□ -0.67
TFF3-201ENST00000291525 LINC01600Q96MT4 127 aa10.84□□□□□ -0.67
TFF3-201ENST00000291525 CAMK2N2Q96S95 79 aa10.84□□□□□ -0.67
TFF3-201ENST00000291525 C20orf78Q9BR46 151 aa10.84□□□□□ -0.67
TFF3-201ENST00000291525 SMIM27A0A1W2PRY6 76 aa10.83□□□□□ -0.68
TFF3-201ENST00000291525 S100A8P05109 93 aa10.83□□□□□ -0.68
TFF3-201ENST00000291525 GAGE2BQ13066 116 aa10.83□□□□□ -0.68
TFF3-201ENST00000291525 CKS2P33552 79 aa10.82□□□□□ -0.68
TFF3-201ENST00000291525 RPL32P62910 135 aaKnown RBP10.82□□□□□ -0.68
TFF3-201ENST00000291525 PEA15Q15121 130 aa10.82□□□□□ -0.68
TFF3-201ENST00000291525 RNASE13Q5GAN3 156 aaKnown RBP10.82□□□□□ -0.68
TFF3-201ENST00000291525 Q6ZUT4 128 aa10.82□□□□□ -0.68
TFF3-201ENST00000291525 C2orf48Q96LS8 159 aa10.82□□□□□ -0.68
TFF3-201ENST00000291525 TRBV24-1A0A075B6N3 115 aa10.81□□□□□ -0.68
TFF3-201ENST00000291525 F8W036 122 aa10.81□□□□□ -0.68
TFF3-201ENST00000291525 SMDT1Q9H4I9 107 aa10.81□□□□□ -0.68
TFF3-201ENST00000291525 SPAG11BQ08648 103 aa10.79□□□□□ -0.68
TFF3-201ENST00000291525 C5orf38Q86SI9 138 aa10.79□□□□□ -0.68
TFF3-201ENST00000291525 OR10D4PQ8NGN7 298 aa10.79□□□□□ -0.68
TFF3-201ENST00000291525 SPANXA1Q9NS26 97 aa10.79□□□□□ -0.68
TFF3-201ENST00000291525 A0A0J9YXV3 536 aa10.78□□□□□ -0.68
TFF3-201ENST00000291525 TNFRSF6BO95407 300 aa10.78□□□□□ -0.68
TFF3-201ENST00000291525 HBBP68871 147 aa10.78□□□□□ -0.68
TFF3-201ENST00000291525 RPL18AQ02543 176 aaKnown RBP10.78□□□□□ -0.68
TFF3-201ENST00000291525 SMIM2Q9BVW6 85 aa10.78□□□□□ -0.68
TFF3-201ENST00000291525 F8WDY8 70 aa10.77□□□□□ -0.69
TFF3-201ENST00000291525 RNF151Q2KHN1 245 aa10.77□□□□□ -0.69
TFF3-201ENST00000291525 C9JQL5 133 aa10.76□□□□□ -0.69
TFF3-201ENST00000291525 D6R8Y8 96 aa10.76□□□□□ -0.69
TFF3-201ENST00000291525 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.76□□□□□ -0.69
TFF3-201ENST00000291525 PPBPP02775 128 aa10.76□□□□□ -0.69
TFF3-201ENST00000291525 RPL39P62891 51 aaKnown RBP10.76□□□□□ -0.69
TFF3-201ENST00000291525 MRPL54Q6P161 138 aaKnown RBP10.76□□□□□ -0.69
TFF3-201ENST00000291525 MRPS36P82909 103 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms