RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 MYCP01106 439 aaPredicted RBP10.32□□□□□ -0.76
USP39-216ENST00000490193 NBPF7P0C2Y1 421 aaPredicted RBP10.32□□□□□ -0.76
USP39-216ENST00000490193 FGFR2P21802 821 aa10.32□□□□□ -0.76
USP39-216ENST00000490193 OSBPP22059 807 aa10.32□□□□□ -0.76
USP39-216ENST00000490193 GRK4P32298 578 aa10.32□□□□□ -0.76
USP39-216ENST00000490193 PSMC4P43686 418 aa10.32□□□□□ -0.76
USP39-216ENST00000490193 MOGSQ13724 837 aa10.32□□□□□ -0.76
USP39-216ENST00000490193 LRRC24Q50LG9 513 aa10.32□□□□□ -0.76
USP39-216ENST00000490193 NOL9Q5SY16 702 aaKnown RBP10.32□□□□□ -0.76
USP39-216ENST00000490193 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.32□□□□□ -0.76
USP39-216ENST00000490193 SLC17A8Q8NDX2 589 aa10.32□□□□□ -0.76
USP39-216ENST00000490193 FAM151AQ8WW52 585 aa10.32□□□□□ -0.76
USP39-216ENST00000490193 CPA4Q9UI42 421 aa10.32□□□□□ -0.76
USP39-216ENST00000490193 AK9Q5TCS8 1911 aa10.32□□□□□ -0.76
USP39-216ENST00000490193 PDHXO00330 501 aa10.31□□□□□ -0.76
USP39-216ENST00000490193 FRAT2O75474 233 aaPredicted RBP10.31□□□□□ -0.76
USP39-216ENST00000490193 BCRP11274 1271 aa10.31□□□□□ -0.76
USP39-216ENST00000490193 CAPN2P17655 700 aa10.31□□□□□ -0.76
USP39-216ENST00000490193 INPP5BP32019 993 aa10.31□□□□□ -0.76
USP39-216ENST00000490193 BCAMP50895 628 aa10.31□□□□□ -0.76
USP39-216ENST00000490193 METTL24Q5JXM2 366 aa10.31□□□□□ -0.76
USP39-216ENST00000490193 SLC4A10Q6U841 1118 aa10.31□□□□□ -0.76
USP39-216ENST00000490193 ANKRD44Q8N8A2 993 aa10.31□□□□□ -0.76
USP39-216ENST00000490193 RAET1EQ8TD07 263 aa10.31□□□□□ -0.76
USP39-216ENST00000490193 HTATIP2Q9BUP3 242 aa10.31□□□□□ -0.76
USP39-216ENST00000490193 BICC1Q9H694 974 aaKnown RBP10.31□□□□□ -0.76
USP39-216ENST00000490193 RBM27Q9P2N5 1060 aaKnown RBP10.31□□□□□ -0.76
USP39-216ENST00000490193 MYPNQ86TC9 1320 aa10.31□□□□□ -0.76
USP39-216ENST00000490193 PHIPQ8WWQ0 1821 aa10.3□□□□□ -0.76
USP39-216ENST00000490193 A0A1W2PPC1 479 aa10.3□□□□□ -0.76
USP39-216ENST00000490193 CXCL11O14625 94 aa10.3□□□□□ -0.76
USP39-216ENST00000490193 CCL5P13501 91 aa10.3□□□□□ -0.76
USP39-216ENST00000490193 PUM3Q15397 648 aaKnown RBP10.3□□□□□ -0.76
USP39-216ENST00000490193 MIGA2Q7L4E1 593 aa10.3□□□□□ -0.76
USP39-216ENST00000490193 WDR66Q8TBY9 1149 aa10.3□□□□□ -0.76
USP39-216ENST00000490193 DPF3Q92784 378 aa10.3□□□□□ -0.76
USP39-216ENST00000490193 DOCK1Q14185 1865 aa10.3□□□□□ -0.76
USP39-216ENST00000490193 ATRNL1Q5VV63 1379 aa10.29□□□□□ -0.76
USP39-216ENST00000490193 ALPK3Q96L96 1907 aa10.29□□□□□ -0.76
USP39-216ENST00000490193 FMNL1O95466 1100 aaPredicted RBP10.29□□□□□ -0.76
USP39-216ENST00000490193 IFIT1P09914 478 aaKnown RBP10.29□□□□□ -0.76
USP39-216ENST00000490193 FCGRTP55899 365 aa10.29□□□□□ -0.76
USP39-216ENST00000490193 UBXN2AP68543 259 aa10.29□□□□□ -0.76
USP39-216ENST00000490193 GPAT2Q6NUI2 795 aa10.29□□□□□ -0.76
USP39-216ENST00000490193 PARK7Q99497 189 aaKnown RBP10.29□□□□□ -0.76
USP39-216ENST00000490193 DAGLAQ9Y4D2 1042 aa10.29□□□□□ -0.76
USP39-216ENST00000490193 NR2E3Q9Y5X4 410 aa10.29□□□□□ -0.76
USP39-216ENST00000490193 LAMA3Q16787 3333 aa10.29□□□□□ -0.76
USP39-216ENST00000490193 ZBTB7BO15156 539 aaPredicted RBP10.28□□□□□ -0.76
USP39-216ENST00000490193 PRKCZQ05513 592 aa10.28□□□□□ -0.76
USP39-216ENST00000490193 CDC42EP5Q6NZY7 148 aa10.28□□□□□ -0.76
USP39-216ENST00000490193 U2AF1L4Q8WU68 220 aaKnown RBP10.28□□□□□ -0.76
USP39-216ENST00000490193 LPIN2Q92539 896 aa10.28□□□□□ -0.76
USP39-216ENST00000490193 RNF208Q9H0X6 261 aa10.28□□□□□ -0.76
USP39-216ENST00000490193 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.28□□□□□ -0.76
USP39-216ENST00000490193 FAM198AQ9UFP1 575 aa10.28□□□□□ -0.76
USP39-216ENST00000490193 SLC45A1Q9Y2W3 748 aa10.28□□□□□ -0.76
USP39-216ENST00000490193 MYH2Q9UKX2 1941 aa10.28□□□□□ -0.76
USP39-216ENST00000490193 A0A0C4DFX4 3053 aa10.27□□□□□ -0.76
USP39-216ENST00000490193 RFX7Q2KHR2 1363 aa10.27□□□□□ -0.76
USP39-216ENST00000490193 A0A0G2JLL6 359 aaPredicted RBP10.27□□□□□ -0.77
USP39-216ENST00000490193 PHF20L1A8MW92 1017 aa10.27□□□□□ -0.77
USP39-216ENST00000490193 FARP2O94887 1054 aaPredicted RBP10.27□□□□□ -0.77
USP39-216ENST00000490193 SGPL1O95470 568 aa10.27□□□□□ -0.77
USP39-216ENST00000490193 SLC5A1P13866 664 aa10.27□□□□□ -0.77
USP39-216ENST00000490193 NFIAQ12857 509 aa10.27□□□□□ -0.77
USP39-216ENST00000490193 IRF5Q13568 498 aa10.27□□□□□ -0.77
USP39-216ENST00000490193 FASTKD5Q7L8L6 764 aaKnown RBP10.27□□□□□ -0.77
USP39-216ENST00000490193 PRRT2Q7Z6L0 340 aaPredicted RBP10.27□□□□□ -0.77
USP39-216ENST00000490193 KLHDC4Q8TBB5 520 aa10.27□□□□□ -0.77
USP39-216ENST00000490193 PXYLP1Q8TE99 480 aa10.27□□□□□ -0.77
USP39-216ENST00000490193 GABRQQ9UN88 632 aa10.27□□□□□ -0.77
USP39-216ENST00000490193 PTPRCP08575 1304 aa10.27□□□□□ -0.77
USP39-216ENST00000490193 SALL1Q9NSC2 1324 aa10.27□□□□□ -0.77
USP39-216ENST00000490193 LOC285556D6RIA3 1793 aa10.26□□□□□ -0.77
USP39-216ENST00000490193 DOCK3Q8IZD9 2030 aa10.26□□□□□ -0.77
USP39-216ENST00000490193 EYA2O00167 538 aa10.26□□□□□ -0.77
USP39-216ENST00000490193 ECM2O94769 699 aaPredicted RBP10.26□□□□□ -0.77
USP39-216ENST00000490193 CYP2C8P10632 490 aa10.26□□□□□ -0.77
USP39-216ENST00000490193 PRDX5P30044 214 aa10.26□□□□□ -0.77
USP39-216ENST00000490193 RFX5P48382 616 aaPredicted RBP10.26□□□□□ -0.77
USP39-216ENST00000490193 MAP3K10Q02779 954 aa10.26□□□□□ -0.77
USP39-216ENST00000490193 TCP10Q12799 353 aa10.26□□□□□ -0.77
USP39-216ENST00000490193 DIXDC1Q155Q3 683 aa10.26□□□□□ -0.77
USP39-216ENST00000490193 SCYL3Q8IZE3 742 aa10.26□□□□□ -0.77
USP39-216ENST00000490193 IDI2Q9BXS1 227 aa10.26□□□□□ -0.77
USP39-216ENST00000490193 USP44Q9H0E7 712 aa10.26□□□□□ -0.77
USP39-216ENST00000490193 UNC93B1Q9H1C4 597 aa10.26□□□□□ -0.77
USP39-216ENST00000490193 MRS2Q9HD23 443 aa10.26□□□□□ -0.77
USP39-216ENST00000490193 BIN2Q9UBW5 565 aaPredicted RBP10.26□□□□□ -0.77
USP39-216ENST00000490193 SALL2Q9Y467 1007 aaPredicted RBP10.26□□□□□ -0.77
USP39-216ENST00000490193 SEMA3EO15041 775 aa10.25□□□□□ -0.77
USP39-216ENST00000490193 ADCY3O60266 1144 aa10.25□□□□□ -0.77
USP39-216ENST00000490193 ENTPD3O75355 529 aa10.25□□□□□ -0.77
USP39-216ENST00000490193 PTPRAP18433 802 aa10.25□□□□□ -0.77
USP39-216ENST00000490193 ATG9AQ7Z3C6 839 aa10.25□□□□□ -0.77
USP39-216ENST00000490193 MRPL50Q8N5N7 158 aaKnown RBP10.25□□□□□ -0.77
USP39-216ENST00000490193 CRISPLD2Q9H0B8 497 aa10.25□□□□□ -0.77
USP39-216ENST00000490193 PAK6Q9NQU5 681 aaPredicted RBP10.25□□□□□ -0.77
USP39-216ENST00000490193 FBXO3Q9UK99 471 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms