RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 TSHZ3Q63HK5 1081 aa10.62□□□□□ -0.71
SMG6-216ENST00000575176 SPTY2D1Q68D10 685 aaPredicted RBP10.62□□□□□ -0.71
SMG6-216ENST00000575176 CLASRPQ8N2M8 674 aaKnown RBP10.62□□□□□ -0.71
SMG6-216ENST00000575176 EXOC6Q8TAG9 804 aa10.62□□□□□ -0.71
SMG6-216ENST00000575176 PI4K2BQ8TCG2 481 aa10.62□□□□□ -0.71
SMG6-216ENST00000575176 SH3RF3Q8TEJ3 882 aaPredicted RBP10.62□□□□□ -0.71
SMG6-216ENST00000575176 CCDC102AQ96A19 550 aa10.62□□□□□ -0.71
SMG6-216ENST00000575176 MS4A4AQ96JQ5 239 aa10.62□□□□□ -0.71
SMG6-216ENST00000575176 LRRCC1Q9C099 1032 aa10.62□□□□□ -0.71
SMG6-216ENST00000575176 USP40Q9NVE5 1235 aa10.62□□□□□ -0.71
SMG6-216ENST00000575176 IGF2BP3O00425 579 aaKnown RBP eCLIP10.61□□□□□ -0.71
SMG6-216ENST00000575176 INPP5BP32019 993 aa10.61□□□□□ -0.71
SMG6-216ENST00000575176 NF2P35240 595 aa10.61□□□□□ -0.71
SMG6-216ENST00000575176 DYNLL1P63167 89 aaKnown RBP10.61□□□□□ -0.71
SMG6-216ENST00000575176 MAP2K1Q02750 393 aaPredicted RBP10.61□□□□□ -0.71
SMG6-216ENST00000575176 EVX2Q03828 476 aa10.61□□□□□ -0.71
SMG6-216ENST00000575176 MOGSQ13724 837 aa10.61□□□□□ -0.71
SMG6-216ENST00000575176 SUPT20HL1Q3ZLR7 823 aa10.61□□□□□ -0.71
SMG6-216ENST00000575176 PAXIP1Q6ZW49 1069 aaPredicted RBP10.61□□□□□ -0.71
SMG6-216ENST00000575176 ARMC9Q7Z3E5 817 aa10.61□□□□□ -0.71
SMG6-216ENST00000575176 METTL16Q86W50 562 aaKnown RBP10.61□□□□□ -0.71
SMG6-216ENST00000575176 HAUS7Q99871 368 aa10.61□□□□□ -0.71
SMG6-216ENST00000575176 CFHR5Q9BXR6 569 aa10.61□□□□□ -0.71
SMG6-216ENST00000575176 OSBPL5Q9H0X9 879 aaPredicted RBP10.61□□□□□ -0.71
SMG6-216ENST00000575176 TSKSQ9UJT2 592 aa10.61□□□□□ -0.71
SMG6-216ENST00000575176 RBBP6Q7Z6E9 1792 aaKnown RBP10.61□□□□□ -0.71
SMG6-216ENST00000575176 TESPA1A2RU30 521 aaPredicted RBP10.6□□□□□ -0.71
SMG6-216ENST00000575176 SPDYE5A6NIY4 337 aa10.6□□□□□ -0.71
SMG6-216ENST00000575176 ZBTB48P10074 688 aaPredicted RBP10.6□□□□□ -0.71
SMG6-216ENST00000575176 PDE6AP16499 860 aa10.6□□□□□ -0.71
SMG6-216ENST00000575176 TM4SF4P48230 202 aa10.6□□□□□ -0.71
SMG6-216ENST00000575176 TNNI2P48788 182 aa10.6□□□□□ -0.71
SMG6-216ENST00000575176 CAP1Q01518 475 aa10.6□□□□□ -0.71
SMG6-216ENST00000575176 NOL9Q5SY16 702 aaKnown RBP10.6□□□□□ -0.71
SMG6-216ENST00000575176 NAA16Q6N069 864 aaPredicted RBP10.6□□□□□ -0.71
SMG6-216ENST00000575176 SMC5Q8IY18 1101 aa10.6□□□□□ -0.71
SMG6-216ENST00000575176 ANKRD13AQ8IZ07 590 aa10.6□□□□□ -0.71
SMG6-216ENST00000575176 ZKSCAN4Q969J2 545 aaPredicted RBP10.6□□□□□ -0.71
SMG6-216ENST00000575176 PTPN18Q99952 460 aa10.6□□□□□ -0.71
SMG6-216ENST00000575176 R3HDMLQ9H3Y0 253 aa10.6□□□□□ -0.71
SMG6-216ENST00000575176 SAGE1Q9NXZ1 904 aa10.6□□□□□ -0.71
SMG6-216ENST00000575176 AATFQ9NY61 560 aaKnown RBP eCLIP10.6□□□□□ -0.71
SMG6-216ENST00000575176 RAI14Q9P0K7 980 aa10.6□□□□□ -0.71
SMG6-216ENST00000575176 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.6□□□□□ -0.71
SMG6-216ENST00000575176 PLXNB2O15031 1838 aa10.59□□□□□ -0.71
SMG6-216ENST00000575176 GOLIM4O00461 696 aa10.59□□□□□ -0.71
SMG6-216ENST00000575176 PPP1R12BO60237 982 aaPredicted RBP10.59□□□□□ -0.71
SMG6-216ENST00000575176 MAP4K4O95819 1239 aaPredicted RBP10.59□□□□□ -0.71
SMG6-216ENST00000575176 IGHDP01880 384 aa10.59□□□□□ -0.71
SMG6-216ENST00000575176 IREB2P48200 963 aaKnown RBP10.59□□□□□ -0.71
SMG6-216ENST00000575176 LBX1P52954 281 aa10.59□□□□□ -0.71
SMG6-216ENST00000575176 GSTO1P78417 241 aa10.59□□□□□ -0.71
SMG6-216ENST00000575176 JAG1P78504 1218 aa10.59□□□□□ -0.71
SMG6-216ENST00000575176 MKRN3Q13064 507 aaKnown RBP10.59□□□□□ -0.71
SMG6-216ENST00000575176 SHROOM1Q2M3G4 852 aaPredicted RBP10.59□□□□□ -0.71
SMG6-216ENST00000575176 MIGA2Q7L4E1 593 aa10.59□□□□□ -0.71
SMG6-216ENST00000575176 MAGEB6Q8N7X4 407 aa10.59□□□□□ -0.71
SMG6-216ENST00000575176 OPTNQ96CV9 577 aa10.59□□□□□ -0.71
SMG6-216ENST00000575176 WRNIP1Q96S55 665 aa10.59□□□□□ -0.71
SMG6-216ENST00000575176 ELP3Q9H9T3 547 aa10.59□□□□□ -0.71
SMG6-216ENST00000575176 PRDM10Q9NQV6 1147 aa10.59□□□□□ -0.71
SMG6-216ENST00000575176 RNF186Q9NXI6 227 aa10.59□□□□□ -0.71
SMG6-216ENST00000575176 TMOD2Q9NZR1 351 aa10.59□□□□□ -0.71
SMG6-216ENST00000575176 LRP2BPQ9P2M1 347 aa10.59□□□□□ -0.71
SMG6-216ENST00000575176 SUPT16HQ9Y5B9 1047 aaKnown RBP10.59□□□□□ -0.71
SMG6-216ENST00000575176 ADGRA2Q96PE1 1338 aa10.58□□□□□ -0.71
SMG6-216ENST00000575176 MKI67P46013 3256 aaKnown RBP10.58□□□□□ -0.72
SMG6-216ENST00000575176 FAM196BA6NMK8 535 aa10.58□□□□□ -0.72
SMG6-216ENST00000575176 IDH1O75874 414 aaKnown RBP10.58□□□□□ -0.72
SMG6-216ENST00000575176 IFIT2P09913 472 aaKnown RBP10.58□□□□□ -0.72
SMG6-216ENST00000575176 ADD2P35612 726 aa10.58□□□□□ -0.72
SMG6-216ENST00000575176 CTCFP49711 727 aaPredicted RBP10.58□□□□□ -0.72
SMG6-216ENST00000575176 PICALMQ13492 652 aa10.58□□□□□ -0.72
SMG6-216ENST00000575176 TTLL12Q14166 644 aaPredicted RBP10.58□□□□□ -0.72
SMG6-216ENST00000575176 SLF2Q8IX21 1173 aa10.58□□□□□ -0.72
SMG6-216ENST00000575176 MIGA1Q8NAN2 632 aa10.58□□□□□ -0.72
SMG6-216ENST00000575176 BRI3BPQ8WY22 251 aa10.58□□□□□ -0.72
SMG6-216ENST00000575176 BOLA2Q9H3K6 86 aa10.58□□□□□ -0.72
SMG6-216ENST00000575176 PAG1Q9NWQ8 432 aa10.58□□□□□ -0.72
SMG6-216ENST00000575176 ZNF532Q9HCE3 1301 aa10.58□□□□□ -0.72
SMG6-216ENST00000575176 SMIM22K7EJ46 135 aa10.57□□□□□ -0.72
SMG6-216ENST00000575176 TBC1D12O60347 775 aa10.57□□□□□ -0.72
SMG6-216ENST00000575176 LDHCP07864 332 aa10.57□□□□□ -0.72
SMG6-216ENST00000575176 CYP7A1P22680 504 aa10.57□□□□□ -0.72
SMG6-216ENST00000575176 MAP3K9P80192 1104 aa10.57□□□□□ -0.72
SMG6-216ENST00000575176 TMED8Q6PL24 325 aaPredicted RBP10.57□□□□□ -0.72
SMG6-216ENST00000575176 TEX11Q8IYF3 940 aa10.57□□□□□ -0.72
SMG6-216ENST00000575176 LCORLQ8N3X6 602 aa10.57□□□□□ -0.72
SMG6-216ENST00000575176 DNAJC2Q99543 621 aaKnown RBP10.57□□□□□ -0.72
SMG6-216ENST00000575176 ZNF341Q9BYN7 854 aa10.57□□□□□ -0.72
SMG6-216ENST00000575176 ECHDC1Q9NTX5 307 aa10.57□□□□□ -0.72
SMG6-216ENST00000575176 KCNH4Q9UQ05 1017 aa10.57□□□□□ -0.72
SMG6-216ENST00000575176 TTC41PQ6P2S7 1318 aa10.57□□□□□ -0.72
SMG6-216ENST00000575176 IRF6O14896 467 aa10.56□□□□□ -0.72
SMG6-216ENST00000575176 FOXP2O15409 715 aa10.56□□□□□ -0.72
SMG6-216ENST00000575176 CA12O43570 354 aa10.56□□□□□ -0.72
SMG6-216ENST00000575176 PPIL2Q13356 520 aa10.56□□□□□ -0.72
SMG6-216ENST00000575176 AAMPQ13685 434 aa10.56□□□□□ -0.72
SMG6-216ENST00000575176 NOM1Q5C9Z4 860 aaKnown RBP10.56□□□□□ -0.72
SMG6-216ENST00000575176 IFNL1Q8IU54 200 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms