RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 PI16Q6UXB8 463 aa29.38■■■□□ 2.29
LSM7-205ENST00000589532 BTDP43251 543 aa29.37■■■□□ 2.29
LSM7-205ENST00000589532 RHBDL3P58872 404 aa29.37■■■□□ 2.29
LSM7-205ENST00000589532 PRPF38BQ5VTL8 546 aaKnown RBP29.37■■■□□ 2.29
LSM7-205ENST00000589532 ANKRD23Q86SG2 305 aa29.37■■■□□ 2.29
LSM7-205ENST00000589532 LACTBP83111 547 aaPredicted RBP29.36■■■□□ 2.29
LSM7-205ENST00000589532 MECOMQ03112 1051 aa29.36■■■□□ 2.29
LSM7-205ENST00000589532 SPTY2D1Q68D10 685 aaPredicted RBP29.36■■■□□ 2.29
LSM7-205ENST00000589532 ZNF333Q96JL9 665 aa29.36■■■□□ 2.29
LSM7-205ENST00000589532 ARHGAP39Q9C0H5 1083 aa29.36■■■□□ 2.29
LSM7-205ENST00000589532 PTCH2Q9Y6C5 1203 aa29.36■■■□□ 2.29
LSM7-205ENST00000589532 COL2A1P02458 1487 aaPredicted RBP29.36■■■□□ 2.29
LSM7-205ENST00000589532 GPR75-ASB3A0A0A6YYF3 556 aa29.35■■■□□ 2.29
LSM7-205ENST00000589532 DDTLA6NHG4 134 aaPredicted RBP29.35■■■□□ 2.29
LSM7-205ENST00000589532 POLA2Q14181 598 aa29.35■■■□□ 2.29
LSM7-205ENST00000589532 ZKSCAN2Q63HK3 967 aa29.35■■■□□ 2.29
LSM7-205ENST00000589532 C17orf99Q6UX52 265 aa29.35■■■□□ 2.29
LSM7-205ENST00000589532 SLF2Q8IX21 1173 aa29.34■■■□□ 2.29
LSM7-205ENST00000589532 SPATA5Q8NB90 893 aa29.34■■■□□ 2.29
LSM7-205ENST00000589532 SLURP2P0DP57 97 aa29.33■■■□□ 2.29
LSM7-205ENST00000589532 SCYL3Q8IZE3 742 aa29.33■■■□□ 2.29
LSM7-205ENST00000589532 NSUN4Q96CB9 384 aaKnown RBP29.33■■■□□ 2.29
LSM7-205ENST00000589532 YTHDC1Q96MU7 727 aaKnown RBP29.33■■■□□ 2.29
LSM7-205ENST00000589532 NEUROD6Q96NK8 337 aa29.33■■■□□ 2.29
LSM7-205ENST00000589532 NPM3O75607 178 aaKnown RBP29.32■■■□□ 2.28
LSM7-205ENST00000589532 CTGFP29279 349 aa29.32■■■□□ 2.28
LSM7-205ENST00000589532 MCAMP43121 646 aa29.32■■■□□ 2.28
LSM7-205ENST00000589532 ARHGEF6Q15052 776 aa29.32■■■□□ 2.28
LSM7-205ENST00000589532 ERICH6Q7L0X2 663 aa29.32■■■□□ 2.28
LSM7-205ENST00000589532 SIPA1L1O43166 1804 aa29.31■■■□□ 2.28
LSM7-205ENST00000589532 PDHXO00330 501 aa29.31■■■□□ 2.28
LSM7-205ENST00000589532 GPAT2Q6NUI2 795 aa29.31■■■□□ 2.28
LSM7-205ENST00000589532 SSH3Q8TE77 659 aa29.31■■■□□ 2.28
LSM7-205ENST00000589532 CXCL11O14625 94 aa29.3■■■□□ 2.28
LSM7-205ENST00000589532 TBC1D9Q6ZT07 1266 aa29.3■■■□□ 2.28
LSM7-205ENST00000589532 GPR108Q9NPR9 543 aa29.3■■■□□ 2.28
LSM7-205ENST00000589532 A0A0G2JLL6 359 aaPredicted RBP29.29■■■□□ 2.28
LSM7-205ENST00000589532 PTPRAP18433 802 aa29.29■■■□□ 2.28
LSM7-205ENST00000589532 G3BP1Q13283 466 aaKnown RBP eCLIP29.29■■■□□ 2.28
LSM7-205ENST00000589532 PICALMQ13492 652 aa29.29■■■□□ 2.28
LSM7-205ENST00000589532 PRRT2Q7Z6L0 340 aaPredicted RBP29.29■■■□□ 2.28
LSM7-205ENST00000589532 CDK5RAP2Q96SN8 1893 aa29.28■■■□□ 2.28
LSM7-205ENST00000589532 SLC9C1Q4G0N8 1177 aa29.28■■■□□ 2.28
LSM7-205ENST00000589532 CPA4Q9UI42 421 aa29.28■■■□□ 2.28
LSM7-205ENST00000589532 FOCADQ5VW36 1801 aa29.28■■■□□ 2.28
LSM7-205ENST00000589532 ATAD5Q96QE3 1844 aa29.28■■■□□ 2.28
LSM7-205ENST00000589532 LOC285556D6RIA3 1793 aa29.27■■■□□ 2.28
LSM7-205ENST00000589532 GNRH1P01148 92 aa29.27■■■□□ 2.28
LSM7-205ENST00000589532 RLBP1P12271 317 aa29.27■■■□□ 2.28
LSM7-205ENST00000589532 AFG3L2Q9Y4W6 797 aa29.27■■■□□ 2.28
LSM7-205ENST00000589532 MYO5AQ9Y4I1 1855 aaKnown RBP29.27■■■□□ 2.28
LSM7-205ENST00000589532 MGAMO43451 1857 aa29.26■■■□□ 2.27
LSM7-205ENST00000589532 MAP4K4O95819 1239 aaPredicted RBP29.26■■■□□ 2.27
LSM7-205ENST00000589532 BCRP11274 1271 aa29.26■■■□□ 2.27
LSM7-205ENST00000589532 TNNI3KQ59H18 835 aa29.26■■■□□ 2.27
LSM7-205ENST00000589532 GORABQ5T7V8 394 aa29.26■■■□□ 2.27
LSM7-205ENST00000589532 ZSCAN29Q8IWY8 852 aaPredicted RBP29.26■■■□□ 2.27
LSM7-205ENST00000589532 TRIM47Q96LD4 638 aa29.26■■■□□ 2.27
LSM7-205ENST00000589532 ZHX2Q9Y6X8 837 aa29.26■■■□□ 2.27
LSM7-205ENST00000589532 FPGT-TNNI3KV9GXZ4 949 aa29.26■■■□□ 2.27
LSM7-205ENST00000589532 TBC1D12O60347 775 aa29.25■■■□□ 2.27
LSM7-205ENST00000589532 UQCRFS1P1P0C7P4 283 aa29.25■■■□□ 2.27
LSM7-205ENST00000589532 GSTO1P78417 241 aa29.25■■■□□ 2.27
LSM7-205ENST00000589532 ATP8B2P98198 1209 aa29.25■■■□□ 2.27
LSM7-205ENST00000589532 KIF22Q14807 665 aa29.25■■■□□ 2.27
LSM7-205ENST00000589532 PARK7Q99497 189 aaKnown RBP29.25■■■□□ 2.27
LSM7-205ENST00000589532 C1orf115Q9H7X2 142 aa29.25■■■□□ 2.27
LSM7-205ENST00000589532 CTNND1O60716 968 aaKnown RBP29.24■■■□□ 2.27
LSM7-205ENST00000589532 EN2P19622 333 aaPredicted RBP29.24■■■□□ 2.27
LSM7-205ENST00000589532 PRMT2P55345 433 aa29.24■■■□□ 2.27
LSM7-205ENST00000589532 DBNDD2Q9BQY9 259 aa29.24■■■□□ 2.27
LSM7-205ENST00000589532 OSBPL5Q9H0X9 879 aaPredicted RBP29.24■■■□□ 2.27
LSM7-205ENST00000589532 PICK1Q9NRD5 415 aa29.24■■■□□ 2.27
LSM7-205ENST00000589532 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.24■■■□□ 2.27
LSM7-205ENST00000589532 RAI14Q9P0K7 980 aa29.23■■■□□ 2.27
LSM7-205ENST00000589532 NOP58Q9Y2X3 529 aaKnown RBP29.23■■■□□ 2.27
LSM7-205ENST00000589532 ZBTB7BO15156 539 aaPredicted RBP29.22■■■□□ 2.27
LSM7-205ENST00000589532 LDHCP07864 332 aa29.22■■■□□ 2.27
LSM7-205ENST00000589532 CYP2C8P10632 490 aa29.22■■■□□ 2.27
LSM7-205ENST00000589532 SH3TC2Q8TF17 1288 aa29.22■■■□□ 2.27
LSM7-205ENST00000589532 SRRDQ9UH36 339 aa29.22■■■□□ 2.27
LSM7-205ENST00000589532 FAM196BA6NMK8 535 aa29.21■■■□□ 2.27
LSM7-205ENST00000589532 NBPF11Q86T75 865 aa29.21■■■□□ 2.27
LSM7-205ENST00000589532 CCDC84Q86UT8 332 aaPredicted RBP29.21■■■□□ 2.27
LSM7-205ENST00000589532 ZNF512BQ96KM6 892 aaPredicted RBP29.21■■■□□ 2.27
LSM7-205ENST00000589532 SLC45A1Q9Y2W3 748 aa29.21■■■□□ 2.27
LSM7-205ENST00000589532 OSBPP22059 807 aa29.2■■■□□ 2.26
LSM7-205ENST00000589532 PSMC4P43686 418 aa29.2■■■□□ 2.26
LSM7-205ENST00000589532 FASTKD5Q7L8L6 764 aaKnown RBP29.2■■■□□ 2.26
LSM7-205ENST00000589532 FTSJ3Q8IY81 847 aaKnown RBP29.2■■■□□ 2.26
LSM7-205ENST00000589532 CYP2E1P05181 493 aaPredicted RBP29.19■■■□□ 2.26
LSM7-205ENST00000589532 ADGRA1Q86SQ6 560 aa29.19■■■□□ 2.26
LSM7-205ENST00000589532 SNRKQ9NRH2 765 aa29.19■■■□□ 2.26
LSM7-205ENST00000589532 DBNLQ9UJU6 430 aaKnown RBP29.19■■■□□ 2.26
LSM7-205ENST00000589532 SURF6O75683 361 aaKnown RBP29.18■■■□□ 2.26
LSM7-205ENST00000589532 RRP1BQ14684 758 aaKnown RBP29.18■■■□□ 2.26
LSM7-205ENST00000589532 TTC39AQ5SRH9 613 aa29.18■■■□□ 2.26
LSM7-205ENST00000589532 ITPRIPQ8IWB1 547 aa29.18■■■□□ 2.26
LSM7-205ENST00000589532 SH3RF3Q8TEJ3 882 aaPredicted RBP29.18■■■□□ 2.26
LSM7-205ENST00000589532 TMEM106CQ9BVX2 250 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms