RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 ITSN2Q9NZM3 1697 aa6.98□□□□□ -1.29
NUP54-206ENST00000508465 A6NHS1 94 aa6.98□□□□□ -1.29
NUP54-206ENST00000508465 KIF3BO15066 747 aa6.98□□□□□ -1.29
NUP54-206ENST00000508465 PHACTR2O75167 634 aa6.98□□□□□ -1.29
NUP54-206ENST00000508465 JAG1P78504 1218 aa6.98□□□□□ -1.29
NUP54-206ENST00000508465 GSTM4Q03013 218 aa6.98□□□□□ -1.29
NUP54-206ENST00000508465 FAM50AQ14320 339 aaKnown RBP6.98□□□□□ -1.29
NUP54-206ENST00000508465 ALKBH2Q6NS38 261 aa6.98□□□□□ -1.29
NUP54-206ENST00000508465 FLCNQ8NFG4 579 aa6.98□□□□□ -1.29
NUP54-206ENST00000508465 EZH1Q92800 747 aaPredicted RBP6.98□□□□□ -1.29
NUP54-206ENST00000508465 RRP7BPQ9NSQ0 103 aa6.98□□□□□ -1.29
NUP54-206ENST00000508465 PRKAG2Q9UGJ0 569 aa6.98□□□□□ -1.29
NUP54-206ENST00000508465 DIP2CQ9Y2E4 1556 aa6.98□□□□□ -1.29
NUP54-206ENST00000508465 SUPT6HQ7KZ85 1726 aaKnown RBP6.98□□□□□ -1.29
NUP54-206ENST00000508465 ABCA6Q8N139 1617 aa6.98□□□□□ -1.29
NUP54-206ENST00000508465 KIDINS220Q9ULH0 1771 aa6.97□□□□□ -1.29
NUP54-206ENST00000508465 DLGAP3O95886 979 aa6.97□□□□□ -1.29
NUP54-206ENST00000508465 C8AP07357 584 aa6.97□□□□□ -1.29
NUP54-206ENST00000508465 ESRRAP11474 423 aaPredicted RBP6.97□□□□□ -1.29
NUP54-206ENST00000508465 AAMPQ13685 434 aa6.97□□□□□ -1.29
NUP54-206ENST00000508465 MAP7Q14244 749 aa6.97□□□□□ -1.29
NUP54-206ENST00000508465 HP1BP3Q5SSJ5 553 aaPredicted RBP6.97□□□□□ -1.29
NUP54-206ENST00000508465 C2CD4AQ8NCU7 369 aaPredicted RBP6.97□□□□□ -1.29
NUP54-206ENST00000508465 BHLHE41Q9C0J9 482 aaPredicted RBP6.97□□□□□ -1.29
NUP54-206ENST00000508465 HECW2Q9P2P5 1572 aa6.97□□□□□ -1.29
NUP54-206ENST00000508465 CAMSAP2Q08AD1 1489 aa6.97□□□□□ -1.29
NUP54-206ENST00000508465 RIMS1Q86UR5 1692 aaKnown RBP6.96□□□□□ -1.29
NUP54-206ENST00000508465 MAP3K1Q13233 1512 aa6.96□□□□□ -1.29
NUP54-206ENST00000508465 MYOM3Q5VTT5 1437 aa6.96□□□□□ -1.3
NUP54-206ENST00000508465 EREGO14944 169 aa6.96□□□□□ -1.3
NUP54-206ENST00000508465 ITGB5P18084 799 aa6.96□□□□□ -1.3
NUP54-206ENST00000508465 ADMP35318 185 aa6.96□□□□□ -1.3
NUP54-206ENST00000508465 EIF1AXP47813 144 aaKnown RBP6.96□□□□□ -1.3
NUP54-206ENST00000508465 EHHADHQ08426 723 aa6.96□□□□□ -1.3
NUP54-206ENST00000508465 SHISA5Q8N114 240 aa6.96□□□□□ -1.3
NUP54-206ENST00000508465 SNX29Q8TEQ0 813 aa6.96□□□□□ -1.3
NUP54-206ENST00000508465 KRTAP4-7Q9BYR0 210 aa6.96□□□□□ -1.3
NUP54-206ENST00000508465 ZFYVE1Q9HBF4 777 aa6.96□□□□□ -1.3
NUP54-206ENST00000508465 A2MP01023 1474 aa6.96□□□□□ -1.3
NUP54-206ENST00000508465 DHX29Q7Z478 1369 aaKnown RBP6.95□□□□□ -1.3
NUP54-206ENST00000508465 FAM170BA6NMN3 283 aa6.95□□□□□ -1.3
NUP54-206ENST00000508465 TNFRSF21O75509 655 aa6.95□□□□□ -1.3
NUP54-206ENST00000508465 ITGAEP38570 1179 aa6.95□□□□□ -1.3
NUP54-206ENST00000508465 USP5P45974 858 aa6.95□□□□□ -1.3
NUP54-206ENST00000508465 ATP7AQ04656 1500 aa6.95□□□□□ -1.3
NUP54-206ENST00000508465 ZMYM3Q14202 1370 aa6.95□□□□□ -1.3
NUP54-206ENST00000508465 NFXL1Q6ZNB6 911 aa6.94□□□□□ -1.3
NUP54-206ENST00000508465 PBXIP1Q96AQ6 731 aa6.94□□□□□ -1.3
NUP54-206ENST00000508465 LRRC4CQ9HCJ2 640 aa6.94□□□□□ -1.3
NUP54-206ENST00000508465 PAK6Q9NQU5 681 aaPredicted RBP6.94□□□□□ -1.3
NUP54-206ENST00000508465 RAD18Q9NS91 495 aa6.94□□□□□ -1.3
NUP54-206ENST00000508465 POLIQ9UNA4 740 aa6.94□□□□□ -1.3
NUP54-206ENST00000508465 RTEL1-TNFRSF6BF6WH68 1400 aa6.93□□□□□ -1.3
NUP54-206ENST00000508465 CCDC141Q6ZP82 1450 aa6.93□□□□□ -1.3
NUP54-206ENST00000508465 BIN1O00499 593 aa6.93□□□□□ -1.3
NUP54-206ENST00000508465 CYP11A1P05108 521 aa6.93□□□□□ -1.3
NUP54-206ENST00000508465 NFICP08651 508 aa6.93□□□□□ -1.3
NUP54-206ENST00000508465 ADH5P11766 374 aa6.93□□□□□ -1.3
NUP54-206ENST00000508465 MPSTP25325 297 aa6.93□□□□□ -1.3
NUP54-206ENST00000508465 ZC3H7BQ9UGR2 993 aaKnown RBP6.93□□□□□ -1.3
NUP54-206ENST00000508465 AMOTL2Q9Y2J4 779 aa6.93□□□□□ -1.3
NUP54-206ENST00000508465 WASHC2CQ9Y4E1 1318 aa6.93□□□□□ -1.3
NUP54-206ENST00000508465 ABCC5O15440 1437 aa6.93□□□□□ -1.3
NUP54-206ENST00000508465 MIA2Q96PC5 1412 aa6.93□□□□□ -1.3
NUP54-206ENST00000508465 FER1L4A9Z1Z3 1794 aa6.92□□□□□ -1.3
NUP54-206ENST00000508465 AGLP35573 1532 aa6.92□□□□□ -1.3
NUP54-206ENST00000508465 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.92□□□□□ -1.3
NUP54-206ENST00000508465 RAB6AP20340 208 aa6.92□□□□□ -1.3
NUP54-206ENST00000508465 DYMQ7RTS9 669 aa6.92□□□□□ -1.3
NUP54-206ENST00000508465 DDX54Q8TDD1 881 aaKnown RBP6.92□□□□□ -1.3
NUP54-206ENST00000508465 SLAIN2Q9P270 581 aa6.92□□□□□ -1.3
NUP54-206ENST00000508465 SLC5A6Q9Y289 635 aa6.92□□□□□ -1.3
NUP54-206ENST00000508465 ACTL7BQ9Y614 415 aa6.92□□□□□ -1.3
NUP54-206ENST00000508465 FGD6Q6ZV73 1430 aa6.92□□□□□ -1.3
NUP54-206ENST00000508465 INO80Q9ULG1 1556 aaPredicted RBP6.91□□□□□ -1.3
NUP54-206ENST00000508465 MAOBP27338 520 aa6.91□□□□□ -1.3
NUP54-206ENST00000508465 COL19A1Q14993 1142 aa6.91□□□□□ -1.3
NUP54-206ENST00000508465 POU4F3Q15319 338 aa6.91□□□□□ -1.3
NUP54-206ENST00000508465 ZNF765Q7L2R6 523 aa6.91□□□□□ -1.3
NUP54-206ENST00000508465 STK11IPQ8N1F8 1099 aa6.91□□□□□ -1.3
NUP54-206ENST00000508465 GTF3C2Q8WUA4 911 aaPredicted RBP6.91□□□□□ -1.3
NUP54-206ENST00000508465 GATA6Q92908 595 aa6.91□□□□□ -1.3
NUP54-206ENST00000508465 LMTK3Q96Q04 1460 aa6.91□□□□□ -1.3
NUP54-206ENST00000508465 REREQ9P2R6 1566 aa6.91□□□□□ -1.3
NUP54-206ENST00000508465 ASPAP45381 313 aa6.9□□□□□ -1.3
NUP54-206ENST00000508465 AKAP4Q5JQC9 854 aa6.9□□□□□ -1.3
NUP54-206ENST00000508465 PEAR1Q5VY43 1037 aaPredicted RBP6.9□□□□□ -1.3
NUP54-206ENST00000508465 CLEC4MQ9H2X3 399 aaPredicted RBP6.9□□□□□ -1.3
NUP54-206ENST00000508465 SEMA6CQ9H3T2 930 aa6.9□□□□□ -1.3
NUP54-206ENST00000508465 FOXD3Q9UJU5 478 aaPredicted RBP6.9□□□□□ -1.3
NUP54-206ENST00000508465 ARHGEF5Q12774 1597 aa6.9□□□□□ -1.31
NUP54-206ENST00000508465 PTPN23Q9H3S7 1636 aa6.9□□□□□ -1.31
NUP54-206ENST00000508465 A0A096LPE4 126 aa6.89□□□□□ -1.31
NUP54-206ENST00000508465 A0A1W2PPZ6 126 aa6.89□□□□□ -1.31
NUP54-206ENST00000508465 FAM13AO94988 1023 aa6.89□□□□□ -1.31
NUP54-206ENST00000508465 PCDH1Q08174 1060 aa6.89□□□□□ -1.31
NUP54-206ENST00000508465 PLCL1Q15111 1095 aa6.89□□□□□ -1.31
NUP54-206ENST00000508465 OGFOD3Q6PK18 319 aa6.89□□□□□ -1.31
NUP54-206ENST00000508465 CORO1BQ9BR76 489 aa6.89□□□□□ -1.31
NUP54-206ENST00000508465 NRSN2Q9GZP1 204 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms