RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 RASAL3Q86YV0 1011 aa10.11□□□□□ -0.79
VPS13B-206ENST00000496144 ANKRD36CQ5JPF3 1778 aa10.11□□□□□ -0.79
VPS13B-206ENST00000496144 SPDYE2BA6NHP3 402 aa10.11□□□□□ -0.79
VPS13B-206ENST00000496144 IGKV5-2P06315 115 aa10.11□□□□□ -0.79
VPS13B-206ENST00000496144 SPDYE6P0CI01 402 aa10.11□□□□□ -0.79
VPS13B-206ENST00000496144 PTMSP20962 102 aa10.11□□□□□ -0.79
VPS13B-206ENST00000496144 CYP7A1P22680 504 aa10.11□□□□□ -0.79
VPS13B-206ENST00000496144 MCCP23508 829 aa10.11□□□□□ -0.79
VPS13B-206ENST00000496144 DACT2Q5SW24 774 aa10.11□□□□□ -0.79
VPS13B-206ENST00000496144 ARHGEF10LQ9HCE6 1279 aa10.11□□□□□ -0.79
VPS13B-206ENST00000496144 ARFGEF1Q9Y6D6 1849 aa10.11□□□□□ -0.79
VPS13B-206ENST00000496144 CSF1RP07333 972 aa10.11□□□□□ -0.79
VPS13B-206ENST00000496144 ANAPC15P60006 121 aa10.11□□□□□ -0.79
VPS13B-206ENST00000496144 HHIPL2Q6UWX4 724 aa10.11□□□□□ -0.79
VPS13B-206ENST00000496144 OPTNQ96CV9 577 aa10.11□□□□□ -0.79
VPS13B-206ENST00000496144 KAZALD1Q96I82 304 aa10.11□□□□□ -0.79
VPS13B-206ENST00000496144 WNT10BO00744 389 aa10.1□□□□□ -0.79
VPS13B-206ENST00000496144 TRMT44Q8IYL2 757 aaKnown RBP10.1□□□□□ -0.79
VPS13B-206ENST00000496144 DHX36Q9H2U1 1008 aaKnown RBP10.1□□□□□ -0.79
VPS13B-206ENST00000496144 TBC1D8O95759 1140 aa10.1□□□□□ -0.79
VPS13B-206ENST00000496144 NBPF9Q3BBW0 867 aa10.1□□□□□ -0.79
VPS13B-206ENST00000496144 TMED8Q6PL24 325 aaPredicted RBP10.1□□□□□ -0.79
VPS13B-206ENST00000496144 CLEC17AQ6ZS10 378 aa10.1□□□□□ -0.79
VPS13B-206ENST00000496144 C15orf52Q6ZUT6 534 aaKnown RBP10.1□□□□□ -0.79
VPS13B-206ENST00000496144 TNPO2O14787 897 aaKnown RBP10.1□□□□□ -0.79
VPS13B-206ENST00000496144 IGSF3O75054 1194 aa10.1□□□□□ -0.79
VPS13B-206ENST00000496144 ITGBL1O95965 494 aaPredicted RBP10.1□□□□□ -0.79
VPS13B-206ENST00000496144 BTDP43251 543 aa10.1□□□□□ -0.79
VPS13B-206ENST00000496144 FOXD4L1Q9NU39 408 aa10.1□□□□□ -0.79
VPS13B-206ENST00000496144 TFRCP02786 760 aaKnown RBP10.09□□□□□ -0.79
VPS13B-206ENST00000496144 SPRYD7Q5W111 196 aa10.09□□□□□ -0.79
VPS13B-206ENST00000496144 FBXO46Q6PJ61 603 aaPredicted RBP10.09□□□□□ -0.79
VPS13B-206ENST00000496144 YDJCA8MPS7 323 aa10.09□□□□□ -0.79
VPS13B-206ENST00000496144 B4DLN1 442 aa10.09□□□□□ -0.79
VPS13B-206ENST00000496144 IL1R1P14778 569 aa10.09□□□□□ -0.79
VPS13B-206ENST00000496144 MRPL12P52815 198 aaKnown RBP10.09□□□□□ -0.79
VPS13B-206ENST00000496144 GBP4Q96PP9 640 aa10.09□□□□□ -0.79
VPS13B-206ENST00000496144 HSP90AA1P07900 732 aaKnown RBP10.09□□□□□ -0.79
VPS13B-206ENST00000496144 SPDYE2Q495Y8 402 aa10.09□□□□□ -0.79
VPS13B-206ENST00000496144 PRAMEF18Q5VWM3 479 aa10.09□□□□□ -0.79
VPS13B-206ENST00000496144 IL27Q8NEV9 243 aa10.09□□□□□ -0.79
VPS13B-206ENST00000496144 WDR90Q96KV7 1748 aa10.09□□□□□ -0.79
VPS13B-206ENST00000496144 GPR25O00155 361 aa10.09□□□□□ -0.79
VPS13B-206ENST00000496144 PTPN12Q05209 780 aaKnown RBP10.09□□□□□ -0.79
VPS13B-206ENST00000496144 FAM151AQ8WW52 585 aa10.09□□□□□ -0.79
VPS13B-206ENST00000496144 MFSD14CQ5VZR4 134 aa10.08□□□□□ -0.8
VPS13B-206ENST00000496144 IL25Q9H293 177 aa10.08□□□□□ -0.8
VPS13B-206ENST00000496144 GINM1Q9NU53 330 aa10.08□□□□□ -0.8
VPS13B-206ENST00000496144 TIAM2Q8IVF5 1701 aa10.08□□□□□ -0.8
VPS13B-206ENST00000496144 CCDC174Q6PII3 467 aa10.08□□□□□ -0.8
VPS13B-206ENST00000496144 SPATA5Q8NB90 893 aa10.08□□□□□ -0.8
VPS13B-206ENST00000496144 PA2G4Q9UQ80 394 aaKnown RBP10.08□□□□□ -0.8
VPS13B-206ENST00000496144 XAGE2Q96GT9 111 aa10.08□□□□□ -0.8
VPS13B-206ENST00000496144 SPC25Q9HBM1 224 aa10.08□□□□□ -0.8
VPS13B-206ENST00000496144 MAGEB6P1A0A0J9YX57 407 aa10.08□□□□□ -0.8
VPS13B-206ENST00000496144 ENTPD3O75355 529 aa10.08□□□□□ -0.8
VPS13B-206ENST00000496144 PPIL2Q13356 520 aa10.08□□□□□ -0.8
VPS13B-206ENST00000496144 VTI1AQ96AJ9 217 aa10.08□□□□□ -0.8
VPS13B-206ENST00000496144 LBHD1Q9BQE6 289 aaPredicted RBP10.08□□□□□ -0.8
VPS13B-206ENST00000496144 LSG1Q9H089 658 aaKnown RBP10.08□□□□□ -0.8
VPS13B-206ENST00000496144 MKNK2Q9HBH9 465 aa10.08□□□□□ -0.8
VPS13B-206ENST00000496144 CYP2E1P05181 493 aaPredicted RBP10.08□□□□□ -0.8
VPS13B-206ENST00000496144 HSPA4P34932 840 aa10.08□□□□□ -0.8
VPS13B-206ENST00000496144 SOX10P56693 466 aa10.08□□□□□ -0.8
VPS13B-206ENST00000496144 COL13A1Q5TAT6 717 aaPredicted RBP10.08□□□□□ -0.8
VPS13B-206ENST00000496144 PALD1Q9ULE6 856 aa10.08□□□□□ -0.8
VPS13B-206ENST00000496144 MYCP01106 439 aaPredicted RBP10.07□□□□□ -0.8
VPS13B-206ENST00000496144 FAM83AQ86UY5 434 aa10.07□□□□□ -0.8
VPS13B-206ENST00000496144 TDRD7Q8NHU6 1098 aaKnown RBP10.07□□□□□ -0.8
VPS13B-206ENST00000496144 TRAK2O60296 914 aa10.07□□□□□ -0.8
VPS13B-206ENST00000496144 MTMR14Q8NCE2 650 aa10.07□□□□□ -0.8
VPS13B-206ENST00000496144 SGSM2O43147 1006 aa10.07□□□□□ -0.8
VPS13B-206ENST00000496144 MCM2P49736 904 aa10.07□□□□□ -0.8
VPS13B-206ENST00000496144 TFCP2Q12800 502 aa10.07□□□□□ -0.8
VPS13B-206ENST00000496144 PLS1Q14651 629 aa10.07□□□□□ -0.8
VPS13B-206ENST00000496144 FKBP1CQ5VVH2 108 aa10.07□□□□□ -0.8
VPS13B-206ENST00000496144 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.07□□□□□ -0.8
VPS13B-206ENST00000496144 RAD50Q92878 1312 aa10.07□□□□□ -0.8
VPS13B-206ENST00000496144 A0A1B0GUL7 405 aa10.07□□□□□ -0.8
VPS13B-206ENST00000496144 USP17L5A8MUK1 530 aa10.07□□□□□ -0.8
VPS13B-206ENST00000496144 ZNF444Q8N0Y2 327 aaPredicted RBP10.07□□□□□ -0.8
VPS13B-206ENST00000496144 ANO2Q9NQ90 1003 aa10.07□□□□□ -0.8
VPS13B-206ENST00000496144 ZHX2Q9Y6X8 837 aa10.07□□□□□ -0.8
VPS13B-206ENST00000496144 SCN4AP35499 1836 aa10.07□□□□□ -0.8
VPS13B-206ENST00000496144 MIGA2Q7L4E1 593 aa10.06□□□□□ -0.8
VPS13B-206ENST00000496144 MXD3Q9BW11 206 aa10.06□□□□□ -0.8
VPS13B-206ENST00000496144 PPATQ06203 517 aa10.06□□□□□ -0.8
VPS13B-206ENST00000496144 GOPCQ9HD26 462 aa10.06□□□□□ -0.8
VPS13B-206ENST00000496144 RBM27Q9P2N5 1060 aaKnown RBP10.06□□□□□ -0.8
VPS13B-206ENST00000496144 FAM205AQ6ZU69 1335 aa10.06□□□□□ -0.8
VPS13B-206ENST00000496144 SPEF2Q9C093 1822 aa10.06□□□□□ -0.8
VPS13B-206ENST00000496144 CXCL11O14625 94 aa10.06□□□□□ -0.8
VPS13B-206ENST00000496144 TDO2P48775 406 aa10.06□□□□□ -0.8
VPS13B-206ENST00000496144 FOXO4P98177 505 aa10.06□□□□□ -0.8
VPS13B-206ENST00000496144 ECHDC1Q9NTX5 307 aa10.06□□□□□ -0.8
VPS13B-206ENST00000496144 GCLCP48506 637 aaPredicted RBP10.06□□□□□ -0.8
VPS13B-206ENST00000496144 RABL6Q3YEC7 729 aaPredicted RBP10.06□□□□□ -0.8
VPS13B-206ENST00000496144 PGAP2Q9UHJ9 254 aa10.06□□□□□ -0.8
VPS13B-206ENST00000496144 RFX5P48382 616 aaPredicted RBP10.05□□□□□ -0.8
VPS13B-206ENST00000496144 CASP7P55210 303 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms