RNA–Protein interactions for RNA: ENST00000532475.1

NUP98-219, Transcript of nucleoporin 98, humanhuman

TSL 4

Gene NUP98, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-219ENST00000532475 RAET1EQ8TD07 263 aa10.49□□□□□ -0.73
NUP98-219ENST00000532475 U2AF1L4Q8WU68 220 aaKnown RBP10.49□□□□□ -0.73
NUP98-219ENST00000532475 TSR2Q969E8 191 aaKnown RBP10.49□□□□□ -0.73
NUP98-219ENST00000532475 FAM84BQ96KN1 310 aaPredicted RBP10.49□□□□□ -0.73
NUP98-219ENST00000532475 UNC93B1Q9H1C4 597 aa10.49□□□□□ -0.73
NUP98-219ENST00000532475 BIN2Q9UBW5 565 aaPredicted RBP10.49□□□□□ -0.73
NUP98-219ENST00000532475 NR2E3Q9Y5X4 410 aa10.49□□□□□ -0.73
NUP98-219ENST00000532475 LAMA2P24043 3122 aaKnown RBP10.49□□□□□ -0.73
NUP98-219ENST00000532475 FAM205AQ6ZU69 1335 aa10.49□□□□□ -0.73
NUP98-219ENST00000532475 SPEF2Q9C093 1822 aa10.49□□□□□ -0.73
NUP98-219ENST00000532475 PDHXO00330 501 aa10.48□□□□□ -0.73
NUP98-219ENST00000532475 WDHD1O75717 1129 aaPredicted RBP10.48□□□□□ -0.73
NUP98-219ENST00000532475 BRD1O95696 1058 aa10.48□□□□□ -0.73
NUP98-219ENST00000532475 FECHP22830 423 aa10.48□□□□□ -0.73
NUP98-219ENST00000532475 IFIT5Q13325 482 aaKnown RBP10.48□□□□□ -0.73
NUP98-219ENST00000532475 MOGSQ13724 837 aa10.48□□□□□ -0.73
NUP98-219ENST00000532475 POTEHQ6S545 545 aa10.48□□□□□ -0.73
NUP98-219ENST00000532475 Q7L0L9 218 aa10.48□□□□□ -0.73
NUP98-219ENST00000532475 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.48□□□□□ -0.73
NUP98-219ENST00000532475 OXER1Q8TDS5 423 aa10.48□□□□□ -0.73
NUP98-219ENST00000532475 CALR3Q96L12 384 aaKnown RBP10.48□□□□□ -0.73
NUP98-219ENST00000532475 WRNIP1Q96S55 665 aa10.48□□□□□ -0.73
NUP98-219ENST00000532475 ZCCHC17Q9NP64 241 aaKnown RBP10.48□□□□□ -0.73
NUP98-219ENST00000532475 GABRQQ9UN88 632 aa10.48□□□□□ -0.73
NUP98-219ENST00000532475 IQSEC3Q9UPP2 1182 aaPredicted RBP10.48□□□□□ -0.73
NUP98-219ENST00000532475 LAMB1P07942 1786 aa10.47□□□□□ -0.73
NUP98-219ENST00000532475 EVI5O60447 810 aa10.47□□□□□ -0.73
NUP98-219ENST00000532475 FARP2O94887 1054 aaPredicted RBP10.47□□□□□ -0.73
NUP98-219ENST00000532475 SGPL1O95470 568 aa10.47□□□□□ -0.73
NUP98-219ENST00000532475 HOXD10P28358 340 aa10.47□□□□□ -0.73
NUP98-219ENST00000532475 HIBADHP31937 336 aaKnown RBP10.47□□□□□ -0.73
NUP98-219ENST00000532475 INPP5BP32019 993 aa10.47□□□□□ -0.73
NUP98-219ENST00000532475 TNNI2P48788 182 aa10.47□□□□□ -0.73
NUP98-219ENST00000532475 PRKCZQ05513 592 aa10.47□□□□□ -0.73
NUP98-219ENST00000532475 LMBR1LQ6UX01 489 aa10.47□□□□□ -0.73
NUP98-219ENST00000532475 LDHAL6AQ6ZMR3 332 aa10.47□□□□□ -0.73
NUP98-219ENST00000532475 STK31Q9BXU1 1019 aa10.47□□□□□ -0.73
NUP98-219ENST00000532475 PUS3Q9BZE2 481 aaKnown RBP10.47□□□□□ -0.73
NUP98-219ENST00000532475 CHMP3Q9Y3E7 222 aa10.47□□□□□ -0.73
NUP98-219ENST00000532475 MYPNQ86TC9 1320 aa10.47□□□□□ -0.73
NUP98-219ENST00000532475 CYP2C8P10632 490 aa10.46□□□□□ -0.73
NUP98-219ENST00000532475 CLCN1P35523 988 aa10.46□□□□□ -0.73
NUP98-219ENST00000532475 PPIL2Q13356 520 aa10.46□□□□□ -0.73
NUP98-219ENST00000532475 CCDC27Q2M243 656 aa10.46□□□□□ -0.73
NUP98-219ENST00000532475 LINS1Q8NG48 757 aa10.46□□□□□ -0.73
NUP98-219ENST00000532475 DNAAF4Q8WXU2 420 aa10.46□□□□□ -0.73
NUP98-219ENST00000532475 ADGRA2Q96PE1 1338 aa10.46□□□□□ -0.73
NUP98-219ENST00000532475 MYBBP1AQ9BQG0 1328 aaKnown RBP10.46□□□□□ -0.73
NUP98-219ENST00000532475 OTOFQ9HC10 1997 aa10.46□□□□□ -0.74
NUP98-219ENST00000532475 A0A1W2PPC1 479 aa10.45□□□□□ -0.74
NUP98-219ENST00000532475 TFRCP02786 760 aaKnown RBP10.45□□□□□ -0.74
NUP98-219ENST00000532475 ELNP15502 786 aa10.45□□□□□ -0.74
NUP98-219ENST00000532475 PPATQ06203 517 aa10.45□□□□□ -0.74
NUP98-219ENST00000532475 APOBEC3HQ6NTF7 200 aaKnown RBP10.45□□□□□ -0.74
NUP98-219ENST00000532475 ANKRD23Q86SG2 305 aa10.45□□□□□ -0.74
NUP98-219ENST00000532475 DEFB123Q8N688 67 aa10.45□□□□□ -0.74
NUP98-219ENST00000532475 PAWRQ96IZ0 340 aaKnown RBP10.45□□□□□ -0.74
NUP98-219ENST00000532475 DEFB118Q96PH6 123 aa10.45□□□□□ -0.74
NUP98-219ENST00000532475 CNNM1Q9NRU3 951 aa10.45□□□□□ -0.74
NUP98-219ENST00000532475 USTQ9Y2C2 406 aa10.45□□□□□ -0.74
NUP98-219ENST00000532475 PRUNE2Q8WUY3 3088 aa10.44□□□□□ -0.74
NUP98-219ENST00000532475 EYSQ5T1H1 3165 aa10.44□□□□□ -0.74
NUP98-219ENST00000532475 F6X3S4 739 aa10.44□□□□□ -0.74
NUP98-219ENST00000532475 BCRP11274 1271 aa10.44□□□□□ -0.74
NUP98-219ENST00000532475 FLT3LGP49771 235 aa10.44□□□□□ -0.74
NUP98-219ENST00000532475 UBXN2AP68543 259 aa10.44□□□□□ -0.74
NUP98-219ENST00000532475 CALD1Q05682 793 aaKnown RBP10.44□□□□□ -0.74
NUP98-219ENST00000532475 CHAF1AQ13111 956 aaPredicted RBP10.44□□□□□ -0.74
NUP98-219ENST00000532475 DDX10Q13206 875 aaKnown RBP10.44□□□□□ -0.74
NUP98-219ENST00000532475 FKBP5Q13451 457 aaPredicted RBP10.44□□□□□ -0.74
NUP98-219ENST00000532475 CCDC57Q2TAC2 916 aa10.44□□□□□ -0.74
NUP98-219ENST00000532475 TWISTNBQ3B726 338 aaPredicted RBP10.44□□□□□ -0.74
NUP98-219ENST00000532475 GPAT2Q6NUI2 795 aa10.44□□□□□ -0.74
NUP98-219ENST00000532475 DIS3LQ8TF46 1054 aaKnown RBP10.44□□□□□ -0.74
NUP98-219ENST00000532475 GDF15Q99988 308 aa10.44□□□□□ -0.74
NUP98-219ENST00000532475 COL25A1Q9BXS0 654 aaPredicted RBP10.44□□□□□ -0.74
NUP98-219ENST00000532475 CHMP4AQ9BY43 222 aa10.44□□□□□ -0.74
NUP98-219ENST00000532475 MYH16Q9H6N6 1097 aa10.44□□□□□ -0.74
NUP98-219ENST00000532475 MYH3P11055 1940 aa10.44□□□□□ -0.74
NUP98-219ENST00000532475 ADCY3O60266 1144 aa10.43□□□□□ -0.74
NUP98-219ENST00000532475 UBE4AQ14139 1066 aa10.43□□□□□ -0.74
NUP98-219ENST00000532475 FBXO33Q7Z6M2 555 aa10.43□□□□□ -0.74
NUP98-219ENST00000532475 FAM83AQ86UY5 434 aa10.43□□□□□ -0.74
NUP98-219ENST00000532475 BANK1Q8NDB2 785 aa10.43□□□□□ -0.74
NUP98-219ENST00000532475 REPIN1Q9BWE0 567 aaKnown RBP10.43□□□□□ -0.74
NUP98-219ENST00000532475 GPCPD1Q9NPB8 672 aa10.43□□□□□ -0.74
NUP98-219ENST00000532475 ZMYND8Q9ULU4 1186 aaPredicted RBP10.43□□□□□ -0.74
NUP98-219ENST00000532475 KCNH4Q9UQ05 1017 aa10.43□□□□□ -0.74
NUP98-219ENST00000532475 ECM29Q5VYK3 1845 aa10.42□□□□□ -0.74
NUP98-219ENST00000532475 INHAP05111 366 aa10.42□□□□□ -0.74
NUP98-219ENST00000532475 BCAMP50895 628 aa10.42□□□□□ -0.74
NUP98-219ENST00000532475 FCGRTP55899 365 aa10.42□□□□□ -0.74
NUP98-219ENST00000532475 HDLBPQ00341 1268 aaKnown RBP10.42□□□□□ -0.74
NUP98-219ENST00000532475 TCP10Q12799 353 aa10.42□□□□□ -0.74
NUP98-219ENST00000532475 DSG2Q14126 1118 aa10.42□□□□□ -0.74
NUP98-219ENST00000532475 TAF7LQ5H9L4 462 aa10.42□□□□□ -0.74
NUP98-219ENST00000532475 BEND3Q5T5X7 828 aa10.42□□□□□ -0.74
NUP98-219ENST00000532475 SLAIN1Q8ND83 568 aa10.42□□□□□ -0.74
NUP98-219ENST00000532475 TEKT1Q969V4 418 aa10.42□□□□□ -0.74
NUP98-219ENST00000532475 ZDHHC15Q96MV8 337 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms