RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 LINC00959A0A1B0GUT2 108 aa7.75□□□□□ -1.17
TRAF4-202ENST00000262396 C7orf77A4D0Y5 90 aa7.75□□□□□ -1.17
TRAF4-202ENST00000262396 FOXI1Q12951 378 aa7.75□□□□□ -1.17
TRAF4-202ENST00000262396 RIGQ13278 110 aa7.75□□□□□ -1.17
TRAF4-202ENST00000262396 CT83Q5H943 113 aa7.75□□□□□ -1.17
TRAF4-202ENST00000262396 FAM210AQ96ND0 272 aa7.75□□□□□ -1.17
TRAF4-202ENST00000262396 TRBV6-5A0A0K0K1A5 114 aa7.74□□□□□ -1.17
TRAF4-202ENST00000262396 ZNF727A8MUV8 499 aa7.74□□□□□ -1.17
TRAF4-202ENST00000262396 HIGD1CA8MV81 97 aa7.74□□□□□ -1.17
TRAF4-202ENST00000262396 A0A096LNI7 61 aa7.73□□□□□ -1.17
TRAF4-202ENST00000262396 VCYO14598 125 aa7.73□□□□□ -1.17
TRAF4-202ENST00000262396 PPP1R17O96001 155 aa7.73□□□□□ -1.17
TRAF4-202ENST00000262396 SYCNQ0VAF6 134 aa7.73□□□□□ -1.17
TRAF4-202ENST00000262396 ZNF664Q8N3J9 261 aa7.73□□□□□ -1.17
TRAF4-202ENST00000262396 TSKUQ8WUA8 353 aa7.73□□□□□ -1.17
TRAF4-202ENST00000262396 TMEM18Q96B42 140 aa7.73□□□□□ -1.17
TRAF4-202ENST00000262396 LINC00526Q96FQ7 95 aa7.73□□□□□ -1.17
TRAF4-202ENST00000262396 KIR2DL4Q99706 377 aa7.73□□□□□ -1.17
TRAF4-202ENST00000262396 TMEM191AQ9H0A3 160 aa7.73□□□□□ -1.17
TRAF4-202ENST00000262396 HMCN2Q8NDA2 5059 aa7.72□□□□□ -1.17
TRAF4-202ENST00000262396 TSHBP01222 138 aa7.72□□□□□ -1.17
TRAF4-202ENST00000262396 GAGE2BQ13066 116 aa7.72□□□□□ -1.17
TRAF4-202ENST00000262396 REG3GQ6UW15 175 aa7.72□□□□□ -1.17
TRAF4-202ENST00000262396 CD164L2Q6UWJ8 174 aa7.72□□□□□ -1.17
TRAF4-202ENST00000262396 AMN1Q8IY45 258 aa7.72□□□□□ -1.17
TRAF4-202ENST00000262396 FAM231BA6NCW3 169 aa7.71□□□□□ -1.18
TRAF4-202ENST00000262396 C1orf196B1AJZ1 125 aa7.71□□□□□ -1.18
TRAF4-202ENST00000262396 COX7A2LO14548 114 aa7.71□□□□□ -1.18
TRAF4-202ENST00000262396 CAMPP49913 170 aa7.71□□□□□ -1.18
TRAF4-202ENST00000262396 PRR3P79522 188 aaKnown RBP7.71□□□□□ -1.18
TRAF4-202ENST00000262396 CAMK2N2Q96S95 79 aa7.71□□□□□ -1.18
TRAF4-202ENST00000262396 CDC42SE2Q9NRR3 84 aa7.71□□□□□ -1.18
TRAF4-202ENST00000262396 PKHD1L1Q86WI1 4243 aa7.7□□□□□ -1.18
TRAF4-202ENST00000262396 TRAV13-1A0A0B4J241 112 aa7.7□□□□□ -1.18
TRAF4-202ENST00000262396 LOC107984640A0A0U1RRK4 108 aa7.7□□□□□ -1.18
TRAF4-202ENST00000262396 SMKR1H3BMG3 65 aa7.7□□□□□ -1.18
TRAF4-202ENST00000262396 APOMO95445 188 aa7.7□□□□□ -1.18
TRAF4-202ENST00000262396 ESDP10768 282 aa7.7□□□□□ -1.18
TRAF4-202ENST00000262396 RAB4AP20338 218 aa7.7□□□□□ -1.18
TRAF4-202ENST00000262396 MRPL52Q86TS9 123 aaKnown RBP7.7□□□□□ -1.18
TRAF4-202ENST00000262396 LINC01551Q86U37 167 aa7.7□□□□□ -1.18
TRAF4-202ENST00000262396 OSTCQ9NRP0 149 aa7.7□□□□□ -1.18
TRAF4-202ENST00000262396 TRBV27A0A0K0K1C4 114 aa7.69□□□□□ -1.18
TRAF4-202ENST00000262396 PPP1R2P9O14990 202 aa7.69□□□□□ -1.18
TRAF4-202ENST00000262396 GAS8-AS1O95177 125 aa7.69□□□□□ -1.18
TRAF4-202ENST00000262396 MT1HL1P0DM35 61 aa7.69□□□□□ -1.18
TRAF4-202ENST00000262396 Q6ZRP5 223 aa7.69□□□□□ -1.18
TRAF4-202ENST00000262396 IGLV4-69A0A075B6H9 119 aa7.68□□□□□ -1.18
TRAF4-202ENST00000262396 POLR2KP53803 58 aaKnown RBP7.68□□□□□ -1.18
TRAF4-202ENST00000262396 SUMO2P61956 95 aaKnown RBP7.68□□□□□ -1.18
TRAF4-202ENST00000262396 RPL18AQ02543 176 aaKnown RBP7.68□□□□□ -1.18
TRAF4-202ENST00000262396 ADIRFQ15847 76 aa7.68□□□□□ -1.18
TRAF4-202ENST00000262396 TMEM241Q24JQ0 296 aa7.68□□□□□ -1.18
TRAF4-202ENST00000262396 RNASE13Q5GAN3 156 aaKnown RBP7.68□□□□□ -1.18
TRAF4-202ENST00000262396 SPINK6Q6UWN8 80 aa7.68□□□□□ -1.18
TRAF4-202ENST00000262396 NAT8BQ9UHF3 227 aa7.68□□□□□ -1.18
TRAF4-202ENST00000262396 UBR4Q5T4S7 5183 aa7.68□□□□□ -1.18
TRAF4-202ENST00000262396 CKS2P33552 79 aa7.67□□□□□ -1.18
TRAF4-202ENST00000262396 C5orf38Q86SI9 138 aa7.67□□□□□ -1.18
TRAF4-202ENST00000262396 NUP35Q8NFH5 326 aa7.67□□□□□ -1.18
TRAF4-202ENST00000262396 TCAPO15273 167 aa7.66□□□□□ -1.18
TRAF4-202ENST00000262396 MT-ND6P03923 174 aa7.66□□□□□ -1.18
TRAF4-202ENST00000262396 SRP19P09132 144 aaKnown RBP7.66□□□□□ -1.18
TRAF4-202ENST00000262396 PTTG1IPP53801 180 aa7.66□□□□□ -1.18
TRAF4-202ENST00000262396 FAM74A3Q4VXF1 159 aa7.66□□□□□ -1.18
TRAF4-202ENST00000262396 LINC01600Q96MT4 127 aa7.66□□□□□ -1.18
TRAF4-202ENST00000262396 SPAG11BQ08648 103 aa7.65□□□□□ -1.18
TRAF4-202ENST00000262396 UBE2D4Q9Y2X8 147 aa7.65□□□□□ -1.18
TRAF4-202ENST00000262396 V9GYV3 84 aa7.65□□□□□ -1.18
TRAF4-202ENST00000262396 F8W036 122 aa7.64□□□□□ -1.19
TRAF4-202ENST00000262396 S100A8P05109 93 aa7.64□□□□□ -1.19
TRAF4-202ENST00000262396 Q6ZUT4 128 aa7.64□□□□□ -1.19
TRAF4-202ENST00000262396 CSDC2Q9Y534 153 aaKnown RBP7.64□□□□□ -1.19
TRAF4-202ENST00000262396 A0A0J9YXV3 536 aa7.63□□□□□ -1.19
TRAF4-202ENST00000262396 A0A1B0GW15 77 aa7.63□□□□□ -1.19
TRAF4-202ENST00000262396 LINC00862A6NCI5 91 aa7.63□□□□□ -1.19
TRAF4-202ENST00000262396 PEA15Q15121 130 aa7.63□□□□□ -1.19
TRAF4-202ENST00000262396 MRPL51Q4U2R6 128 aaKnown RBP7.63□□□□□ -1.19
TRAF4-202ENST00000262396 FAM104BQ5XKR9 115 aa7.63□□□□□ -1.19
TRAF4-202ENST00000262396 C2orf48Q96LS8 159 aa7.63□□□□□ -1.19
TRAF4-202ENST00000262396 C20orf78Q9BR46 151 aa7.63□□□□□ -1.19
TRAF4-202ENST00000262396 NAT8Q9UHE5 227 aa7.63□□□□□ -1.19
TRAF4-202ENST00000262396 RAB5AP20339 215 aa7.62□□□□□ -1.19
TRAF4-202ENST00000262396 RAB14P61106 215 aa7.62□□□□□ -1.19
TRAF4-202ENST00000262396 RPL23P62829 140 aaKnown RBP7.62□□□□□ -1.19
TRAF4-202ENST00000262396 C9orf116Q5BN46 136 aaPredicted RBP7.62□□□□□ -1.19
TRAF4-202ENST00000262396 NRACQ8N912 160 aa7.62□□□□□ -1.19
TRAF4-202ENST00000262396 ORAOV1Q8WV07 137 aa7.62□□□□□ -1.19
TRAF4-202ENST00000262396 OPRPNQ99935 248 aaPredicted RBP7.62□□□□□ -1.19
TRAF4-202ENST00000262396 IFITM10A6NMD0 228 aa7.61□□□□□ -1.19
TRAF4-202ENST00000262396 HBBP68871 147 aa7.61□□□□□ -1.19
TRAF4-202ENST00000262396 C1orf137Q5JT78 98 aa7.61□□□□□ -1.19
TRAF4-202ENST00000262396 MRPL54Q6P161 138 aaKnown RBP7.61□□□□□ -1.19
TRAF4-202ENST00000262396 OR10D4PQ8NGN7 298 aa7.61□□□□□ -1.19
TRAF4-202ENST00000262396 IMMP2LQ96T52 175 aa7.61□□□□□ -1.19
TRAF4-202ENST00000262396 TIMM21Q9BVV7 248 aa7.61□□□□□ -1.19
TRAF4-202ENST00000262396 TGIF2-C20orf24A0A0A6YYL0 155 aa7.6□□□□□ -1.19
TRAF4-202ENST00000262396 NDUFA1O15239 70 aa7.6□□□□□ -1.19
TRAF4-202ENST00000262396 TNFRSF6BO95407 300 aa7.6□□□□□ -1.19
TRAF4-202ENST00000262396 SPANXA1Q9NS26 97 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms