RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 RHBDL3P58872 404 aa10.46□□□□□ -0.73
USP28-203ENST00000537490 MAP3K10Q02779 954 aa10.46□□□□□ -0.73
USP28-203ENST00000537490 MECOMQ03112 1051 aa10.46□□□□□ -0.73
USP28-203ENST00000537490 KIF22Q14807 665 aa10.46□□□□□ -0.73
USP28-203ENST00000537490 SLC9C1Q4G0N8 1177 aa10.46□□□□□ -0.73
USP28-203ENST00000537490 SPTY2D1Q68D10 685 aaPredicted RBP10.46□□□□□ -0.73
USP28-203ENST00000537490 GPAT2Q6NUI2 795 aa10.46□□□□□ -0.73
USP28-203ENST00000537490 PI16Q6UXB8 463 aa10.46□□□□□ -0.73
USP28-203ENST00000537490 TBC1D9Q6ZT07 1266 aa10.46□□□□□ -0.73
USP28-203ENST00000537490 ERICH6Q7L0X2 663 aa10.46□□□□□ -0.73
USP28-203ENST00000537490 ZSCAN29Q8IWY8 852 aaPredicted RBP10.46□□□□□ -0.73
USP28-203ENST00000537490 TMEM106CQ9BVX2 250 aa10.46□□□□□ -0.73
USP28-203ENST00000537490 PDS5AQ29RF7 1337 aaKnown RBP10.46□□□□□ -0.73
USP28-203ENST00000537490 RFX7Q2KHR2 1363 aa10.45□□□□□ -0.74
USP28-203ENST00000537490 MROH7-TTC4A0A0A0MT08 1334 aa10.45□□□□□ -0.74
USP28-203ENST00000537490 ADGRA2Q96PE1 1338 aa10.45□□□□□ -0.74
USP28-203ENST00000537490 GPR75-ASB3A0A0A6YYF3 556 aa10.45□□□□□ -0.74
USP28-203ENST00000537490 CXCL11O14625 94 aa10.45□□□□□ -0.74
USP28-203ENST00000537490 MYCP01106 439 aaPredicted RBP10.45□□□□□ -0.74
USP28-203ENST00000537490 PTPRAP18433 802 aa10.45□□□□□ -0.74
USP28-203ENST00000537490 G3BP1Q13283 466 aaKnown RBP eCLIP10.45□□□□□ -0.74
USP28-203ENST00000537490 PICALMQ13492 652 aa10.45□□□□□ -0.74
USP28-203ENST00000537490 NBPF11Q86T75 865 aa10.45□□□□□ -0.74
USP28-203ENST00000537490 SLF2Q8IX21 1173 aa10.45□□□□□ -0.74
USP28-203ENST00000537490 SCYL3Q8IZE3 742 aa10.45□□□□□ -0.74
USP28-203ENST00000537490 TMEM57Q8N5G2 664 aa10.45□□□□□ -0.74
USP28-203ENST00000537490 SH3TC2Q8TF17 1288 aa10.45□□□□□ -0.74
USP28-203ENST00000537490 ZHX2Q9Y6X8 837 aa10.45□□□□□ -0.74
USP28-203ENST00000537490 KIAA0100Q14667 2235 aaKnown RBP10.45□□□□□ -0.74
USP28-203ENST00000537490 CYP2C8P10632 490 aa10.44□□□□□ -0.74
USP28-203ENST00000537490 ARID4AP29374 1257 aaPredicted RBP10.44□□□□□ -0.74
USP28-203ENST00000537490 PSMC4P43686 418 aa10.44□□□□□ -0.74
USP28-203ENST00000537490 C1QBPQ07021 282 aaKnown RBP10.44□□□□□ -0.74
USP28-203ENST00000537490 GORABQ5T7V8 394 aa10.44□□□□□ -0.74
USP28-203ENST00000537490 SPATA5Q8NB90 893 aa10.44□□□□□ -0.74
USP28-203ENST00000537490 NSUN4Q96CB9 384 aaKnown RBP10.44□□□□□ -0.74
USP28-203ENST00000537490 TRIM47Q96LD4 638 aa10.44□□□□□ -0.74
USP28-203ENST00000537490 PICK1Q9NRD5 415 aa10.44□□□□□ -0.74
USP28-203ENST00000537490 AFG3L2Q9Y4W6 797 aa10.44□□□□□ -0.74
USP28-203ENST00000537490 A0A0G2JLL6 359 aaPredicted RBP10.43□□□□□ -0.74
USP28-203ENST00000537490 CTNND1O60716 968 aaKnown RBP10.43□□□□□ -0.74
USP28-203ENST00000537490 GNRH1P01148 92 aa10.43□□□□□ -0.74
USP28-203ENST00000537490 LDHCP07864 332 aa10.43□□□□□ -0.74
USP28-203ENST00000537490 OSBPP22059 807 aa10.43□□□□□ -0.74
USP28-203ENST00000537490 MCAMP43121 646 aa10.43□□□□□ -0.74
USP28-203ENST00000537490 PRMT2P55345 433 aa10.43□□□□□ -0.74
USP28-203ENST00000537490 POLA2Q14181 598 aa10.43□□□□□ -0.74
USP28-203ENST00000537490 SLC4A8Q2Y0W8 1093 aa10.43□□□□□ -0.74
USP28-203ENST00000537490 ZKSCAN2Q63HK3 967 aa10.43□□□□□ -0.74
USP28-203ENST00000537490 PRRT2Q7Z6L0 340 aaPredicted RBP10.43□□□□□ -0.74
USP28-203ENST00000537490 CCDC84Q86UT8 332 aaPredicted RBP10.43□□□□□ -0.74
USP28-203ENST00000537490 RAI14Q9P0K7 980 aa10.43□□□□□ -0.74
USP28-203ENST00000537490 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.43□□□□□ -0.74
USP28-203ENST00000537490 SRRDQ9UH36 339 aa10.43□□□□□ -0.74
USP28-203ENST00000537490 MYH13Q9UKX3 1938 aa10.43□□□□□ -0.74
USP28-203ENST00000537490 FAM196BA6NMK8 535 aa10.42□□□□□ -0.74
USP28-203ENST00000537490 TBC1D12O60347 775 aa10.42□□□□□ -0.74
USP28-203ENST00000537490 FMNL1O95466 1100 aaPredicted RBP10.42□□□□□ -0.74
USP28-203ENST00000537490 UQCRFS1P1P0C7P4 283 aa10.42□□□□□ -0.74
USP28-203ENST00000537490 BCRP11274 1271 aa10.42□□□□□ -0.74
USP28-203ENST00000537490 GSTO1P78417 241 aa10.42□□□□□ -0.74
USP28-203ENST00000537490 ATP8B2P98198 1209 aa10.42□□□□□ -0.74
USP28-203ENST00000537490 MTFR1Q15390 333 aa10.42□□□□□ -0.74
USP28-203ENST00000537490 GADL1Q6ZQY3 521 aa10.42□□□□□ -0.74
USP28-203ENST00000537490 FASTKD5Q7L8L6 764 aaKnown RBP10.42□□□□□ -0.74
USP28-203ENST00000537490 PARK7Q99497 189 aaKnown RBP10.42□□□□□ -0.74
USP28-203ENST00000537490 DBNDD2Q9BQY9 259 aa10.42□□□□□ -0.74
USP28-203ENST00000537490 C1orf115Q9H7X2 142 aa10.42□□□□□ -0.74
USP28-203ENST00000537490 SNRKQ9NRH2 765 aa10.42□□□□□ -0.74
USP28-203ENST00000537490 ZSWIM8A7E2V4 1837 aa10.42□□□□□ -0.74
USP28-203ENST00000537490 MYH2Q9UKX2 1941 aa10.41□□□□□ -0.74
USP28-203ENST00000537490 TRIM75PA6NK02 468 aa10.41□□□□□ -0.74
USP28-203ENST00000537490 TNRC18O15417 2968 aaPredicted RBP10.41□□□□□ -0.74
USP28-203ENST00000537490 HOXD10P28358 340 aa10.41□□□□□ -0.74
USP28-203ENST00000537490 RRP1BQ14684 758 aaKnown RBP10.41□□□□□ -0.74
USP28-203ENST00000537490 TNNI3KQ59H18 835 aa10.41□□□□□ -0.74
USP28-203ENST00000537490 MIER1Q8N108 512 aa10.41□□□□□ -0.74
USP28-203ENST00000537490 SSH3Q8TE77 659 aa10.41□□□□□ -0.74
USP28-203ENST00000537490 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.41□□□□□ -0.74
USP28-203ENST00000537490 GPR108Q9NPR9 543 aa10.41□□□□□ -0.74
USP28-203ENST00000537490 LRP2BPQ9P2M1 347 aa10.41□□□□□ -0.74
USP28-203ENST00000537490 FPGT-TNNI3KV9GXZ4 949 aa10.41□□□□□ -0.74
USP28-203ENST00000537490 AK9Q5TCS8 1911 aa10.41□□□□□ -0.74
USP28-203ENST00000537490 MYPNQ86TC9 1320 aa10.4□□□□□ -0.74
USP28-203ENST00000537490 ZBTB7BO15156 539 aaPredicted RBP10.4□□□□□ -0.74
USP28-203ENST00000537490 SURF6O75683 361 aaKnown RBP10.4□□□□□ -0.74
USP28-203ENST00000537490 MAP4K4O95819 1239 aaPredicted RBP10.4□□□□□ -0.74
USP28-203ENST00000537490 RLBP1P12271 317 aa10.4□□□□□ -0.74
USP28-203ENST00000537490 GRK4P32298 578 aa10.4□□□□□ -0.74
USP28-203ENST00000537490 HNRNPUQ00839 825 aaKnown RBP eCLIP10.4□□□□□ -0.74
USP28-203ENST00000537490 PRKCZQ05513 592 aa10.4□□□□□ -0.74
USP28-203ENST00000537490 TTC39AQ5SRH9 613 aa10.4□□□□□ -0.74
USP28-203ENST00000537490 TEX11Q8IYF3 940 aa10.4□□□□□ -0.74
USP28-203ENST00000537490 RAET1EQ8TD07 263 aa10.4□□□□□ -0.74
USP28-203ENST00000537490 SH3RF3Q8TEJ3 882 aaPredicted RBP10.4□□□□□ -0.74
USP28-203ENST00000537490 OSBPL5Q9H0X9 879 aaPredicted RBP10.4□□□□□ -0.74
USP28-203ENST00000537490 GABRQQ9UN88 632 aa10.4□□□□□ -0.74
USP28-203ENST00000537490 CYP2E1P05181 493 aaPredicted RBP10.39□□□□□ -0.75
USP28-203ENST00000537490 FCGRTP55899 365 aa10.39□□□□□ -0.75
USP28-203ENST00000537490 SPP2Q13103 211 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms