RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 HDAC1Q13547 482 aaPredicted RBP19.65■□□□□ 0.74
DNMT3A-215ENST00000496570 CNKSR2Q8WXI2 1034 aa19.65■□□□□ 0.74
DNMT3A-215ENST00000496570 SNCAIPQ9Y6H5 919 aa19.65■□□□□ 0.74
DNMT3A-215ENST00000496570 GOLIM4O00461 696 aa19.64■□□□□ 0.73
DNMT3A-215ENST00000496570 CYP7A1P22680 504 aa19.64■□□□□ 0.73
DNMT3A-215ENST00000496570 TM4SF4P48230 202 aa19.64■□□□□ 0.73
DNMT3A-215ENST00000496570 DYNLL1P63167 89 aaKnown RBP19.64■□□□□ 0.73
DNMT3A-215ENST00000496570 MAGEB6Q8N7X4 407 aa19.64■□□□□ 0.73
DNMT3A-215ENST00000496570 ZKSCAN4Q969J2 545 aaPredicted RBP19.64■□□□□ 0.73
DNMT3A-215ENST00000496570 HOOK2Q96ED9 719 aa19.64■□□□□ 0.73
DNMT3A-215ENST00000496570 DNAJC2Q99543 621 aaKnown RBP19.64■□□□□ 0.73
DNMT3A-215ENST00000496570 HAUS7Q99871 368 aa19.64■□□□□ 0.73
DNMT3A-215ENST00000496570 BOLA2Q9H3K6 86 aa19.64■□□□□ 0.73
DNMT3A-215ENST00000496570 ELP3Q9H9T3 547 aa19.64■□□□□ 0.73
DNMT3A-215ENST00000496570 RNF186Q9NXI6 227 aa19.64■□□□□ 0.73
DNMT3A-215ENST00000496570 COL2A1P02458 1487 aaPredicted RBP19.64■□□□□ 0.73
DNMT3A-215ENST00000496570 AK9Q5TCS8 1911 aa19.63■□□□□ 0.73
DNMT3A-215ENST00000496570 SIPA1L1O43166 1804 aa19.63■□□□□ 0.73
DNMT3A-215ENST00000496570 ZBTB48P10074 688 aaPredicted RBP19.63■□□□□ 0.73
DNMT3A-215ENST00000496570 INPP5BP32019 993 aa19.63■□□□□ 0.73
DNMT3A-215ENST00000496570 AAMPQ13685 434 aa19.63■□□□□ 0.73
DNMT3A-215ENST00000496570 TTF1Q15361 905 aaPredicted RBP19.63■□□□□ 0.73
DNMT3A-215ENST00000496570 DCAF15Q66K64 600 aa19.63■□□□□ 0.73
DNMT3A-215ENST00000496570 TEX11Q8IYF3 940 aa19.63■□□□□ 0.73
DNMT3A-215ENST00000496570 REM2Q8IYK8 340 aaPredicted RBP19.63■□□□□ 0.73
DNMT3A-215ENST00000496570 WRNIP1Q96S55 665 aa19.63■□□□□ 0.73
DNMT3A-215ENST00000496570 BEGAINQ9BUH8 593 aa19.63■□□□□ 0.73
DNMT3A-215ENST00000496570 ZNF341Q9BYN7 854 aa19.63■□□□□ 0.73
DNMT3A-215ENST00000496570 OSBPL5Q9H0X9 879 aaPredicted RBP19.63■□□□□ 0.73
DNMT3A-215ENST00000496570 PRDM10Q9NQV6 1147 aa19.63■□□□□ 0.73
DNMT3A-215ENST00000496570 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.63■□□□□ 0.73
DNMT3A-215ENST00000496570 TCRBV5S4A2TA0A5A2 114 aa19.62■□□□□ 0.73
DNMT3A-215ENST00000496570 PHF20L1A8MW92 1017 aa19.62■□□□□ 0.73
DNMT3A-215ENST00000496570 CA12O43570 354 aa19.62■□□□□ 0.73
DNMT3A-215ENST00000496570 MAP3K12Q12852 859 aa19.62■□□□□ 0.73
DNMT3A-215ENST00000496570 OTUD7AQ8TE49 926 aaPredicted RBP19.62■□□□□ 0.73
DNMT3A-215ENST00000496570 OPTNQ96CV9 577 aa19.62■□□□□ 0.73
DNMT3A-215ENST00000496570 PAG1Q9NWQ8 432 aa19.62■□□□□ 0.73
DNMT3A-215ENST00000496570 SALL3Q9BXA9 1300 aa19.61■□□□□ 0.73
DNMT3A-215ENST00000496570 BAG3O95817 575 aa19.61■□□□□ 0.73
DNMT3A-215ENST00000496570 PDE6AP16499 860 aa19.61■□□□□ 0.73
DNMT3A-215ENST00000496570 TSHZ3Q63HK5 1081 aa19.61■□□□□ 0.73
DNMT3A-215ENST00000496570 TMED8Q6PL24 325 aaPredicted RBP19.61■□□□□ 0.73
DNMT3A-215ENST00000496570 MIGA1Q8NAN2 632 aa19.61■□□□□ 0.73
DNMT3A-215ENST00000496570 RIOK1Q9BRS2 568 aaKnown RBP19.61■□□□□ 0.73
DNMT3A-215ENST00000496570 ECHDC1Q9NTX5 307 aa19.61■□□□□ 0.73
DNMT3A-215ENST00000496570 SAGE1Q9NXZ1 904 aa19.61■□□□□ 0.73
DNMT3A-215ENST00000496570 SPDYE5A6NIY4 337 aa19.6■□□□□ 0.73
DNMT3A-215ENST00000496570 TRPA1O75762 1119 aa19.6■□□□□ 0.73
DNMT3A-215ENST00000496570 CHGBP05060 677 aa19.6■□□□□ 0.73
DNMT3A-215ENST00000496570 PLCG2P16885 1265 aa19.6■□□□□ 0.73
DNMT3A-215ENST00000496570 SLFNL1Q499Z3 407 aa19.6■□□□□ 0.73
DNMT3A-215ENST00000496570 SLC9C2Q5TAH2 1124 aa19.6■□□□□ 0.73
DNMT3A-215ENST00000496570 MS4A4AQ96JQ5 239 aa19.6■□□□□ 0.73
DNMT3A-215ENST00000496570 FLT1P17948 1338 aa19.59■□□□□ 0.73
DNMT3A-215ENST00000496570 TESPA1A2RU30 521 aaPredicted RBP19.59■□□□□ 0.73
DNMT3A-215ENST00000496570 NOL9Q5SY16 702 aaKnown RBP19.59■□□□□ 0.73
DNMT3A-215ENST00000496570 TGFBRAP1Q8WUH2 860 aa19.59■□□□□ 0.73
DNMT3A-215ENST00000496570 NOL10Q9BSC4 688 aaKnown RBP19.59■□□□□ 0.73
DNMT3A-215ENST00000496570 CSADQ9Y600 493 aa19.59■□□□□ 0.73
DNMT3A-215ENST00000496570 ZNF532Q9HCE3 1301 aa19.58■□□□□ 0.73
DNMT3A-215ENST00000496570 MANSC4A6NHS7 340 aaPredicted RBP19.58■□□□□ 0.72
DNMT3A-215ENST00000496570 IGF2BP3O00425 579 aaKnown RBP eCLIP19.58■□□□□ 0.72
DNMT3A-215ENST00000496570 TBC1D12O60347 775 aa19.58■□□□□ 0.72
DNMT3A-215ENST00000496570 IGHDP01880 384 aa19.58■□□□□ 0.72
DNMT3A-215ENST00000496570 SREBF2Q12772 1141 aa19.58■□□□□ 0.72
DNMT3A-215ENST00000496570 MAPKAPK5Q8IW41 473 aa19.58■□□□□ 0.72
DNMT3A-215ENST00000496570 ZSCAN29Q8IWY8 852 aaPredicted RBP19.58■□□□□ 0.72
DNMT3A-215ENST00000496570 PTPN18Q99952 460 aa19.58■□□□□ 0.72
DNMT3A-215ENST00000496570 DDX60LQ5H9U9 1706 aaKnown RBP19.58■□□□□ 0.72
DNMT3A-215ENST00000496570 MYH7P12883 1935 aa19.57■□□□□ 0.72
DNMT3A-215ENST00000496570 FAM196BA6NMK8 535 aa19.57■□□□□ 0.72
DNMT3A-215ENST00000496570 ADD2P35612 726 aa19.57■□□□□ 0.72
DNMT3A-215ENST00000496570 ERO1BQ86YB8 467 aa19.57■□□□□ 0.72
DNMT3A-215ENST00000496570 PI4K2BQ8TCG2 481 aa19.57■□□□□ 0.72
DNMT3A-215ENST00000496570 GCC1Q96CN9 775 aa19.57■□□□□ 0.72
DNMT3A-215ENST00000496570 OTUD5Q96G74 571 aa19.57■□□□□ 0.72
DNMT3A-215ENST00000496570 RRP1BQ14684 758 aaKnown RBP19.56■□□□□ 0.72
DNMT3A-215ENST00000496570 IFNL1Q8IU54 200 aa19.56■□□□□ 0.72
DNMT3A-215ENST00000496570 SMC5Q8IY18 1101 aa19.56■□□□□ 0.72
DNMT3A-215ENST00000496570 R3HDMLQ9H3Y0 253 aa19.56■□□□□ 0.72
DNMT3A-215ENST00000496570 TTC41PQ6P2S7 1318 aa19.55■□□□□ 0.72
DNMT3A-215ENST00000496570 IRF6O14896 467 aa19.55■□□□□ 0.72
DNMT3A-215ENST00000496570 INHBEP58166 350 aa19.55■□□□□ 0.72
DNMT3A-215ENST00000496570 IRX6P78412 446 aaPredicted RBP19.55■□□□□ 0.72
DNMT3A-215ENST00000496570 PPIL2Q13356 520 aa19.55■□□□□ 0.72
DNMT3A-215ENST00000496570 DOCK1Q14185 1865 aa19.55■□□□□ 0.72
DNMT3A-215ENST00000496570 ANKRD45Q5TZF3 282 aa19.55■□□□□ 0.72
DNMT3A-215ENST00000496570 METTL16Q86W50 562 aaKnown RBP19.55■□□□□ 0.72
DNMT3A-215ENST00000496570 BRI3BPQ8WY22 251 aa19.55■□□□□ 0.72
DNMT3A-215ENST00000496570 CFHR5Q9BXR6 569 aa19.55■□□□□ 0.72
DNMT3A-215ENST00000496570 DNAJC18Q9H819 358 aa19.55■□□□□ 0.72
DNMT3A-215ENST00000496570 PALD1Q9ULE6 856 aa19.55■□□□□ 0.72
DNMT3A-215ENST00000496570 PHIPQ8WWQ0 1821 aa19.55■□□□□ 0.72
DNMT3A-215ENST00000496570 CASP8AP2Q9UKL3 1982 aa19.54■□□□□ 0.72
DNMT3A-215ENST00000496570 MAGEB6P1A0A0J9YX57 407 aa19.54■□□□□ 0.72
DNMT3A-215ENST00000496570 TBC1D8O95759 1140 aa19.54■□□□□ 0.72
DNMT3A-215ENST00000496570 PPATQ06203 517 aa19.54■□□□□ 0.72
DNMT3A-215ENST00000496570 CERS3Q8IU89 383 aa19.54■□□□□ 0.72
DNMT3A-215ENST00000496570 SCYL3Q8IZE3 742 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms