RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 SLC4A10Q6U841 1118 aa11□□□□□ -0.65
VPS8-225ENST00000492449 UBE3BQ7Z3V4 1068 aa11□□□□□ -0.65
VPS8-225ENST00000492449 RIN2Q8WYP3 895 aaPredicted RBP11□□□□□ -0.65
VPS8-225ENST00000492449 RPGRIP1Q96KN7 1286 aa11□□□□□ -0.65
VPS8-225ENST00000492449 PSMD1Q99460 953 aa11□□□□□ -0.65
VPS8-225ENST00000492449 PAIP2Q9BPZ3 127 aaKnown RBP11□□□□□ -0.65
VPS8-225ENST00000492449 EHD4Q9H223 541 aa11□□□□□ -0.65
VPS8-225ENST00000492449 C19orf44Q9H6X5 657 aa11□□□□□ -0.65
VPS8-225ENST00000492449 FANCLQ9NW38 375 aa11□□□□□ -0.65
VPS8-225ENST00000492449 FBXO3Q9UK99 471 aa11□□□□□ -0.65
VPS8-225ENST00000492449 SAMM50Q9Y512 469 aa11□□□□□ -0.65
VPS8-225ENST00000492449 RPS6KL1Q9Y6S9 549 aa11□□□□□ -0.65
VPS8-225ENST00000492449 NBPF7P0C2Y1 421 aaPredicted RBP10.99□□□□□ -0.65
VPS8-225ENST00000492449 COL9A3Q14050 684 aaPredicted RBP10.99□□□□□ -0.65
VPS8-225ENST00000492449 SKIDA1Q1XH10 827 aa10.99□□□□□ -0.65
VPS8-225ENST00000492449 ZNF569Q5MCW4 686 aa10.99□□□□□ -0.65
VPS8-225ENST00000492449 TMEM132EQ6IEE7 984 aa10.99□□□□□ -0.65
VPS8-225ENST00000492449 G2E3Q7L622 706 aa10.99□□□□□ -0.65
VPS8-225ENST00000492449 ILDR1Q86SU0 546 aaPredicted RBP10.99□□□□□ -0.65
VPS8-225ENST00000492449 DRAXINQ8NBI3 349 aaPredicted RBP10.99□□□□□ -0.65
VPS8-225ENST00000492449 FMNL2Q96PY5 1086 aa10.99□□□□□ -0.65
VPS8-225ENST00000492449 DESI2Q9BSY9 194 aa10.99□□□□□ -0.65
VPS8-225ENST00000492449 CPSF2Q9P2I0 782 aaKnown RBP10.99□□□□□ -0.65
VPS8-225ENST00000492449 KDRP35968 1356 aa10.99□□□□□ -0.65
VPS8-225ENST00000492449 A0A1B0GVL5 298 aa10.99□□□□□ -0.65
VPS8-225ENST00000492449 ATP5JP18859 108 aa10.99□□□□□ -0.65
VPS8-225ENST00000492449 C6orf89Q6UWU4 347 aa10.99□□□□□ -0.65
VPS8-225ENST00000492449 KCNG4Q8TDN1 519 aa10.99□□□□□ -0.65
VPS8-225ENST00000492449 SAAL1Q96ER3 474 aa10.99□□□□□ -0.65
VPS8-225ENST00000492449 KIF9Q9HAQ2 790 aa10.99□□□□□ -0.65
VPS8-225ENST00000492449 TTF2Q9UNY4 1162 aaKnown RBP10.99□□□□□ -0.65
VPS8-225ENST00000492449 GOLGA6BA6NDN3 693 aa10.98□□□□□ -0.65
VPS8-225ENST00000492449 PES1O00541 588 aaKnown RBP10.98□□□□□ -0.65
VPS8-225ENST00000492449 YEATS4O95619 227 aa10.98□□□□□ -0.65
VPS8-225ENST00000492449 HSP90AB2PQ58FF8 381 aa10.98□□□□□ -0.65
VPS8-225ENST00000492449 CYB5D1Q6P9G0 228 aa10.98□□□□□ -0.65
VPS8-225ENST00000492449 LINC00301Q8NCQ3 95 aa10.98□□□□□ -0.65
VPS8-225ENST00000492449 EVI5LQ96CN4 794 aa10.98□□□□□ -0.65
VPS8-225ENST00000492449 MYO6Q9UM54 1294 aa10.98□□□□□ -0.65
VPS8-225ENST00000492449 MED23Q9ULK4 1368 aa10.98□□□□□ -0.65
VPS8-225ENST00000492449 PTPRMP28827 1452 aa10.98□□□□□ -0.65
VPS8-225ENST00000492449 MED1Q15648 1581 aaPredicted RBP10.98□□□□□ -0.65
VPS8-225ENST00000492449 GOLGA6L7A0A1B0GV03 622 aa10.98□□□□□ -0.65
VPS8-225ENST00000492449 RAB27AP51159 221 aa10.98□□□□□ -0.65
VPS8-225ENST00000492449 ATP2B2Q01814 1243 aa10.98□□□□□ -0.65
VPS8-225ENST00000492449 KRT32Q14532 448 aa10.98□□□□□ -0.65
VPS8-225ENST00000492449 HDGFL2Q7Z4V5 671 aaPredicted RBP10.98□□□□□ -0.65
VPS8-225ENST00000492449 FUKQ8N0W3 1084 aa10.98□□□□□ -0.65
VPS8-225ENST00000492449 SLC35F6Q8N357 371 aa10.98□□□□□ -0.65
VPS8-225ENST00000492449 AFAP1Q8N556 730 aa10.98□□□□□ -0.65
VPS8-225ENST00000492449 RSRC1Q96IZ7 334 aaKnown RBP10.98□□□□□ -0.65
VPS8-225ENST00000492449 SELENOOQ9BVL4 669 aa10.98□□□□□ -0.65
VPS8-225ENST00000492449 SALL1Q9NSC2 1324 aa10.98□□□□□ -0.65
VPS8-225ENST00000492449 RGPD1P0DJD0 1748 aa10.98□□□□□ -0.65
VPS8-225ENST00000492449 OPA1O60313 960 aa10.98□□□□□ -0.65
VPS8-225ENST00000492449 ADKP55263 362 aaKnown RBP10.98□□□□□ -0.65
VPS8-225ENST00000492449 STK3Q13188 491 aa10.98□□□□□ -0.65
VPS8-225ENST00000492449 AENQ8WTP8 325 aaKnown RBP10.98□□□□□ -0.65
VPS8-225ENST00000492449 EPN3Q9H201 632 aa10.98□□□□□ -0.65
VPS8-225ENST00000492449 LZTFL1Q9NQ48 299 aa10.98□□□□□ -0.65
VPS8-225ENST00000492449 LIN7AO14910 233 aaPredicted RBP10.97□□□□□ -0.65
VPS8-225ENST00000492449 ECM2O94769 699 aaPredicted RBP10.97□□□□□ -0.65
VPS8-225ENST00000492449 ZNF18P17022 549 aa10.97□□□□□ -0.65
VPS8-225ENST00000492449 SLMAPQ14BN4 828 aa10.97□□□□□ -0.65
VPS8-225ENST00000492449 NAA25Q14CX7 972 aa10.97□□□□□ -0.65
VPS8-225ENST00000492449 HSP90AB4PQ58FF6 505 aa10.97□□□□□ -0.65
VPS8-225ENST00000492449 USPL1Q5W0Q7 1092 aa10.97□□□□□ -0.65
VPS8-225ENST00000492449 RAD9BQ6WBX8 426 aa10.97□□□□□ -0.65
VPS8-225ENST00000492449 CCNI2Q6ZMN8 369 aaPredicted RBP10.97□□□□□ -0.65
VPS8-225ENST00000492449 KLHL23Q8NBE8 558 aa10.97□□□□□ -0.65
VPS8-225ENST00000492449 NSUN7Q8NE18 718 aaKnown RBP10.97□□□□□ -0.65
VPS8-225ENST00000492449 DDX54Q8TDD1 881 aaKnown RBP10.97□□□□□ -0.65
VPS8-225ENST00000492449 LMBR1Q8WVP7 490 aa10.97□□□□□ -0.65
VPS8-225ENST00000492449 TMX4Q9H1E5 349 aaPredicted RBP10.97□□□□□ -0.65
VPS8-225ENST00000492449 POLR3EQ9NVU0 708 aa10.97□□□□□ -0.65
VPS8-225ENST00000492449 DLC1Q96QB1 1528 aa10.97□□□□□ -0.65
VPS8-225ENST00000492449 AKR1B15C9JRZ8 316 aaPredicted RBP10.97□□□□□ -0.65
VPS8-225ENST00000492449 BIN1O00499 593 aa10.97□□□□□ -0.65
VPS8-225ENST00000492449 MTF1Q14872 753 aa10.97□□□□□ -0.65
VPS8-225ENST00000492449 NBPF14Q5TI25 921 aa10.97□□□□□ -0.65
VPS8-225ENST00000492449 NAA35Q5VZE5 725 aa10.97□□□□□ -0.65
VPS8-225ENST00000492449 TRAPPC11Q7Z392 1133 aa10.97□□□□□ -0.65
VPS8-225ENST00000492449 C3orf20Q8ND61 904 aa10.97□□□□□ -0.65
VPS8-225ENST00000492449 EBF2Q9HAK2 575 aa10.97□□□□□ -0.65
VPS8-225ENST00000492449 TPX2Q9ULW0 747 aaKnown RBP10.97□□□□□ -0.65
VPS8-225ENST00000492449 ANKARQ7Z5J8 1434 aa10.97□□□□□ -0.65
VPS8-225ENST00000492449 LRRC37A3O60309 1634 aa10.97□□□□□ -0.65
VPS8-225ENST00000492449 SETD1BQ9UPS6 1966 aaKnown RBP10.96□□□□□ -0.65
VPS8-225ENST00000492449 NUTM2FA1L443 756 aa10.96□□□□□ -0.65
VPS8-225ENST00000492449 SOWAHDA6NJG2 315 aa10.96□□□□□ -0.65
VPS8-225ENST00000492449 MGRN1O60291 552 aa10.96□□□□□ -0.65
VPS8-225ENST00000492449 AP1G2O75843 785 aa10.96□□□□□ -0.65
VPS8-225ENST00000492449 PDHBP11177 359 aa10.96□□□□□ -0.65
VPS8-225ENST00000492449 CMA1P23946 247 aa10.96□□□□□ -0.65
VPS8-225ENST00000492449 TBC1D25Q3MII6 688 aa10.96□□□□□ -0.65
VPS8-225ENST00000492449 NUTM2GQ5VZR2 741 aa10.96□□□□□ -0.65
VPS8-225ENST00000492449 PARD3BQ8TEW8 1205 aa10.96□□□□□ -0.65
VPS8-225ENST00000492449 CAND2O75155 1236 aa10.96□□□□□ -0.66
VPS8-225ENST00000492449 ALDH1L1O75891 902 aa10.96□□□□□ -0.66
VPS8-225ENST00000492449 FESP07332 822 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms