RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 NUDT8Q8WV74 236 aa6.47□□□□□ -1.37
CDH8-206ENST00000580044 PANK2Q9BZ23 570 aa6.47□□□□□ -1.37
CDH8-206ENST00000580044 STARD13Q9Y3M8 1113 aa6.47□□□□□ -1.37
CDH8-206ENST00000580044 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.47□□□□□ -1.37
CDH8-206ENST00000580044 ATP10DQ9P241 1426 aa6.47□□□□□ -1.37
CDH8-206ENST00000580044 USP54Q70EL1 1684 aa6.46□□□□□ -1.37
CDH8-206ENST00000580044 EPB41L2O43491 1005 aaKnown RBP6.46□□□□□ -1.38
CDH8-206ENST00000580044 BAG4O95429 457 aaKnown RBP6.46□□□□□ -1.38
CDH8-206ENST00000580044 MBD3O95983 291 aa6.46□□□□□ -1.38
CDH8-206ENST00000580044 H2AFB1P0C5Y9 115 aa6.46□□□□□ -1.38
CDH8-206ENST00000580044 H2AFB2P0C5Z0 115 aa6.46□□□□□ -1.38
CDH8-206ENST00000580044 NID1P14543 1247 aa6.46□□□□□ -1.38
CDH8-206ENST00000580044 MSNP26038 577 aaKnown RBP6.46□□□□□ -1.38
CDH8-206ENST00000580044 MCM5P33992 734 aa6.46□□□□□ -1.38
CDH8-206ENST00000580044 NKAPLQ5M9Q1 402 aa6.46□□□□□ -1.38
CDH8-206ENST00000580044 C8orf86Q6ZUL3 223 aa6.46□□□□□ -1.38
CDH8-206ENST00000580044 TXNRD3Q86VQ6 643 aa6.46□□□□□ -1.38
CDH8-206ENST00000580044 ZSCAN30Q86W11 494 aa6.46□□□□□ -1.38
CDH8-206ENST00000580044 LENG1Q96BZ8 264 aaPredicted RBP6.46□□□□□ -1.38
CDH8-206ENST00000580044 POM121Q96HA1 1249 aa6.46□□□□□ -1.38
CDH8-206ENST00000580044 COG3Q96JB2 828 aa6.46□□□□□ -1.38
CDH8-206ENST00000580044 MDFIQ99750 246 aa6.46□□□□□ -1.38
CDH8-206ENST00000580044 SLC6A14Q9UN76 642 aa6.46□□□□□ -1.38
CDH8-206ENST00000580044 DDX49Q9Y6V7 483 aaKnown RBP6.46□□□□□ -1.38
CDH8-206ENST00000580044 PXDNLA1KZ92 1463 aa6.46□□□□□ -1.38
CDH8-206ENST00000580044 SOS1Q07889 1333 aaPredicted RBP6.46□□□□□ -1.38
CDH8-206ENST00000580044 TTC21BQ7Z4L5 1316 aa6.46□□□□□ -1.38
CDH8-206ENST00000580044 RTL1A6NKG5 1358 aa6.45□□□□□ -1.38
CDH8-206ENST00000580044 XRN1Q8IZH2 1706 aaKnown RBP6.45□□□□□ -1.38
CDH8-206ENST00000580044 RGS12O14924 1447 aa6.45□□□□□ -1.38
CDH8-206ENST00000580044 A0A0A0MRY4 1105 aa6.45□□□□□ -1.38
CDH8-206ENST00000580044 CYP2E1P05181 493 aaPredicted RBP6.45□□□□□ -1.38
CDH8-206ENST00000580044 MCCP23508 829 aa6.45□□□□□ -1.38
CDH8-206ENST00000580044 HSP90AA2PQ14568 343 aaPredicted RBP6.45□□□□□ -1.38
CDH8-206ENST00000580044 RTN1Q16799 776 aa6.45□□□□□ -1.38
CDH8-206ENST00000580044 PRSS36Q5K4E3 855 aa6.45□□□□□ -1.38
CDH8-206ENST00000580044 IER5Q5VY09 327 aa6.45□□□□□ -1.38
CDH8-206ENST00000580044 PSAPL1Q6NUJ1 521 aa6.45□□□□□ -1.38
CDH8-206ENST00000580044 SIRT2Q8IXJ6 389 aa6.45□□□□□ -1.38
CDH8-206ENST00000580044 ZNF280CQ8ND82 737 aa6.45□□□□□ -1.38
CDH8-206ENST00000580044 C7orf43Q8WVR3 580 aa6.45□□□□□ -1.38
CDH8-206ENST00000580044 ARXQ96QS3 562 aa6.45□□□□□ -1.38
CDH8-206ENST00000580044 KIAA1024Q9UPX6 916 aa6.45□□□□□ -1.38
CDH8-206ENST00000580044 DIP2BQ9P265 1576 aa6.44□□□□□ -1.38
CDH8-206ENST00000580044 ERC2O15083 957 aa6.44□□□□□ -1.38
CDH8-206ENST00000580044 RAPGEF3O95398 923 aa6.44□□□□□ -1.38
CDH8-206ENST00000580044 GSPT1P15170 499 aaKnown RBP6.44□□□□□ -1.38
CDH8-206ENST00000580044 SSFA2P28290 1259 aa6.44□□□□□ -1.38
CDH8-206ENST00000580044 CCT4P50991 539 aaKnown RBP6.44□□□□□ -1.38
CDH8-206ENST00000580044 C20orf204Q6ZNR8 217 aa6.44□□□□□ -1.38
CDH8-206ENST00000580044 FAM35AQ86V20 835 aa6.44□□□□□ -1.38
CDH8-206ENST00000580044 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.44□□□□□ -1.38
CDH8-206ENST00000580044 SYAP1Q96A49 352 aaPredicted RBP6.44□□□□□ -1.38
CDH8-206ENST00000580044 TP53INP1Q96A56 240 aa6.44□□□□□ -1.38
CDH8-206ENST00000580044 PHACTR3Q96KR7 559 aa6.44□□□□□ -1.38
CDH8-206ENST00000580044 MAP7D2Q96T17 732 aa6.44□□□□□ -1.38
CDH8-206ENST00000580044 C2orf49Q9BVC5 232 aaPredicted RBP6.44□□□□□ -1.38
CDH8-206ENST00000580044 USP26Q9BXU7 913 aa6.44□□□□□ -1.38
CDH8-206ENST00000580044 DNAJB12Q9NXW2 375 aaKnown RBP6.44□□□□□ -1.38
CDH8-206ENST00000580044 UBR1Q8IWV7 1749 aa6.44□□□□□ -1.38
CDH8-206ENST00000580044 OVOS2A0A0J9YW53 1432 aa6.43□□□□□ -1.38
CDH8-206ENST00000580044 OVOS2Q6IE36 1432 aa6.43□□□□□ -1.38
CDH8-206ENST00000580044 PEAK1Q9H792 1746 aa6.43□□□□□ -1.38
CDH8-206ENST00000580044 POM121CA8CG34 1229 aa6.43□□□□□ -1.38
CDH8-206ENST00000580044 TGFBR3LH3BV60 316 aa6.43□□□□□ -1.38
CDH8-206ENST00000580044 HMOX1P09601 288 aa6.43□□□□□ -1.38
CDH8-206ENST00000580044 NFKB1P19838 968 aa6.43□□□□□ -1.38
CDH8-206ENST00000580044 ANAPC15P60006 121 aa6.43□□□□□ -1.38
CDH8-206ENST00000580044 ADGRE1Q14246 886 aa6.43□□□□□ -1.38
CDH8-206ENST00000580044 ARTNQ5T4W7 220 aa6.43□□□□□ -1.38
CDH8-206ENST00000580044 CEP85Q6P2H3 762 aa6.43□□□□□ -1.38
CDH8-206ENST00000580044 ELMSAN1Q6PJG2 1045 aa6.43□□□□□ -1.38
CDH8-206ENST00000580044 MTERF4Q7Z6M4 381 aaKnown RBP6.43□□□□□ -1.38
CDH8-206ENST00000580044 GAS2L3Q86XJ1 694 aa6.43□□□□□ -1.38
CDH8-206ENST00000580044 DMRTC2Q8IXT2 367 aaPredicted RBP6.43□□□□□ -1.38
CDH8-206ENST00000580044 DTWD1Q8N5C7 304 aa6.43□□□□□ -1.38
CDH8-206ENST00000580044 TSPYL6Q8N831 410 aa6.43□□□□□ -1.38
CDH8-206ENST00000580044 PSMG3-AS1Q96PY0 264 aa6.43□□□□□ -1.38
CDH8-206ENST00000580044 RBSNQ9H1K0 784 aa6.43□□□□□ -1.38
CDH8-206ENST00000580044 C1orf115Q9H7X2 142 aa6.43□□□□□ -1.38
CDH8-206ENST00000580044 AOX1Q06278 1338 aa6.43□□□□□ -1.38
CDH8-206ENST00000580044 MSH6P52701 1360 aa6.43□□□□□ -1.38
CDH8-206ENST00000580044 CHD2O14647 1828 aaKnown RBP6.42□□□□□ -1.38
CDH8-206ENST00000580044 CHL1O00533 1208 aa6.42□□□□□ -1.38
CDH8-206ENST00000580044 ZNF500O60304 480 aaPredicted RBP6.42□□□□□ -1.38
CDH8-206ENST00000580044 OFD1O75665 1012 aa6.42□□□□□ -1.38
CDH8-206ENST00000580044 MBTPS1Q14703 1052 aa6.42□□□□□ -1.38
CDH8-206ENST00000580044 ZSCAN23Q3MJ62 389 aa6.42□□□□□ -1.38
CDH8-206ENST00000580044 POTEAQ6S8J7 498 aa6.42□□□□□ -1.38
CDH8-206ENST00000580044 WFDC8Q8IUA0 241 aa6.42□□□□□ -1.38
CDH8-206ENST00000580044 C8orf58Q8NAV2 365 aa6.42□□□□□ -1.38
CDH8-206ENST00000580044 IL17RAQ96F46 866 aa6.42□□□□□ -1.38
CDH8-206ENST00000580044 INTS4Q96HW7 963 aaKnown RBP6.42□□□□□ -1.38
CDH8-206ENST00000580044 GSX2Q9BZM3 304 aa6.42□□□□□ -1.38
CDH8-206ENST00000580044 SRCIN1Q9C0H9 1055 aa6.42□□□□□ -1.38
CDH8-206ENST00000580044 PDCL3Q9H2J4 239 aa6.42□□□□□ -1.38
CDH8-206ENST00000580044 C11orf16Q9NQ32 467 aa6.42□□□□□ -1.38
CDH8-206ENST00000580044 LMBRD1Q9NUN5 540 aa6.42□□□□□ -1.38
CDH8-206ENST00000580044 TFIP11Q9UBB9 837 aaKnown RBP6.42□□□□□ -1.38
CDH8-206ENST00000580044 CCDC39Q9UFE4 941 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms