RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 MRPL12P52815 198 aaKnown RBP9.39□□□□□ -0.91
CHD7-203ENST00000525508 FAM160A1Q05DH4 1040 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 WDR66Q8TBY9 1149 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 LEO1Q8WVC0 666 aaPredicted RBP9.39□□□□□ -0.91
CHD7-203ENST00000525508 TMEM87BQ96K49 555 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 DBNLQ9UJU6 430 aaKnown RBP9.39□□□□□ -0.91
CHD7-203ENST00000525508 TRIM37O94972 964 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 DEXIO95424 95 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 FGAP02671 866 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 SPAG1Q07617 926 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 LONRF3Q496Y0 759 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 LRRC27Q9C0I9 530 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 ERVV-2B6SEH9 535 aa9.38□□□□□ -0.91
CHD7-203ENST00000525508 PDE6AP16499 860 aa9.38□□□□□ -0.91
CHD7-203ENST00000525508 PDE4DQ08499 809 aa9.38□□□□□ -0.91
CHD7-203ENST00000525508 RILPL1Q5EBL4 403 aa9.38□□□□□ -0.91
CHD7-203ENST00000525508 CDCA7Q9BWT1 371 aaPredicted RBP9.38□□□□□ -0.91
CHD7-203ENST00000525508 BCS1LQ9Y276 419 aa9.38□□□□□ -0.91
CHD7-203ENST00000525508 PPIP5K2O43314 1243 aa9.38□□□□□ -0.91
CHD7-203ENST00000525508 SORBS3O60504 671 aa9.38□□□□□ -0.91
CHD7-203ENST00000525508 MAP9Q49MG5 647 aa9.38□□□□□ -0.91
CHD7-203ENST00000525508 BLZF1Q9H2G9 400 aa9.38□□□□□ -0.91
CHD7-203ENST00000525508 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.38□□□□□ -0.91
CHD7-203ENST00000525508 ADGRL2O95490 1459 aa9.38□□□□□ -0.91
CHD7-203ENST00000525508 MBD5Q9P267 1494 aa9.38□□□□□ -0.91
CHD7-203ENST00000525508 HSPD1P10809 573 aaKnown RBP9.38□□□□□ -0.91
CHD7-203ENST00000525508 PLCB3Q01970 1234 aa9.38□□□□□ -0.91
CHD7-203ENST00000525508 TPCN1Q9ULQ1 816 aa9.38□□□□□ -0.91
CHD7-203ENST00000525508 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.38□□□□□ -0.912e-6■■■□□ 15.5
CHD7-203ENST00000525508 RNF123Q5XPI4 1314 aa9.38□□□□□ -0.91
CHD7-203ENST00000525508 GOLGA6L10A0A0M3HER8 536 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 ATP2C2O75185 946 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 ZNF202O95125 648 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 EEF2P13639 858 aaKnown RBP9.37□□□□□ -0.91
CHD7-203ENST00000525508 NF2P35240 595 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 MAP2K1Q02750 393 aaPredicted RBP9.37□□□□□ -0.91
CHD7-203ENST00000525508 KIAA0753Q2KHM9 967 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 ZNF569Q5MCW4 686 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 CTAGE1Q96RT6 745 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 CTNND2Q9UQB3 1225 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 CCDC169A6NNP5 214 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 RHOXF2BP0C7M4 288 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 MYL5Q02045 173 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 TBC1D8BQ0IIM8 1120 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 KIF5AQ12840 1032 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 CTR9Q6PD62 1173 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 RHOXF2Q9BQY4 288 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 USP40Q9NVE5 1235 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 TMEM63CQ9P1W3 806 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 LUC7L2Q9Y383 392 aaKnown RBP9.37□□□□□ -0.91
CHD7-203ENST00000525508 SPATA31E1Q6ZUB1 1445 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 CRKLP46109 303 aaKnown RBP9.37□□□□□ -0.91
CHD7-203ENST00000525508 LMAN1P49257 510 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 SLFNL1Q499Z3 407 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 TTC38Q5R3I4 469 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 NELFCDQ8IXH7 590 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 ZBTB38Q8NAP3 1195 aaPredicted RBP9.37□□□□□ -0.91
CHD7-203ENST00000525508 TBC1D5Q92609 795 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 ARHGEF10O15013 1369 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 ZNF335Q9H4Z2 1342 aaPredicted RBP9.37□□□□□ -0.91
CHD7-203ENST00000525508 ARID4AP29374 1257 aaPredicted RBP9.37□□□□□ -0.91
CHD7-203ENST00000525508 CHRNDQ07001 517 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 NCAPH2Q6IBW4 605 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 FAM196AQ6ZSG2 479 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 LRRC47Q8N1G4 583 aaKnown RBP9.37□□□□□ -0.91
CHD7-203ENST00000525508 PSMB7Q99436 277 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 ZMYM4Q5VZL5 1548 aa9.37□□□□□ -0.91
CHD7-203ENST00000525508 A0A087WWV3 80 aa9.36□□□□□ -0.91
CHD7-203ENST00000525508 CD2BP2O95400 341 aaKnown RBP9.36□□□□□ -0.91
CHD7-203ENST00000525508 CCDC175P0C221 793 aa9.36□□□□□ -0.91
CHD7-203ENST00000525508 PPM1FP49593 454 aaPredicted RBP9.36□□□□□ -0.91
CHD7-203ENST00000525508 ZNF827Q17R98 1081 aa9.36□□□□□ -0.91
CHD7-203ENST00000525508 DNAJC21Q5F1R6 531 aaKnown RBP9.36□□□□□ -0.91
CHD7-203ENST00000525508 RNF187Q5TA31 235 aaPredicted RBP9.36□□□□□ -0.91
CHD7-203ENST00000525508 RDH13Q8NBN7 331 aa9.36□□□□□ -0.91
CHD7-203ENST00000525508 NEK11Q8NG66 645 aa9.36□□□□□ -0.91
CHD7-203ENST00000525508 INSRP06213 1382 aa9.36□□□□□ -0.91
CHD7-203ENST00000525508 FRMPD2Q68DX3 1309 aaPredicted RBP9.36□□□□□ -0.91
CHD7-203ENST00000525508 KDM6BO15054 1643 aa9.36□□□□□ -0.91
CHD7-203ENST00000525508 SMIM23A6NLE4 172 aa9.36□□□□□ -0.91
CHD7-203ENST00000525508 HERC4Q5GLZ8 1057 aaPredicted RBP9.36□□□□□ -0.91
CHD7-203ENST00000525508 SV2BQ7L1I2 683 aa9.36□□□□□ -0.91
CHD7-203ENST00000525508 IFNL3Q8IZI9 196 aa9.36□□□□□ -0.91
CHD7-203ENST00000525508 ZNF654Q8IZM8 581 aa9.36□□□□□ -0.91
CHD7-203ENST00000525508 NAA15Q9BXJ9 866 aaKnown RBP9.36□□□□□ -0.91
CHD7-203ENST00000525508 CGNQ9P2M7 1197 aaKnown RBP9.36□□□□□ -0.91
CHD7-203ENST00000525508 BIN2Q9UBW5 565 aaPredicted RBP9.36□□□□□ -0.91
CHD7-203ENST00000525508 BTBD18B2RXH4 712 aa9.36□□□□□ -0.91
CHD7-203ENST00000525508 ZNF354CQ86Y25 554 aa9.36□□□□□ -0.91
CHD7-203ENST00000525508 KIFC2Q96AC6 838 aa9.36□□□□□ -0.91
CHD7-203ENST00000525508 USP28Q96RU2 1077 aa9.36□□□□□ -0.91
CHD7-203ENST00000525508 RBM28Q9NW13 759 aaKnown RBP9.36□□□□□ -0.91
CHD7-203ENST00000525508 MROH5Q6ZUA9 1318 aa9.36□□□□□ -0.91
CHD7-203ENST00000525508 PPARAQ07869 468 aa9.36□□□□□ -0.91
CHD7-203ENST00000525508 TRAF1Q13077 416 aa9.36□□□□□ -0.91
CHD7-203ENST00000525508 BIRC3Q13489 604 aa9.36□□□□□ -0.91
CHD7-203ENST00000525508 ZNF589Q86UQ0 364 aaPredicted RBP9.36□□□□□ -0.91
CHD7-203ENST00000525508 SYNE4Q8N205 404 aa9.36□□□□□ -0.91
CHD7-203ENST00000525508 SNX29Q8TEQ0 813 aa9.36□□□□□ -0.91
CHD7-203ENST00000525508 PRIMPOLQ96LW4 560 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms