RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 XDHP47989 1333 aa6.93□□□□□ -1.3
COPS3-208ENST00000486032 MSTNO14793 375 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 PPIP5K2O43314 1243 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 GRIN3BO60391 1043 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 RAB11FIP3O75154 756 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 PDE8BO95263 885 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 IFIT1P09914 478 aaKnown RBP6.92□□□□□ -1.3
COPS3-208ENST00000486032 SLC5A1P13866 664 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 KLRK1P26718 216 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 FKBP4Q02790 459 aaKnown RBP eCLIP6.92□□□□□ -1.3
COPS3-208ENST00000486032 HDAC1Q13547 482 aaPredicted RBP6.92□□□□□ -1.3
COPS3-208ENST00000486032 ATP2B3Q16720 1220 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 AOC3Q16853 763 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 WASHC4Q2M389 1173 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 GORABQ5T7V8 394 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 SOGA3Q5TF21 947 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 CC2D2BQ6DHV5 1058 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 MRPL14Q6P1L8 145 aaKnown RBP6.92□□□□□ -1.3
COPS3-208ENST00000486032 ERC1Q8IUD2 1116 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 RTKN2Q8IZC4 609 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 SUPT20HQ8NEM7 779 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 TBC1D16Q8TBP0 767 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 KIF1BPQ96EK5 621 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 EYA3Q99504 573 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 LRRCC1Q9C099 1032 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 ZC3H12CQ9C0D7 883 aaKnown RBP6.92□□□□□ -1.3
COPS3-208ENST00000486032 TAOK3Q9H2K8 898 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 DCTPP1Q9H773 170 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 NMRK2Q9NPI5 230 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 POLLQ9UGP5 575 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 NOP58Q9Y2X3 529 aaKnown RBP6.92□□□□□ -1.3
COPS3-208ENST00000486032 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.92□□□□□ -1.3
COPS3-208ENST00000486032 ZNF804BA4D1E1 1349 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 ZNF541Q9H0D2 1346 aa6.92□□□□□ -1.3
COPS3-208ENST00000486032 DICER1Q9UPY3 1922 aaKnown RBP6.91□□□□□ -1.3
COPS3-208ENST00000486032 A0A1B0GUL7 405 aa6.91□□□□□ -1.3
COPS3-208ENST00000486032 SIAH2O43255 324 aa6.91□□□□□ -1.3
COPS3-208ENST00000486032 PPFIA3O75145 1194 aa6.91□□□□□ -1.3
COPS3-208ENST00000486032 FRAT2O75474 233 aaPredicted RBP6.91□□□□□ -1.3
COPS3-208ENST00000486032 IFIT2P09913 472 aaKnown RBP6.91□□□□□ -1.3
COPS3-208ENST00000486032 ADORA1P30542 326 aa6.91□□□□□ -1.3
COPS3-208ENST00000486032 GYG1P46976 350 aa6.91□□□□□ -1.3
COPS3-208ENST00000486032 MARSP56192 900 aaKnown RBP6.91□□□□□ -1.3
COPS3-208ENST00000486032 PUM3Q15397 648 aaKnown RBP6.91□□□□□ -1.3
COPS3-208ENST00000486032 TNNI3KQ59H18 835 aa6.91□□□□□ -1.3
COPS3-208ENST00000486032 AACSQ86V21 672 aa6.91□□□□□ -1.3
COPS3-208ENST00000486032 VPS37DQ86XT2 251 aa6.91□□□□□ -1.3
COPS3-208ENST00000486032 CLASRPQ8N2M8 674 aaKnown RBP6.91□□□□□ -1.3
COPS3-208ENST00000486032 Q8N3U1 123 aa6.91□□□□□ -1.3
COPS3-208ENST00000486032 LARGE2Q8N3Y3 721 aa6.91□□□□□ -1.3
COPS3-208ENST00000486032 SVOPQ8N4V2 548 aa6.91□□□□□ -1.3
COPS3-208ENST00000486032 RDH13Q8NBN7 331 aa6.91□□□□□ -1.3
COPS3-208ENST00000486032 GCC1Q96CN9 775 aa6.91□□□□□ -1.3
COPS3-208ENST00000486032 CNTNAP3BQ96NU0 1288 aa6.91□□□□□ -1.3
COPS3-208ENST00000486032 PURBQ96QR8 312 aaKnown RBP6.91□□□□□ -1.3
COPS3-208ENST00000486032 CNTNAP3Q9BZ76 1288 aa6.91□□□□□ -1.3
COPS3-208ENST00000486032 LNPKQ9C0E8 428 aa6.91□□□□□ -1.3
COPS3-208ENST00000486032 DBNDD1Q9H9R9 158 aa6.91□□□□□ -1.3
COPS3-208ENST00000486032 IQSEC3Q9UPP2 1182 aaPredicted RBP6.91□□□□□ -1.3
COPS3-208ENST00000486032 JAG2Q9Y219 1238 aa6.91□□□□□ -1.3
COPS3-208ENST00000486032 AKAP2Q9Y2D5 859 aa6.91□□□□□ -1.3
COPS3-208ENST00000486032 LEMD3Q9Y2U8 911 aa6.91□□□□□ -1.3
COPS3-208ENST00000486032 FPGT-TNNI3KV9GXZ4 949 aa6.91□□□□□ -1.3
COPS3-208ENST00000486032 ZNF646O15015 1829 aaPredicted RBP6.91□□□□□ -1.3
COPS3-208ENST00000486032 IARSP41252 1262 aaKnown RBP6.9□□□□□ -1.3
COPS3-208ENST00000486032 KRT76Q01546 638 aa6.9□□□□□ -1.3
COPS3-208ENST00000486032 CHAF1AQ13111 956 aaPredicted RBP6.9□□□□□ -1.3
COPS3-208ENST00000486032 UBE4AQ14139 1066 aa6.9□□□□□ -1.3
COPS3-208ENST00000486032 CAVIN4Q5BKX8 364 aa6.9□□□□□ -1.3
COPS3-208ENST00000486032 ERICH6BQ5W0A0 696 aa6.9□□□□□ -1.3
COPS3-208ENST00000486032 ZNF385CQ66K41 422 aaPredicted RBP6.9□□□□□ -1.3
COPS3-208ENST00000486032 RNF19BQ6ZMZ0 732 aa6.9□□□□□ -1.3
COPS3-208ENST00000486032 TXNRD3Q86VQ6 643 aa6.9□□□□□ -1.3
COPS3-208ENST00000486032 SKAP1Q86WV1 359 aa6.9□□□□□ -1.3
COPS3-208ENST00000486032 NIM1KQ8IY84 436 aa6.9□□□□□ -1.3
COPS3-208ENST00000486032 C16orf71Q8IYS4 520 aaPredicted RBP6.9□□□□□ -1.3
COPS3-208ENST00000486032 VGLL2Q8N8G2 317 aa6.9□□□□□ -1.3
COPS3-208ENST00000486032 LPIN2Q92539 896 aa6.9□□□□□ -1.3
COPS3-208ENST00000486032 EAF2Q96CJ1 260 aaPredicted RBP6.9□□□□□ -1.3
COPS3-208ENST00000486032 SCARF2Q96GP6 870 aaPredicted RBP6.9□□□□□ -1.3
COPS3-208ENST00000486032 XAGE2Q96GT9 111 aa6.9□□□□□ -1.3
COPS3-208ENST00000486032 DBNDD2Q9BQY9 259 aa6.9□□□□□ -1.3
COPS3-208ENST00000486032 TLR7Q9NYK1 1049 aaKnown RBP6.9□□□□□ -1.3
COPS3-208ENST00000486032 PODXL2Q9NZ53 605 aa6.9□□□□□ -1.3
COPS3-208ENST00000486032 SCN9AQ15858 1988 aa6.89□□□□□ -1.31
COPS3-208ENST00000486032 SHTN1A0MZ66 631 aa6.89□□□□□ -1.31
COPS3-208ENST00000486032 ECE2O60344 883 aa6.89□□□□□ -1.31
COPS3-208ENST00000486032 FGFR2P21802 821 aa6.89□□□□□ -1.31
COPS3-208ENST00000486032 HIBADHP31937 336 aaKnown RBP6.89□□□□□ -1.31
COPS3-208ENST00000486032 PHKA1P46020 1223 aa6.89□□□□□ -1.31
COPS3-208ENST00000486032 GRIPAP1Q4V328 841 aa6.89□□□□□ -1.31
COPS3-208ENST00000486032 TTC39AQ5SRH9 613 aa6.89□□□□□ -1.31
COPS3-208ENST00000486032 LCE3BQ5TA77 95 aa6.89□□□□□ -1.31
COPS3-208ENST00000486032 TSHZ3Q63HK5 1081 aa6.89□□□□□ -1.31
COPS3-208ENST00000486032 CENPQQ7L2Z9 268 aaPredicted RBP6.89□□□□□ -1.31
COPS3-208ENST00000486032 SMC5Q8IY18 1101 aa6.89□□□□□ -1.31
COPS3-208ENST00000486032 OTUD7AQ8TE49 926 aaPredicted RBP6.89□□□□□ -1.31
COPS3-208ENST00000486032 PSMD1Q99460 953 aa6.89□□□□□ -1.31
COPS3-208ENST00000486032 KCNQ5Q9NR82 932 aa6.89□□□□□ -1.31
COPS3-208ENST00000486032 ZNF609O15014 1411 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms