RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 PRPF38BQ5VTL8 546 aaKnown RBP15.37■□□□□ 0.05
SIX1-202ENST00000553535 SPTY2D1Q68D10 685 aaPredicted RBP15.37■□□□□ 0.05
SIX1-202ENST00000553535 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.37■□□□□ 0.05
SIX1-202ENST00000553535 SPDYE1Q8NFV5 336 aaPredicted RBP15.37■□□□□ 0.05
SIX1-202ENST00000553535 FRAT1Q92837 279 aaPredicted RBP15.37■□□□□ 0.05
SIX1-202ENST00000553535 ABCF2Q9UG63 623 aa15.37■□□□□ 0.05
SIX1-202ENST00000553535 PHF20L1A8MW92 1017 aa15.36■□□□□ 0.05
SIX1-202ENST00000553535 MOGSQ13724 837 aa15.36■□□□□ 0.05
SIX1-202ENST00000553535 SH3BP5LQ7L8J4 393 aa15.36■□□□□ 0.05
SIX1-202ENST00000553535 ANKRD23Q86SG2 305 aa15.36■□□□□ 0.05
SIX1-202ENST00000553535 DZIP1Q86YF9 867 aaKnown RBP15.36■□□□□ 0.05
SIX1-202ENST00000553535 SLF2Q8IX21 1173 aa15.36■□□□□ 0.05
SIX1-202ENST00000553535 NEUROD6Q96NK8 337 aa15.36■□□□□ 0.05
SIX1-202ENST00000553535 RBBP6Q7Z6E9 1792 aaKnown RBP15.36■□□□□ 0.05
SIX1-202ENST00000553535 RFX7Q2KHR2 1363 aa15.36■□□□□ 0.05
SIX1-202ENST00000553535 PNMA6EA0A0J9YXQ4 647 aa15.36■□□□□ 0.05
SIX1-202ENST00000553535 LACTBP83111 547 aaPredicted RBP15.36■□□□□ 0.05
SIX1-202ENST00000553535 C17orf99Q6UX52 265 aa15.36■□□□□ 0.05
SIX1-202ENST00000553535 ZNF384Q8TF68 577 aa15.36■□□□□ 0.05
SIX1-202ENST00000553535 CLUAP1Q96AJ1 413 aa15.36■□□□□ 0.05
SIX1-202ENST00000553535 ARHGAP39Q9C0H5 1083 aa15.36■□□□□ 0.05
SIX1-202ENST00000553535 HMG20BQ9P0W2 317 aa15.36■□□□□ 0.05
SIX1-202ENST00000553535 PTCH2Q9Y6C5 1203 aa15.36■□□□□ 0.05
SIX1-202ENST00000553535 GPR75-ASB3A0A0A6YYF3 556 aa15.35■□□□□ 0.05
SIX1-202ENST00000553535 MECOMQ03112 1051 aa15.35■□□□□ 0.05
SIX1-202ENST00000553535 ERICH6Q7L0X2 663 aa15.35■□□□□ 0.05
SIX1-202ENST00000553535 ZNF333Q96JL9 665 aa15.35■□□□□ 0.05
SIX1-202ENST00000553535 DDX4Q9NQI0 724 aaKnown RBP15.35■□□□□ 0.05
SIX1-202ENST00000553535 ZSWIM8A7E2V4 1837 aa15.34■□□□□ 0.05
SIX1-202ENST00000553535 DOCK2Q92608 1830 aa15.34■□□□□ 0.05
SIX1-202ENST00000553535 DDTLA6NHG4 134 aaPredicted RBP15.34■□□□□ 0.05
SIX1-202ENST00000553535 PDHXO00330 501 aa15.34■□□□□ 0.05
SIX1-202ENST00000553535 CXCL11O14625 94 aa15.34■□□□□ 0.05
SIX1-202ENST00000553535 BTDP43251 543 aa15.34■□□□□ 0.05
SIX1-202ENST00000553535 G3BP1Q13283 466 aaKnown RBP eCLIP15.34■□□□□ 0.05
SIX1-202ENST00000553535 MROH7-TTC4A0A0A0MT08 1334 aa15.34■□□□□ 0.05
SIX1-202ENST00000553535 C19orf67A6NJJ6 358 aa15.33■□□□□ 0.05
SIX1-202ENST00000553535 GNRH1P01148 92 aa15.33■□□□□ 0.05
SIX1-202ENST00000553535 EN2P19622 333 aaPredicted RBP15.33■□□□□ 0.05
SIX1-202ENST00000553535 ARID4AP29374 1257 aaPredicted RBP15.33■□□□□ 0.05
SIX1-202ENST00000553535 RHBDL3P58872 404 aa15.33■□□□□ 0.05
SIX1-202ENST00000553535 KIF22Q14807 665 aa15.33■□□□□ 0.05
SIX1-202ENST00000553535 ZKSCAN2Q63HK3 967 aa15.33■□□□□ 0.05
SIX1-202ENST00000553535 GPAT2Q6NUI2 795 aa15.33■□□□□ 0.05
SIX1-202ENST00000553535 PI16Q6UXB8 463 aa15.33■□□□□ 0.05
SIX1-202ENST00000553535 NBPF11Q86T75 865 aa15.33■□□□□ 0.05
SIX1-202ENST00000553535 SCYL3Q8IZE3 742 aa15.33■□□□□ 0.05
SIX1-202ENST00000553535 TMEM57Q8N5G2 664 aa15.33■□□□□ 0.05
SIX1-202ENST00000553535 SPATA5Q8NB90 893 aa15.33■□□□□ 0.05
SIX1-202ENST00000553535 CPA4Q9UI42 421 aa15.33■□□□□ 0.05
SIX1-202ENST00000553535 ADGRA2Q96PE1 1338 aa15.33■□□□□ 0.04
SIX1-202ENST00000553535 SLURP2P0DP57 97 aa15.32■□□□□ 0.04
SIX1-202ENST00000553535 CTGFP29279 349 aa15.32■□□□□ 0.04
SIX1-202ENST00000553535 SLC9C1Q4G0N8 1177 aa15.32■□□□□ 0.04
SIX1-202ENST00000553535 GORABQ5T7V8 394 aa15.32■□□□□ 0.04
SIX1-202ENST00000553535 TBC1D9Q6ZT07 1266 aa15.32■□□□□ 0.04
SIX1-202ENST00000553535 ZSCAN29Q8IWY8 852 aaPredicted RBP15.32■□□□□ 0.04
SIX1-202ENST00000553535 NSUN4Q96CB9 384 aaKnown RBP15.32■□□□□ 0.04
SIX1-202ENST00000553535 LDHCP07864 332 aa15.32■□□□□ 0.04
SIX1-202ENST00000553535 PTPRAP18433 802 aa15.32■□□□□ 0.04
SIX1-202ENST00000553535 TMEM106CQ9BVX2 250 aa15.32■□□□□ 0.04
SIX1-202ENST00000553535 AFG3L2Q9Y4W6 797 aa15.32■□□□□ 0.04
SIX1-202ENST00000553535 ZHX2Q9Y6X8 837 aa15.32■□□□□ 0.04
SIX1-202ENST00000553535 TBC1D12O60347 775 aa15.31■□□□□ 0.04
SIX1-202ENST00000553535 CTNND1O60716 968 aaKnown RBP15.31■□□□□ 0.04
SIX1-202ENST00000553535 MAP4K4O95819 1239 aaPredicted RBP15.31■□□□□ 0.04
SIX1-202ENST00000553535 MCAMP43121 646 aa15.31■□□□□ 0.04
SIX1-202ENST00000553535 PRMT2P55345 433 aa15.31■□□□□ 0.04
SIX1-202ENST00000553535 ATP8B2P98198 1209 aa15.31■□□□□ 0.04
SIX1-202ENST00000553535 PICALMQ13492 652 aa15.31■□□□□ 0.04
SIX1-202ENST00000553535 SSH3Q8TE77 659 aa15.31■□□□□ 0.04
SIX1-202ENST00000553535 GPR108Q9NPR9 543 aa15.31■□□□□ 0.04
SIX1-202ENST00000553535 PICK1Q9NRD5 415 aa15.31■□□□□ 0.04
SIX1-202ENST00000553535 PHIPQ8WWQ0 1821 aa15.3■□□□□ 0.04
SIX1-202ENST00000553535 A0A0G2JLL6 359 aaPredicted RBP15.3■□□□□ 0.04
SIX1-202ENST00000553535 UQCRFS1P1P0C7P4 283 aa15.3■□□□□ 0.04
SIX1-202ENST00000553535 PSMC4P43686 418 aa15.3■□□□□ 0.04
SIX1-202ENST00000553535 GSTO1P78417 241 aa15.3■□□□□ 0.04
SIX1-202ENST00000553535 LHX8Q68G74 356 aa15.3■□□□□ 0.04
SIX1-202ENST00000553535 PRRT2Q7Z6L0 340 aaPredicted RBP15.3■□□□□ 0.04
SIX1-202ENST00000553535 TRIM47Q96LD4 638 aa15.3■□□□□ 0.04
SIX1-202ENST00000553535 PTPRFP10586 1907 aa15.3■□□□□ 0.04
SIX1-202ENST00000553535 BCRP11274 1271 aa15.29■□□□□ 0.04
SIX1-202ENST00000553535 FASTKD5Q7L8L6 764 aaKnown RBP15.29■□□□□ 0.04
SIX1-202ENST00000553535 MIER1Q8N108 512 aa15.29■□□□□ 0.04
SIX1-202ENST00000553535 SH3TC2Q8TF17 1288 aa15.29■□□□□ 0.04
SIX1-202ENST00000553535 RAI14Q9P0K7 980 aa15.29■□□□□ 0.04
SIX1-202ENST00000553535 SRRDQ9UH36 339 aa15.29■□□□□ 0.04
SIX1-202ENST00000553535 DOCK1Q14185 1865 aa15.29■□□□□ 0.04
SIX1-202ENST00000553535 ECM2O94769 699 aaPredicted RBP15.28■□□□□ 0.04
SIX1-202ENST00000553535 CYP2C8P10632 490 aa15.28■□□□□ 0.04
SIX1-202ENST00000553535 HNRNPUQ00839 825 aaKnown RBP eCLIP15.28■□□□□ 0.04
SIX1-202ENST00000553535 PARK7Q99497 189 aaKnown RBP15.28■□□□□ 0.04
SIX1-202ENST00000553535 ZBTB7BO15156 539 aaPredicted RBP15.28■□□□□ 0.04
SIX1-202ENST00000553535 ATXN8OSP0DMR3 200 aa15.28■□□□□ 0.04
SIX1-202ENST00000553535 OSBPP22059 807 aa15.28■□□□□ 0.04
SIX1-202ENST00000553535 HOXD10P28358 340 aa15.28■□□□□ 0.04
SIX1-202ENST00000553535 TNNI3KQ59H18 835 aa15.28■□□□□ 0.04
SIX1-202ENST00000553535 LRP2BPQ9P2M1 347 aa15.28■□□□□ 0.04
SIX1-202ENST00000553535 SLC45A1Q9Y2W3 748 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms