RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 KCNH4Q9UQ05 1017 aa17.13■□□□□ 0.33
GTF3C1-211ENST00000569653 AKAP2Q9Y2D5 859 aa17.13■□□□□ 0.33
GTF3C1-211ENST00000569653 MROH7-TTC4A0A0A0MT08 1334 aa17.13■□□□□ 0.33
GTF3C1-211ENST00000569653 ADGRA2Q96PE1 1338 aa17.13■□□□□ 0.33
GTF3C1-211ENST00000569653 FOCADQ5VW36 1801 aa17.12■□□□□ 0.33
GTF3C1-211ENST00000569653 CETPP11597 493 aa17.12■□□□□ 0.33
GTF3C1-211ENST00000569653 CTGFP29279 349 aa17.12■□□□□ 0.33
GTF3C1-211ENST00000569653 PPATQ06203 517 aa17.12■□□□□ 0.33
GTF3C1-211ENST00000569653 SNAPC2Q13487 334 aa17.12■□□□□ 0.33
GTF3C1-211ENST00000569653 SSH3Q8TE77 659 aa17.12■□□□□ 0.33
GTF3C1-211ENST00000569653 EFCC1Q9HA90 598 aa17.12■□□□□ 0.33
GTF3C1-211ENST00000569653 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.12■□□□□ 0.33
GTF3C1-211ENST00000569653 GPR75-ASB3A0A0A6YYF3 556 aa17.11■□□□□ 0.33
GTF3C1-211ENST00000569653 ENTPD3O75355 529 aa17.11■□□□□ 0.33
GTF3C1-211ENST00000569653 MAP3K10Q02779 954 aa17.11■□□□□ 0.33
GTF3C1-211ENST00000569653 ZGPATQ8N5A5 531 aaKnown RBP17.11■□□□□ 0.33
GTF3C1-211ENST00000569653 SPATA5Q8NB90 893 aa17.11■□□□□ 0.33
GTF3C1-211ENST00000569653 NSUN4Q96CB9 384 aaKnown RBP17.11■□□□□ 0.33
GTF3C1-211ENST00000569653 HOOK2Q96ED9 719 aa17.11■□□□□ 0.33
GTF3C1-211ENST00000569653 ZFYVE28Q9HCC9 887 aa17.11■□□□□ 0.33
GTF3C1-211ENST00000569653 MGAMO43451 1857 aa17.11■□□□□ 0.33
GTF3C1-211ENST00000569653 TLR2O60603 784 aa17.1■□□□□ 0.33
GTF3C1-211ENST00000569653 ARMC5Q96C12 935 aa17.1■□□□□ 0.33
GTF3C1-211ENST00000569653 DBNDD2Q9BQY9 259 aa17.1■□□□□ 0.33
GTF3C1-211ENST00000569653 FAM196BA6NMK8 535 aa17.09■□□□□ 0.33
GTF3C1-211ENST00000569653 ZBTB7BO15156 539 aaPredicted RBP17.09■□□□□ 0.33
GTF3C1-211ENST00000569653 ATP8B2P98198 1209 aa17.09■□□□□ 0.33
GTF3C1-211ENST00000569653 G3BP1Q13283 466 aaKnown RBP eCLIP17.09■□□□□ 0.331e-6■■■□□ 15.6
GTF3C1-211ENST00000569653 PICALMQ13492 652 aa17.09■□□□□ 0.33
GTF3C1-211ENST00000569653 TNNI3KQ59H18 835 aa17.09■□□□□ 0.33
GTF3C1-211ENST00000569653 GPAT2Q6NUI2 795 aa17.09■□□□□ 0.33
GTF3C1-211ENST00000569653 ERICH6Q7L0X2 663 aa17.09■□□□□ 0.33
GTF3C1-211ENST00000569653 CCDC84Q86UT8 332 aaPredicted RBP17.09■□□□□ 0.33
GTF3C1-211ENST00000569653 ZCCHC17Q9NP64 241 aaKnown RBP17.09■□□□□ 0.33
GTF3C1-211ENST00000569653 SNRKQ9NRH2 765 aa17.09■□□□□ 0.33
GTF3C1-211ENST00000569653 TLR7Q9NYK1 1049 aaKnown RBP17.09■□□□□ 0.33
GTF3C1-211ENST00000569653 PTCH2Q9Y6C5 1203 aa17.09■□□□□ 0.33
GTF3C1-211ENST00000569653 FPGT-TNNI3KV9GXZ4 949 aa17.09■□□□□ 0.33
GTF3C1-211ENST00000569653 SPTY2D1Q68D10 685 aaPredicted RBP17.08■□□□□ 0.32
GTF3C1-211ENST00000569653 C17orf99Q6UX52 265 aa17.08■□□□□ 0.32
GTF3C1-211ENST00000569653 ADGRA1Q86SQ6 560 aa17.08■□□□□ 0.32
GTF3C1-211ENST00000569653 ZBED9Q6R2W3 1325 aa17.07■□□□□ 0.32
GTF3C1-211ENST00000569653 PDHXO00330 501 aa17.07■□□□□ 0.32
GTF3C1-211ENST00000569653 ECM2O94769 699 aaPredicted RBP17.07■□□□□ 0.32
GTF3C1-211ENST00000569653 PTPRAP18433 802 aa17.07■□□□□ 0.32
GTF3C1-211ENST00000569653 LACTBP83111 547 aaPredicted RBP17.07■□□□□ 0.32
GTF3C1-211ENST00000569653 RRP1BQ14684 758 aaKnown RBP17.07■□□□□ 0.32
GTF3C1-211ENST00000569653 ANKRD23Q86SG2 305 aa17.07■□□□□ 0.32
GTF3C1-211ENST00000569653 SCYL3Q8IZE3 742 aa17.07■□□□□ 0.32
GTF3C1-211ENST00000569653 CPA4Q9UI42 421 aa17.07■□□□□ 0.32
GTF3C1-211ENST00000569653 DOCK3Q8IZD9 2030 aa17.07■□□□□ 0.32
GTF3C1-211ENST00000569653 LOC285556D6RIA3 1793 aa17.07■□□□□ 0.32
GTF3C1-211ENST00000569653 SURF6O75683 361 aaKnown RBP17.06■□□□□ 0.32
GTF3C1-211ENST00000569653 ITPRIPQ8IWB1 547 aa17.06■□□□□ 0.32
GTF3C1-211ENST00000569653 ZSCAN29Q8IWY8 852 aaPredicted RBP17.06■□□□□ 0.32
GTF3C1-211ENST00000569653 PANK1Q8TE04 598 aa17.06■□□□□ 0.32
GTF3C1-211ENST00000569653 ZNF333Q96JL9 665 aa17.06■□□□□ 0.32
GTF3C1-211ENST00000569653 GPR108Q9NPR9 543 aa17.06■□□□□ 0.32
GTF3C1-211ENST00000569653 DBNLQ9UJU6 430 aaKnown RBP17.06■□□□□ 0.32
GTF3C1-211ENST00000569653 NOP58Q9Y2X3 529 aaKnown RBP17.06■□□□□ 0.32
GTF3C1-211ENST00000569653 COL2A1P02458 1487 aaPredicted RBP17.05■□□□□ 0.32
GTF3C1-211ENST00000569653 NPM3O75607 178 aaKnown RBP17.05■□□□□ 0.32
GTF3C1-211ENST00000569653 CYP2E1P05181 493 aaPredicted RBP17.05■□□□□ 0.32
GTF3C1-211ENST00000569653 GORABQ5T7V8 394 aa17.05■□□□□ 0.32
GTF3C1-211ENST00000569653 SH3RF3Q8TEJ3 882 aaPredicted RBP17.05■□□□□ 0.32
GTF3C1-211ENST00000569653 PIH1D3Q9NQM4 214 aaKnown RBP17.05■□□□□ 0.32
GTF3C1-211ENST00000569653 RAI14Q9P0K7 980 aa17.05■□□□□ 0.32
GTF3C1-211ENST00000569653 AFG3L2Q9Y4W6 797 aa17.05■□□□□ 0.32
GTF3C1-211ENST00000569653 ZHX2Q9Y6X8 837 aa17.05■□□□□ 0.32
GTF3C1-211ENST00000569653 A0A0G2JLL6 359 aaPredicted RBP17.04■□□□□ 0.32
GTF3C1-211ENST00000569653 UQCRFS1P1P0C7P4 283 aa17.04■□□□□ 0.32
GTF3C1-211ENST00000569653 CYP2C8P10632 490 aa17.04■□□□□ 0.32
GTF3C1-211ENST00000569653 EN2P19622 333 aaPredicted RBP17.04■□□□□ 0.32
GTF3C1-211ENST00000569653 CEP85Q6P2H3 762 aa17.04■□□□□ 0.32
GTF3C1-211ENST00000569653 PRRT2Q7Z6L0 340 aaPredicted RBP17.04■□□□□ 0.32
GTF3C1-211ENST00000569653 SLF2Q8IX21 1173 aa17.04■□□□□ 0.32
GTF3C1-211ENST00000569653 EAF2Q96CJ1 260 aaPredicted RBP17.04■□□□□ 0.32
GTF3C1-211ENST00000569653 TRIM47Q96LD4 638 aa17.04■□□□□ 0.32
GTF3C1-211ENST00000569653 OSBPL5Q9H0X9 879 aaPredicted RBP17.04■□□□□ 0.32
GTF3C1-211ENST00000569653 CXCL11O14625 94 aa17.03■□□□□ 0.32
GTF3C1-211ENST00000569653 SLC34A2O95436 690 aa17.03■□□□□ 0.32
GTF3C1-211ENST00000569653 BCRP11274 1271 aa17.03■□□□□ 0.32
GTF3C1-211ENST00000569653 JAG1P78504 1218 aa17.03■□□□□ 0.32
GTF3C1-211ENST00000569653 FTSJ3Q8IY81 847 aaKnown RBP17.03■□□□□ 0.32
GTF3C1-211ENST00000569653 SH3TC2Q8TF17 1288 aa17.03■□□□□ 0.32
GTF3C1-211ENST00000569653 NDUFB9Q9Y6M9 179 aa17.03■□□□□ 0.32
GTF3C1-211ENST00000569653 MYH1P12882 1939 aa17.02■□□□□ 0.32
GTF3C1-211ENST00000569653 ZAP70P43403 619 aa17.02■□□□□ 0.32
GTF3C1-211ENST00000569653 OS9Q13438 667 aaPredicted RBP17.02■□□□□ 0.32
GTF3C1-211ENST00000569653 SHROOM1Q2M3G4 852 aaPredicted RBP17.02■□□□□ 0.32
GTF3C1-211ENST00000569653 CCDC8Q9H0W5 538 aaPredicted RBP17.02■□□□□ 0.32
GTF3C1-211ENST00000569653 DNAJC18Q9H819 358 aa17.02■□□□□ 0.32
GTF3C1-211ENST00000569653 LRP2BPQ9P2M1 347 aa17.02■□□□□ 0.32
GTF3C1-211ENST00000569653 CEP290O15078 2479 aa17.01■□□□□ 0.31
GTF3C1-211ENST00000569653 TBC1D12O60347 775 aa17.01■□□□□ 0.31
GTF3C1-211ENST00000569653 CTNND1O60716 968 aaKnown RBP17.01■□□□□ 0.31
GTF3C1-211ENST00000569653 MYCP01106 439 aaPredicted RBP17.01■□□□□ 0.31
GTF3C1-211ENST00000569653 GSTO1P78417 241 aa17.01■□□□□ 0.31
GTF3C1-211ENST00000569653 TTC39AQ5SRH9 613 aa17.01■□□□□ 0.31
GTF3C1-211ENST00000569653 PRPF38BQ5VTL8 546 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms