RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 FAM205AQ6ZU69 1335 aa10.86□□□□□ -0.67
NR1I3-228ENST00000511676 IDH1O75874 414 aaKnown RBP10.86□□□□□ -0.67
NR1I3-228ENST00000511676 PSMA5P28066 241 aa10.86□□□□□ -0.67
NR1I3-228ENST00000511676 NT5C2P49902 561 aa10.86□□□□□ -0.67
NR1I3-228ENST00000511676 ZNF280AP59817 542 aaPredicted RBP10.86□□□□□ -0.67
NR1I3-228ENST00000511676 ALX1Q15699 326 aa10.86□□□□□ -0.67
NR1I3-228ENST00000511676 TBC1D10BQ4KMP7 808 aaPredicted RBP10.86□□□□□ -0.67
NR1I3-228ENST00000511676 PI16Q6UXB8 463 aa10.86□□□□□ -0.67
NR1I3-228ENST00000511676 SAMD7Q7Z3H4 446 aa10.86□□□□□ -0.67
NR1I3-228ENST00000511676 CTU1Q7Z7A3 348 aaKnown RBP10.86□□□□□ -0.67
NR1I3-228ENST00000511676 ZNF589Q86UQ0 364 aaPredicted RBP10.86□□□□□ -0.67
NR1I3-228ENST00000511676 HSCBQ8IWL3 235 aa10.86□□□□□ -0.67
NR1I3-228ENST00000511676 OSBP2Q969R2 916 aa10.86□□□□□ -0.67
NR1I3-228ENST00000511676 POLLQ9UGP5 575 aa10.86□□□□□ -0.67
NR1I3-228ENST00000511676 RBM8AQ9Y5S9 174 aaKnown RBP10.86□□□□□ -0.67
NR1I3-228ENST00000511676 NDUFB9Q9Y6M9 179 aa10.86□□□□□ -0.67
NR1I3-228ENST00000511676 SNAP23O00161 211 aa10.85□□□□□ -0.67
NR1I3-228ENST00000511676 FRAT2O75474 233 aaPredicted RBP10.85□□□□□ -0.67
NR1I3-228ENST00000511676 HMGB1P09429 215 aaKnown RBP10.85□□□□□ -0.67
NR1I3-228ENST00000511676 HIRAP54198 1017 aaPredicted RBP10.85□□□□□ -0.67
NR1I3-228ENST00000511676 KIF23Q02241 960 aaPredicted RBP10.85□□□□□ -0.67
NR1I3-228ENST00000511676 PTH1RQ03431 593 aa10.85□□□□□ -0.67
NR1I3-228ENST00000511676 STRIP1Q5VSL9 837 aa10.85□□□□□ -0.67
NR1I3-228ENST00000511676 APOBEC3FQ8IUX4 373 aaKnown RBP10.85□□□□□ -0.67
NR1I3-228ENST00000511676 ALDH8A1Q9H2A2 487 aaPredicted RBP10.85□□□□□ -0.67
NR1I3-228ENST00000511676 MYOZ2Q9NPC6 264 aa10.85□□□□□ -0.67
NR1I3-228ENST00000511676 LRP2BPQ9P2M1 347 aa10.85□□□□□ -0.67
NR1I3-228ENST00000511676 ZNF532Q9HCE3 1301 aa10.84□□□□□ -0.67
NR1I3-228ENST00000511676 YDJCA8MPS7 323 aa10.84□□□□□ -0.67
NR1I3-228ENST00000511676 GPAA1O43292 621 aa10.84□□□□□ -0.67
NR1I3-228ENST00000511676 PPP1R12BO60237 982 aaPredicted RBP10.84□□□□□ -0.67
NR1I3-228ENST00000511676 TRPA1O75762 1119 aa10.84□□□□□ -0.67
NR1I3-228ENST00000511676 SLC34A2O95436 690 aa10.84□□□□□ -0.67
NR1I3-228ENST00000511676 SLC10A3P09131 477 aa10.84□□□□□ -0.67
NR1I3-228ENST00000511676 HSPD1P10809 573 aaKnown RBP10.84□□□□□ -0.67
NR1I3-228ENST00000511676 FKBP1AP62942 108 aaKnown RBP10.84□□□□□ -0.67
NR1I3-228ENST00000511676 GSTO1P78417 241 aa10.84□□□□□ -0.67
NR1I3-228ENST00000511676 TTLL12Q14166 644 aaPredicted RBP10.84□□□□□ -0.67
NR1I3-228ENST00000511676 SUPT20HL1Q3ZLR7 823 aa10.84□□□□□ -0.67
NR1I3-228ENST00000511676 CREB3L3Q68CJ9 461 aa10.84□□□□□ -0.67
NR1I3-228ENST00000511676 GIMAP6Q6P9H5 292 aa10.84□□□□□ -0.67
NR1I3-228ENST00000511676 ERICH6Q7L0X2 663 aa10.84□□□□□ -0.67
NR1I3-228ENST00000511676 SLF2Q8IX21 1173 aa10.84□□□□□ -0.67
NR1I3-228ENST00000511676 TRPM4Q8TD43 1214 aa10.84□□□□□ -0.67
NR1I3-228ENST00000511676 TBC1D2Q9BYX2 928 aa10.84□□□□□ -0.67
NR1I3-228ENST00000511676 CD209Q9NNX6 404 aa10.84□□□□□ -0.67
NR1I3-228ENST00000511676 PPP2R3BQ9Y5P8 575 aa10.84□□□□□ -0.67
NR1I3-228ENST00000511676 SNX14Q9Y5W7 946 aa10.84□□□□□ -0.67
NR1I3-228ENST00000511676 K7ELQ4 463 aaPredicted RBP10.83□□□□□ -0.68
NR1I3-228ENST00000511676 SLC27A2O14975 620 aa10.83□□□□□ -0.68
NR1I3-228ENST00000511676 DOK7Q18PE1 504 aa10.83□□□□□ -0.68
NR1I3-228ENST00000511676 IFNLR1Q8IU57 520 aaPredicted RBP10.83□□□□□ -0.68
NR1I3-228ENST00000511676 RNF186Q9NXI6 227 aa10.83□□□□□ -0.68
NR1I3-228ENST00000511676 GGA3Q9NZ52 723 aa10.83□□□□□ -0.68
NR1I3-228ENST00000511676 MYH13Q9UKX3 1938 aa10.83□□□□□ -0.68
NR1I3-228ENST00000511676 M0R2C6 588 aa10.82□□□□□ -0.68
NR1I3-228ENST00000511676 LDHCP07864 332 aa10.82□□□□□ -0.68
NR1I3-228ENST00000511676 KLRK1P26718 216 aa10.82□□□□□ -0.68
NR1I3-228ENST00000511676 ANKRD1Q15327 319 aa10.82□□□□□ -0.68
NR1I3-228ENST00000511676 VPS53Q5VIR6 699 aa10.82□□□□□ -0.68
NR1I3-228ENST00000511676 NAA16Q6N069 864 aaPredicted RBP10.82□□□□□ -0.68
NR1I3-228ENST00000511676 TXNRD3Q86VQ6 643 aa10.82□□□□□ -0.68
NR1I3-228ENST00000511676 MAGEB6Q8N7X4 407 aa10.82□□□□□ -0.68
NR1I3-228ENST00000511676 NSUN4Q96CB9 384 aaKnown RBP10.82□□□□□ -0.68
NR1I3-228ENST00000511676 CDCA5Q96FF9 252 aa10.82□□□□□ -0.68
NR1I3-228ENST00000511676 FAM163AQ96GL9 167 aaPredicted RBP10.82□□□□□ -0.68
NR1I3-228ENST00000511676 STRBPQ96SI9 672 aaKnown RBP10.82□□□□□ -0.68
NR1I3-228ENST00000511676 NACAP1Q9BZK3 213 aa10.82□□□□□ -0.68
NR1I3-228ENST00000511676 PUS7LQ9H0K6 701 aaKnown RBP10.82□□□□□ -0.68
NR1I3-228ENST00000511676 ZSWIM6Q9HCJ5 1215 aa10.82□□□□□ -0.68
NR1I3-228ENST00000511676 PALD1Q9ULE6 856 aa10.82□□□□□ -0.68
NR1I3-228ENST00000511676 THSD7BQ9C0I4 1608 aa10.82□□□□□ -0.68
NR1I3-228ENST00000511676 WDR19Q8NEZ3 1342 aa10.82□□□□□ -0.68
NR1I3-228ENST00000511676 LDHBP07195 334 aaKnown RBP10.81□□□□□ -0.68
NR1I3-228ENST00000511676 PCP11498 1178 aaKnown RBP10.81□□□□□ -0.68
NR1I3-228ENST00000511676 CYP7A1P22680 504 aa10.81□□□□□ -0.68
NR1I3-228ENST00000511676 TM4SF4P48230 202 aa10.81□□□□□ -0.68
NR1I3-228ENST00000511676 TNFAIP1Q13829 316 aa10.81□□□□□ -0.68
NR1I3-228ENST00000511676 IMMTQ16891 758 aaKnown RBP10.81□□□□□ -0.68
NR1I3-228ENST00000511676 ANGEL2Q5VTE6 544 aaKnown RBP10.81□□□□□ -0.68
NR1I3-228ENST00000511676 TTLL5Q6EMB2 1281 aa10.81□□□□□ -0.68
NR1I3-228ENST00000511676 FBXL16Q8N461 479 aa10.81□□□□□ -0.68
NR1I3-228ENST00000511676 HOOK2Q96ED9 719 aa10.81□□□□□ -0.68
NR1I3-228ENST00000511676 CSRNP1Q96S65 589 aa10.81□□□□□ -0.68
NR1I3-228ENST00000511676 SEC62Q99442 399 aaKnown RBP10.81□□□□□ -0.68
NR1I3-228ENST00000511676 MRIQ9BWK5 157 aa10.81□□□□□ -0.68
NR1I3-228ENST00000511676 RAI14Q9P0K7 980 aa10.81□□□□□ -0.68
NR1I3-228ENST00000511676 ABCF2Q9UG63 623 aa10.81□□□□□ -0.68
NR1I3-228ENST00000511676 CYP46A1Q9Y6A2 500 aa10.81□□□□□ -0.68
NR1I3-228ENST00000511676 MANSC4A6NHS7 340 aaPredicted RBP10.8□□□□□ -0.68
NR1I3-228ENST00000511676 WTIPA6NIX2 430 aaPredicted RBP10.8□□□□□ -0.68
NR1I3-228ENST00000511676 FAM155AB1AL88 458 aaPredicted RBP10.8□□□□□ -0.68
NR1I3-228ENST00000511676 PATL2C9JE40 543 aaKnown RBP10.8□□□□□ -0.68
NR1I3-228ENST00000511676 FOXP2O15409 715 aa10.8□□□□□ -0.68
NR1I3-228ENST00000511676 CYP21A2P08686 494 aa10.8□□□□□ -0.68
NR1I3-228ENST00000511676 PLCG2P16885 1265 aa10.8□□□□□ -0.68
NR1I3-228ENST00000511676 NEK4P51957 841 aa10.8□□□□□ -0.68
NR1I3-228ENST00000511676 MECOMQ03112 1051 aa10.8□□□□□ -0.68
NR1I3-228ENST00000511676 CCDC129Q6ZRS4 1044 aa10.8□□□□□ -0.68
NR1I3-228ENST00000511676 RUFY3Q7L099 469 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms