RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 PI16Q6UXB8 463 aa19.43■□□□□ 0.7
SMG9-208ENST00000598886 ANKRD23Q86SG2 305 aa19.43■□□□□ 0.7
SMG9-208ENST00000598886 ZNF333Q96JL9 665 aa19.43■□□□□ 0.7
SMG9-208ENST00000598886 HMG20BQ9P0W2 317 aa19.43■□□□□ 0.7
SMG9-208ENST00000598886 PTCH2Q9Y6C5 1203 aa19.43■□□□□ 0.7
SMG9-208ENST00000598886 GNAI2P04899 355 aa19.42■□□□□ 0.7
SMG9-208ENST00000598886 ARID4AP29374 1257 aaPredicted RBP19.42■□□□□ 0.7
SMG9-208ENST00000598886 MECOMQ03112 1051 aa19.42■□□□□ 0.7
SMG9-208ENST00000598886 MVPQ14764 893 aaKnown RBP19.42■□□□□ 0.7
SMG9-208ENST00000598886 AKAP2Q9Y2D5 859 aa19.42■□□□□ 0.7
SMG9-208ENST00000598886 GPR75-ASB3A0A0A6YYF3 556 aa19.41■□□□□ 0.7
SMG9-208ENST00000598886 DDTLA6NHG4 134 aaPredicted RBP19.41■□□□□ 0.7
SMG9-208ENST00000598886 IPO8O15397 1037 aaKnown RBP19.41■□□□□ 0.7
SMG9-208ENST00000598886 GPAT2Q6NUI2 795 aa19.41■□□□□ 0.7
SMG9-208ENST00000598886 TMEM57Q8N5G2 664 aa19.41■□□□□ 0.7
SMG9-208ENST00000598886 CLUAP1Q96AJ1 413 aa19.41■□□□□ 0.7
SMG9-208ENST00000598886 BTDP43251 543 aa19.4■□□□□ 0.7
SMG9-208ENST00000598886 POLA2Q14181 598 aa19.4■□□□□ 0.7
SMG9-208ENST00000598886 DZIP1Q86YF9 867 aaKnown RBP19.4■□□□□ 0.7
SMG9-208ENST00000598886 ABCF2Q9UG63 623 aa19.4■□□□□ 0.7
SMG9-208ENST00000598886 NPM3O75607 178 aaKnown RBP19.39■□□□□ 0.69
SMG9-208ENST00000598886 MCAMP43121 646 aa19.39■□□□□ 0.69
SMG9-208ENST00000598886 SCYL3Q8IZE3 742 aa19.39■□□□□ 0.69
SMG9-208ENST00000598886 SPATA5Q8NB90 893 aa19.39■□□□□ 0.69
SMG9-208ENST00000598886 FRAT1Q92837 279 aaPredicted RBP19.39■□□□□ 0.69
SMG9-208ENST00000598886 NSUN4Q96CB9 384 aaKnown RBP19.39■□□□□ 0.69
SMG9-208ENST00000598886 PDHXO00330 501 aa19.38■□□□□ 0.69
SMG9-208ENST00000598886 CXCL11O14625 94 aa19.38■□□□□ 0.69
SMG9-208ENST00000598886 PTPRAP18433 802 aa19.38■□□□□ 0.69
SMG9-208ENST00000598886 EN2P19622 333 aaPredicted RBP19.38■□□□□ 0.69
SMG9-208ENST00000598886 SPTY2D1Q68D10 685 aaPredicted RBP19.38■□□□□ 0.69
SMG9-208ENST00000598886 TBC1D9Q6ZT07 1266 aa19.38■□□□□ 0.69
SMG9-208ENST00000598886 SSH3Q8TE77 659 aa19.38■□□□□ 0.69
SMG9-208ENST00000598886 A0A0G2JLL6 359 aaPredicted RBP19.37■□□□□ 0.69
SMG9-208ENST00000598886 BCRP11274 1271 aa19.37■□□□□ 0.69
SMG9-208ENST00000598886 PRRT2Q7Z6L0 340 aaPredicted RBP19.37■□□□□ 0.69
SMG9-208ENST00000598886 TRIM47Q96LD4 638 aa19.37■□□□□ 0.69
SMG9-208ENST00000598886 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.37■□□□□ 0.69
SMG9-208ENST00000598886 CPA4Q9UI42 421 aa19.37■□□□□ 0.69
SMG9-208ENST00000598886 AFG3L2Q9Y4W6 797 aa19.37■□□□□ 0.69
SMG9-208ENST00000598886 GNRH1P01148 92 aa19.36■□□□□ 0.69
SMG9-208ENST00000598886 RLBP1P12271 317 aa19.36■□□□□ 0.69
SMG9-208ENST00000598886 ZKSCAN2Q63HK3 967 aa19.36■□□□□ 0.69
SMG9-208ENST00000598886 ERICH6Q7L0X2 663 aa19.36■□□□□ 0.69
SMG9-208ENST00000598886 SLF2Q8IX21 1173 aa19.36■□□□□ 0.69
SMG9-208ENST00000598886 NEUROD6Q96NK8 337 aa19.36■□□□□ 0.69
SMG9-208ENST00000598886 GPR108Q9NPR9 543 aa19.36■□□□□ 0.69
SMG9-208ENST00000598886 PICALMQ13492 652 aa19.35■□□□□ 0.69
SMG9-208ENST00000598886 ARHGEF6Q15052 776 aa19.35■□□□□ 0.69
SMG9-208ENST00000598886 SLC9C1Q4G0N8 1177 aa19.35■□□□□ 0.69
SMG9-208ENST00000598886 DDX60LQ5H9U9 1706 aaKnown RBP19.34■□□□□ 0.69
SMG9-208ENST00000598886 TBC1D12O60347 775 aa19.34■□□□□ 0.69
SMG9-208ENST00000598886 CTNND1O60716 968 aaKnown RBP19.34■□□□□ 0.69
SMG9-208ENST00000598886 SH3TC2Q8TF17 1288 aa19.34■□□□□ 0.69
SMG9-208ENST00000598886 ZHX2Q9Y6X8 837 aa19.34■□□□□ 0.69
SMG9-208ENST00000598886 MAP4K4O95819 1239 aaPredicted RBP19.33■□□□□ 0.68
SMG9-208ENST00000598886 CYP2C8P10632 490 aa19.33■□□□□ 0.68
SMG9-208ENST00000598886 PRMT2P55345 433 aa19.33■□□□□ 0.68
SMG9-208ENST00000598886 ATP8B2P98198 1209 aa19.33■□□□□ 0.68
SMG9-208ENST00000598886 RRP1BQ14684 758 aaKnown RBP19.33■□□□□ 0.68
SMG9-208ENST00000598886 TNNI3KQ59H18 835 aa19.33■□□□□ 0.68
SMG9-208ENST00000598886 MIER1Q8N108 512 aa19.33■□□□□ 0.68
SMG9-208ENST00000598886 DBNDD2Q9BQY9 259 aa19.33■□□□□ 0.68
SMG9-208ENST00000598886 SRRDQ9UH36 339 aa19.33■□□□□ 0.68
SMG9-208ENST00000598886 NOP58Q9Y2X3 529 aaKnown RBP19.33■□□□□ 0.68
SMG9-208ENST00000598886 FPGT-TNNI3KV9GXZ4 949 aa19.33■□□□□ 0.68
SMG9-208ENST00000598886 PLXNB2O15031 1838 aa19.32■□□□□ 0.68
SMG9-208ENST00000598886 DOCK3Q8IZD9 2030 aa19.32■□□□□ 0.68
SMG9-208ENST00000598886 FAM196BA6NMK8 535 aa19.32■□□□□ 0.68
SMG9-208ENST00000598886 ZBTB7BO15156 539 aaPredicted RBP19.32■□□□□ 0.68
SMG9-208ENST00000598886 UQCRFS1P1P0C7P4 283 aa19.32■□□□□ 0.68
SMG9-208ENST00000598886 OSBPP22059 807 aa19.32■□□□□ 0.68
SMG9-208ENST00000598886 PSMC4P43686 418 aa19.32■□□□□ 0.68
SMG9-208ENST00000598886 G3BP1Q13283 466 aaKnown RBP eCLIP19.32■□□□□ 0.68
SMG9-208ENST00000598886 CCDC84Q86UT8 332 aaPredicted RBP19.32■□□□□ 0.68
SMG9-208ENST00000598886 ZSCAN29Q8IWY8 852 aaPredicted RBP19.32■□□□□ 0.68
SMG9-208ENST00000598886 PARK7Q99497 189 aaKnown RBP19.32■□□□□ 0.68
SMG9-208ENST00000598886 OSBPL5Q9H0X9 879 aaPredicted RBP19.32■□□□□ 0.68
SMG9-208ENST00000598886 C1orf115Q9H7X2 142 aa19.32■□□□□ 0.68
SMG9-208ENST00000598886 SLC45A1Q9Y2W3 748 aa19.32■□□□□ 0.68
SMG9-208ENST00000598886 GSTO1P78417 241 aa19.31■□□□□ 0.68
SMG9-208ENST00000598886 KIF22Q14807 665 aa19.31■□□□□ 0.68
SMG9-208ENST00000598886 ADGRA1Q86SQ6 560 aa19.31■□□□□ 0.68
SMG9-208ENST00000598886 ZNF512BQ96KM6 892 aaPredicted RBP19.31■□□□□ 0.68
SMG9-208ENST00000598886 PICK1Q9NRD5 415 aa19.31■□□□□ 0.68
SMG9-208ENST00000598886 MYH1P12882 1939 aa19.31■□□□□ 0.68
SMG9-208ENST00000598886 CEP290O15078 2479 aa19.3■□□□□ 0.68
SMG9-208ENST00000598886 CYP2E1P05181 493 aaPredicted RBP19.3■□□□□ 0.68
SMG9-208ENST00000598886 LDHCP07864 332 aa19.3■□□□□ 0.68
SMG9-208ENST00000598886 HNRNPUQ00839 825 aaKnown RBP eCLIP19.3■□□□□ 0.68
SMG9-208ENST00000598886 GORABQ5T7V8 394 aa19.3■□□□□ 0.68
SMG9-208ENST00000598886 NBPF11Q86T75 865 aa19.3■□□□□ 0.68
SMG9-208ENST00000598886 SH3RF3Q8TEJ3 882 aaPredicted RBP19.3■□□□□ 0.68
SMG9-208ENST00000598886 SHISA4Q96DD7 197 aa19.3■□□□□ 0.68
SMG9-208ENST00000598886 FASTKD5Q7L8L6 764 aaKnown RBP19.29■□□□□ 0.68
SMG9-208ENST00000598886 SNRKQ9NRH2 765 aa19.29■□□□□ 0.68
SMG9-208ENST00000598886 TLR7Q9NYK1 1049 aaKnown RBP19.29■□□□□ 0.68
SMG9-208ENST00000598886 RAI14Q9P0K7 980 aa19.29■□□□□ 0.68
SMG9-208ENST00000598886 DBNLQ9UJU6 430 aaKnown RBP19.29■□□□□ 0.68
SMG9-208ENST00000598886 ECM2O94769 699 aaPredicted RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms