RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 MVPQ14764 893 aaKnown RBP18.29■□□□□ 0.52
NDE1-203ENST00000570727 KIF22Q14807 665 aa18.29■□□□□ 0.52
NDE1-203ENST00000570727 SLC9C1Q4G0N8 1177 aa18.29■□□□□ 0.52
NDE1-203ENST00000570727 SPTY2D1Q68D10 685 aaPredicted RBP18.29■□□□□ 0.52
NDE1-203ENST00000570727 GPAT2Q6NUI2 795 aa18.29■□□□□ 0.52
NDE1-203ENST00000570727 NBPF11Q86T75 865 aa18.29■□□□□ 0.52
NDE1-203ENST00000570727 NEUROD6Q96NK8 337 aa18.29■□□□□ 0.52
NDE1-203ENST00000570727 HMG20BQ9P0W2 317 aa18.29■□□□□ 0.52
NDE1-203ENST00000570727 ADGRA2Q96PE1 1338 aa18.28■□□□□ 0.52
NDE1-203ENST00000570727 GPR75-ASB3A0A0A6YYF3 556 aa18.28■□□□□ 0.52
NDE1-203ENST00000570727 BTDP43251 543 aa18.28■□□□□ 0.52
NDE1-203ENST00000570727 RHBDL3P58872 404 aa18.28■□□□□ 0.52
NDE1-203ENST00000570727 SLF2Q8IX21 1173 aa18.28■□□□□ 0.52
NDE1-203ENST00000570727 FRAT1Q92837 279 aaPredicted RBP18.28■□□□□ 0.52
NDE1-203ENST00000570727 CLUAP1Q96AJ1 413 aa18.28■□□□□ 0.52
NDE1-203ENST00000570727 MROH7-TTC4A0A0A0MT08 1334 aa18.27■□□□□ 0.52
NDE1-203ENST00000570727 GNRH1P01148 92 aa18.27■□□□□ 0.52
NDE1-203ENST00000570727 PTPRAP18433 802 aa18.27■□□□□ 0.52
NDE1-203ENST00000570727 PI16Q6UXB8 463 aa18.27■□□□□ 0.52
NDE1-203ENST00000570727 TBC1D9Q6ZT07 1266 aa18.27■□□□□ 0.52
NDE1-203ENST00000570727 ERICH6Q7L0X2 663 aa18.27■□□□□ 0.52
NDE1-203ENST00000570727 ZSCAN29Q8IWY8 852 aaPredicted RBP18.27■□□□□ 0.52
NDE1-203ENST00000570727 SCYL3Q8IZE3 742 aa18.27■□□□□ 0.52
NDE1-203ENST00000570727 SH3TC2Q8TF17 1288 aa18.27■□□□□ 0.52
NDE1-203ENST00000570727 TMEM106CQ9BVX2 250 aa18.27■□□□□ 0.52
NDE1-203ENST00000570727 ECM2O94769 699 aaPredicted RBP18.26■□□□□ 0.51
NDE1-203ENST00000570727 PSMC4P43686 418 aa18.26■□□□□ 0.51
NDE1-203ENST00000570727 SPATA5Q8NB90 893 aa18.26■□□□□ 0.51
NDE1-203ENST00000570727 TRIM47Q96LD4 638 aa18.26■□□□□ 0.51
NDE1-203ENST00000570727 AFG3L2Q9Y4W6 797 aa18.26■□□□□ 0.51
NDE1-203ENST00000570727 ZHX2Q9Y6X8 837 aa18.26■□□□□ 0.51
NDE1-203ENST00000570727 PHIPQ8WWQ0 1821 aa18.26■□□□□ 0.51
NDE1-203ENST00000570727 ARID4AP29374 1257 aaPredicted RBP18.25■□□□□ 0.51
NDE1-203ENST00000570727 PRMT2P55345 433 aa18.25■□□□□ 0.51
NDE1-203ENST00000570727 G3BP1Q13283 466 aaKnown RBP eCLIP18.25■□□□□ 0.51
NDE1-203ENST00000570727 PICALMQ13492 652 aa18.25■□□□□ 0.51
NDE1-203ENST00000570727 TMEM57Q8N5G2 664 aa18.25■□□□□ 0.51
NDE1-203ENST00000570727 NSUN4Q96CB9 384 aaKnown RBP18.25■□□□□ 0.51
NDE1-203ENST00000570727 PTPRFP10586 1907 aa18.24■□□□□ 0.51
NDE1-203ENST00000570727 A0A0G2JLL6 359 aaPredicted RBP18.24■□□□□ 0.51
NDE1-203ENST00000570727 CTNND1O60716 968 aaKnown RBP18.24■□□□□ 0.51
NDE1-203ENST00000570727 NPM3O75607 178 aaKnown RBP18.24■□□□□ 0.51
NDE1-203ENST00000570727 MYCP01106 439 aaPredicted RBP18.24■□□□□ 0.51
NDE1-203ENST00000570727 CYP2C8P10632 490 aa18.24■□□□□ 0.51
NDE1-203ENST00000570727 BCRP11274 1271 aa18.24■□□□□ 0.51
NDE1-203ENST00000570727 SLC4A8Q2Y0W8 1093 aa18.24■□□□□ 0.51
NDE1-203ENST00000570727 GORABQ5T7V8 394 aa18.24■□□□□ 0.51
NDE1-203ENST00000570727 PRRT2Q7Z6L0 340 aaPredicted RBP18.24■□□□□ 0.51
NDE1-203ENST00000570727 PICK1Q9NRD5 415 aa18.24■□□□□ 0.51
NDE1-203ENST00000570727 SRRDQ9UH36 339 aa18.24■□□□□ 0.51
NDE1-203ENST00000570727 TBC1D12O60347 775 aa18.23■□□□□ 0.51
NDE1-203ENST00000570727 OSBPP22059 807 aa18.23■□□□□ 0.51
NDE1-203ENST00000570727 MCAMP43121 646 aa18.23■□□□□ 0.51
NDE1-203ENST00000570727 POLA2Q14181 598 aa18.23■□□□□ 0.51
NDE1-203ENST00000570727 MGAMO43451 1857 aa18.22■□□□□ 0.51
NDE1-203ENST00000570727 DOCK1Q14185 1865 aa18.22■□□□□ 0.51
NDE1-203ENST00000570727 FMNL1O95466 1100 aaPredicted RBP18.22■□□□□ 0.51
NDE1-203ENST00000570727 LDHCP07864 332 aa18.22■□□□□ 0.51
NDE1-203ENST00000570727 ZKSCAN2Q63HK3 967 aa18.22■□□□□ 0.51
NDE1-203ENST00000570727 FASTKD5Q7L8L6 764 aaKnown RBP18.22■□□□□ 0.51
NDE1-203ENST00000570727 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.22■□□□□ 0.51
NDE1-203ENST00000570727 FAM196BA6NMK8 535 aa18.21■□□□□ 0.51
NDE1-203ENST00000570727 MAP4K4O95819 1239 aaPredicted RBP18.21■□□□□ 0.51
NDE1-203ENST00000570727 HOXD10P28358 340 aa18.21■□□□□ 0.51
NDE1-203ENST00000570727 GSTO1P78417 241 aa18.21■□□□□ 0.51
NDE1-203ENST00000570727 ATP8B2P98198 1209 aa18.21■□□□□ 0.51
NDE1-203ENST00000570727 CCDC84Q86UT8 332 aaPredicted RBP18.21■□□□□ 0.51
NDE1-203ENST00000570727 SSH3Q8TE77 659 aa18.21■□□□□ 0.51
NDE1-203ENST00000570727 PARK7Q99497 189 aaKnown RBP18.21■□□□□ 0.51
NDE1-203ENST00000570727 GPR108Q9NPR9 543 aa18.21■□□□□ 0.51
NDE1-203ENST00000570727 RAI14Q9P0K7 980 aa18.21■□□□□ 0.51
NDE1-203ENST00000570727 UQCRFS1P1P0C7P4 283 aa18.2■□□□□ 0.5
NDE1-203ENST00000570727 MTFR1Q15390 333 aa18.2■□□□□ 0.5
NDE1-203ENST00000570727 GADL1Q6ZQY3 521 aa18.2■□□□□ 0.5
NDE1-203ENST00000570727 SLC45A1Q9Y2W3 748 aa18.2■□□□□ 0.5
NDE1-203ENST00000570727 GRK4P32298 578 aa18.19■□□□□ 0.5
NDE1-203ENST00000570727 RRP1BQ14684 758 aaKnown RBP18.19■□□□□ 0.5
NDE1-203ENST00000570727 TNNI3KQ59H18 835 aa18.19■□□□□ 0.5
NDE1-203ENST00000570727 DOCK3Q8IZD9 2030 aa18.19■□□□□ 0.5
NDE1-203ENST00000570727 GCC1Q96CN9 775 aa18.19■□□□□ 0.5
NDE1-203ENST00000570727 OSBPL5Q9H0X9 879 aaPredicted RBP18.19■□□□□ 0.5
NDE1-203ENST00000570727 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.19■□□□□ 0.5
NDE1-203ENST00000570727 SNRKQ9NRH2 765 aa18.19■□□□□ 0.5
NDE1-203ENST00000570727 LRP2BPQ9P2M1 347 aa18.19■□□□□ 0.5
NDE1-203ENST00000570727 GABRQQ9UN88 632 aa18.19■□□□□ 0.5
NDE1-203ENST00000570727 MYO5AQ9Y4I1 1855 aaKnown RBP18.19■□□□□ 0.5
NDE1-203ENST00000570727 FPGT-TNNI3KV9GXZ4 949 aa18.19■□□□□ 0.5
NDE1-203ENST00000570727 MYPNQ86TC9 1320 aa18.19■□□□□ 0.5
NDE1-203ENST00000570727 TRIM75PA6NK02 468 aa18.18■□□□□ 0.5
NDE1-203ENST00000570727 RAET1EQ8TD07 263 aa18.18■□□□□ 0.5
NDE1-203ENST00000570727 SH3RF3Q8TEJ3 882 aaPredicted RBP18.18■□□□□ 0.5
NDE1-203ENST00000570727 DBNDD2Q9BQY9 259 aa18.18■□□□□ 0.5
NDE1-203ENST00000570727 PCDH10Q9P2E7 1040 aa18.18■□□□□ 0.5
NDE1-203ENST00000570727 ZBTB7BO15156 539 aaPredicted RBP18.17■□□□□ 0.5
NDE1-203ENST00000570727 RLBP1P12271 317 aa18.17■□□□□ 0.5
NDE1-203ENST00000570727 FCGRTP55899 365 aa18.17■□□□□ 0.5
NDE1-203ENST00000570727 PRKCZQ05513 592 aa18.17■□□□□ 0.5
NDE1-203ENST00000570727 TEX11Q8IYF3 940 aa18.17■□□□□ 0.5
NDE1-203ENST00000570727 C1orf115Q9H7X2 142 aa18.17■□□□□ 0.5
NDE1-203ENST00000570727 COL2A1P02458 1487 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms