RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 TCRBV5S4A2TA0A5A2 114 aa22.15■■□□□ 1.14
CLDND1-220ENST00000508902 IGHDP01880 384 aa22.15■■□□□ 1.14
CLDND1-220ENST00000508902 LDHCP07864 332 aa22.15■■□□□ 1.14
CLDND1-220ENST00000508902 CYP7A1P22680 504 aa22.15■■□□□ 1.14
CLDND1-220ENST00000508902 MAP2K1Q02750 393 aaPredicted RBP22.15■■□□□ 1.14
CLDND1-220ENST00000508902 VGLL4Q14135 290 aa22.15■■□□□ 1.14
CLDND1-220ENST00000508902 WNK4Q96J92 1243 aa22.15■■□□□ 1.14
CLDND1-220ENST00000508902 HAUS7Q99871 368 aa22.15■■□□□ 1.14
CLDND1-220ENST00000508902 SNCAIPQ9Y6H5 919 aa22.15■■□□□ 1.14
CLDND1-220ENST00000508902 COL2A1P02458 1487 aaPredicted RBP22.15■■□□□ 1.14
CLDND1-220ENST00000508902 INPP5BP32019 993 aa22.14■■□□□ 1.13
CLDND1-220ENST00000508902 IREB2P48200 963 aaKnown RBP22.14■■□□□ 1.13
CLDND1-220ENST00000508902 MIGA1Q8NAN2 632 aa22.14■■□□□ 1.13
CLDND1-220ENST00000508902 ELP3Q9H9T3 547 aa22.14■■□□□ 1.13
CLDND1-220ENST00000508902 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.14■■□□□ 1.13
CLDND1-220ENST00000508902 PHIPQ8WWQ0 1821 aa22.14■■□□□ 1.13
CLDND1-220ENST00000508902 MYH1P12882 1939 aa22.14■■□□□ 1.13
CLDND1-220ENST00000508902 NPM3O75607 178 aaKnown RBP22.13■■□□□ 1.13
CLDND1-220ENST00000508902 PDE6AP16499 860 aa22.13■■□□□ 1.13
CLDND1-220ENST00000508902 TEX11Q8IYF3 940 aa22.13■■□□□ 1.13
CLDND1-220ENST00000508902 ANKRD13AQ8IZ07 590 aa22.13■■□□□ 1.13
CLDND1-220ENST00000508902 ZKSCAN4Q969J2 545 aaPredicted RBP22.13■■□□□ 1.13
CLDND1-220ENST00000508902 OSBPL5Q9H0X9 879 aaPredicted RBP22.13■■□□□ 1.13
CLDND1-220ENST00000508902 ZNF112Q9UJU3 913 aa22.13■■□□□ 1.13
CLDND1-220ENST00000508902 DOCK1Q14185 1865 aa22.12■■□□□ 1.13
CLDND1-220ENST00000508902 NAV1Q8NEY1 1877 aa22.12■■□□□ 1.13
CLDND1-220ENST00000508902 COL13A1Q5TAT6 717 aaPredicted RBP22.12■■□□□ 1.13
CLDND1-220ENST00000508902 WRNIP1Q96S55 665 aa22.12■■□□□ 1.13
CLDND1-220ENST00000508902 RIOK1Q9BRS2 568 aaKnown RBP22.12■■□□□ 1.13
CLDND1-220ENST00000508902 ECHDC1Q9NTX5 307 aa22.12■■□□□ 1.13
CLDND1-220ENST00000508902 PAG1Q9NWQ8 432 aa22.12■■□□□ 1.13
CLDND1-220ENST00000508902 ATAD5Q96QE3 1844 aa22.11■■□□□ 1.13
CLDND1-220ENST00000508902 CASP8AP2Q9UKL3 1982 aa22.11■■□□□ 1.13
CLDND1-220ENST00000508902 FAM196BA6NMK8 535 aa22.11■■□□□ 1.13
CLDND1-220ENST00000508902 PHF20L1A8MW92 1017 aa22.11■■□□□ 1.13
CLDND1-220ENST00000508902 MAP3K9P80192 1104 aa22.11■■□□□ 1.13
CLDND1-220ENST00000508902 MAP3K10Q02779 954 aa22.11■■□□□ 1.13
CLDND1-220ENST00000508902 PI4K2BQ8TCG2 481 aa22.11■■□□□ 1.13
CLDND1-220ENST00000508902 FLT1P17948 1338 aa22.1■■□□□ 1.13
CLDND1-220ENST00000508902 UNCXA6NJT0 531 aa22.1■■□□□ 1.13
CLDND1-220ENST00000508902 IGSF3O75054 1194 aa22.1■■□□□ 1.13
CLDND1-220ENST00000508902 LBX1P52954 281 aa22.1■■□□□ 1.13
CLDND1-220ENST00000508902 MAP3K12Q12852 859 aa22.1■■□□□ 1.13
CLDND1-220ENST00000508902 SLC10A4Q96EP9 437 aa22.1■■□□□ 1.13
CLDND1-220ENST00000508902 PTPRFP10586 1907 aa22.1■■□□□ 1.13
CLDND1-220ENST00000508902 ZNF532Q9HCE3 1301 aa22.09■■□□□ 1.13
CLDND1-220ENST00000508902 MAP4K4O95819 1239 aaPredicted RBP22.09■■□□□ 1.13
CLDND1-220ENST00000508902 AAMPQ13685 434 aa22.09■■□□□ 1.13
CLDND1-220ENST00000508902 RRP1BQ14684 758 aaKnown RBP22.09■■□□□ 1.13
CLDND1-220ENST00000508902 MAPKAPK5Q8IW41 473 aa22.09■■□□□ 1.13
CLDND1-220ENST00000508902 SMC5Q8IY18 1101 aa22.09■■□□□ 1.13
CLDND1-220ENST00000508902 TGFBRAP1Q8WUH2 860 aa22.09■■□□□ 1.13
CLDND1-220ENST00000508902 OPTNQ96CV9 577 aa22.09■■□□□ 1.13
CLDND1-220ENST00000508902 ZNF341Q9BYN7 854 aa22.09■■□□□ 1.13
CLDND1-220ENST00000508902 RNF186Q9NXI6 227 aa22.09■■□□□ 1.13
CLDND1-220ENST00000508902 ADD2P35612 726 aa22.08■■□□□ 1.13
CLDND1-220ENST00000508902 TM4SF4P48230 202 aa22.08■■□□□ 1.13
CLDND1-220ENST00000508902 CTCFP49711 727 aaPredicted RBP22.08■■□□□ 1.13
CLDND1-220ENST00000508902 TTF1Q15361 905 aaPredicted RBP22.08■■□□□ 1.13
CLDND1-220ENST00000508902 SLC9C2Q5TAH2 1124 aa22.08■■□□□ 1.13
CLDND1-220ENST00000508902 DCAF15Q66K64 600 aa22.08■■□□□ 1.13
CLDND1-220ENST00000508902 AIDAQ96BJ3 306 aa22.08■■□□□ 1.13
CLDND1-220ENST00000508902 DNAJC18Q9H819 358 aa22.08■■□□□ 1.13
CLDND1-220ENST00000508902 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.08■■□□□ 1.13
CLDND1-220ENST00000508902 SPDYE5A6NIY4 337 aa22.07■■□□□ 1.12
CLDND1-220ENST00000508902 IGF2BP3O00425 579 aaKnown RBP eCLIP22.07■■□□□ 1.12
CLDND1-220ENST00000508902 ZBTB48P10074 688 aaPredicted RBP22.07■■□□□ 1.12
CLDND1-220ENST00000508902 EVX2Q03828 476 aa22.07■■□□□ 1.12
CLDND1-220ENST00000508902 ANKRD45Q5TZF3 282 aa22.07■■□□□ 1.12
CLDND1-220ENST00000508902 MS4A4AQ96JQ5 239 aa22.07■■□□□ 1.12
CLDND1-220ENST00000508902 BAZ2AQ9UIF9 1905 aaKnown RBP22.07■■□□□ 1.12
CLDND1-220ENST00000508902 BAG3O95817 575 aa22.06■■□□□ 1.12
CLDND1-220ENST00000508902 ZSCAN29Q8IWY8 852 aaPredicted RBP22.06■■□□□ 1.12
CLDND1-220ENST00000508902 LCORLQ8N3X6 602 aa22.06■■□□□ 1.12
CLDND1-220ENST00000508902 GCC1Q96CN9 775 aa22.06■■□□□ 1.12
CLDND1-220ENST00000508902 PTPN18Q99952 460 aa22.06■■□□□ 1.12
CLDND1-220ENST00000508902 R3HDMLQ9H3Y0 253 aa22.06■■□□□ 1.12
CLDND1-220ENST00000508902 SHROOM1Q2M3G4 852 aaPredicted RBP22.05■■□□□ 1.12
CLDND1-220ENST00000508902 NOL9Q5SY16 702 aaKnown RBP22.05■■□□□ 1.12
CLDND1-220ENST00000508902 OTUD5Q96G74 571 aa22.05■■□□□ 1.12
CLDND1-220ENST00000508902 TRPA1O75762 1119 aa22.04■■□□□ 1.12
CLDND1-220ENST00000508902 PLCG2P16885 1265 aa22.04■■□□□ 1.12
CLDND1-220ENST00000508902 SLC4A8Q2Y0W8 1093 aa22.04■■□□□ 1.12
CLDND1-220ENST00000508902 HOOK2Q96ED9 719 aa22.04■■□□□ 1.12
CLDND1-220ENST00000508902 NOL10Q9BSC4 688 aaKnown RBP22.04■■□□□ 1.12
CLDND1-220ENST00000508902 SAP30BPQ9UHR5 308 aaKnown RBP22.04■■□□□ 1.12
CLDND1-220ENST00000508902 PALD1Q9ULE6 856 aa22.04■■□□□ 1.12
CLDND1-220ENST00000508902 CSADQ9Y600 493 aa22.04■■□□□ 1.12
CLDND1-220ENST00000508902 TTC41PQ6P2S7 1318 aa22.04■■□□□ 1.12
CLDND1-220ENST00000508902 TESPA1A2RU30 521 aaPredicted RBP22.03■■□□□ 1.12
CLDND1-220ENST00000508902 MX1P20591 662 aa22.03■■□□□ 1.12
CLDND1-220ENST00000508902 JAG1P78504 1218 aa22.03■■□□□ 1.12
CLDND1-220ENST00000508902 CCDC84Q86UT8 332 aaPredicted RBP22.03■■□□□ 1.12
CLDND1-220ENST00000508902 BRI3BPQ8WY22 251 aa22.03■■□□□ 1.12
CLDND1-220ENST00000508902 LNPKQ9C0E8 428 aa22.03■■□□□ 1.12
CLDND1-220ENST00000508902 PRDM10Q9NQV6 1147 aa22.03■■□□□ 1.12
CLDND1-220ENST00000508902 SAGE1Q9NXZ1 904 aa22.03■■□□□ 1.12
CLDND1-220ENST00000508902 MAGEB6P1A0A0J9YX57 407 aa22.02■■□□□ 1.12
CLDND1-220ENST00000508902 IRF6O14896 467 aa22.02■■□□□ 1.12
CLDND1-220ENST00000508902 TBC1D12O60347 775 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms